Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20246
(368 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17; Eukaryo... 129 2e-29
UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonch... 115 3e-25
UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86; Eukaryo... 106 1e-22
UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55; Eukaryo... 103 8e-22
UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40; Eukar... 95 5e-19
UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1; Dictyost... 92 3e-18
UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lambl... 85 5e-16
UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6; Eukary... 84 7e-16
UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A, S... 83 2e-15
UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S riboso... 83 2e-15
UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2; E... 82 4e-15
UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3; Archaea... 76 2e-13
UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, wh... 71 9e-12
UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2; Thermoprotei... 70 2e-11
UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14; Euryar... 68 5e-11
UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillard... 62 4e-09
UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1; Nanoarc... 60 1e-08
UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal ... 57 9e-08
UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4; Methano... 57 1e-07
UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2; Methano... 56 2e-07
UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2; environ... 53 1e-06
UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S riboso... 53 2e-06
UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella... 52 4e-06
UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8; Thermop... 52 4e-06
UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2; Tr... 51 6e-06
UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1; ... 50 1e-05
UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 49 2e-05
UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3; Thermoto... 49 3e-05
UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5; Thermop... 49 3e-05
UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40; Bacteri... 49 3e-05
UniRef50_Q661C7 Cluster: 50S ribosomal protein L6; n=9; cellular... 49 3e-05
UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus N... 48 4e-05
UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1; Encephal... 48 5e-05
UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132, w... 46 2e-04
UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=... 45 4e-04
UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22; Bacteri... 45 4e-04
UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7; Bacilli|... 44 7e-04
UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellula... 44 9e-04
UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular... 43 0.002
UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5; Halobac... 43 0.002
UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1; Thermop... 42 0.005
UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108; Proteo... 42 0.005
UniRef50_P44347 Cluster: 50S ribosomal protein L6; n=18; Gammapr... 41 0.006
UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34; Bacteri... 41 0.006
UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4; Euryarc... 41 0.006
UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1; Streptoc... 41 0.008
UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 41 0.008
UniRef50_Q2JIL3 Cluster: 50S ribosomal protein L6; n=44; cellula... 40 0.019
UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellula... 40 0.019
UniRef50_Q9ZCS0 Cluster: 50S ribosomal protein L6; n=10; Rickett... 39 0.025
UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16; Firmicu... 39 0.025
UniRef50_O23049 Cluster: 50S ribosomal protein L6, chloroplast p... 39 0.025
UniRef50_Q6KI40 Cluster: 50S ribosomal protein l6; n=4; Mycoplas... 39 0.033
UniRef50_Q7VQD3 Cluster: 50S ribosomal subunit protein L6; n=2; ... 38 0.044
UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster ye... 38 0.044
UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 38 0.044
UniRef50_Q9ZI38 Cluster: 50S ribosomal protein L6; n=2; Aquifex ... 38 0.044
UniRef50_Q9A8T8 Cluster: 50S ribosomal protein L6; n=16; Bacteri... 38 0.058
UniRef50_Q98PZ7 Cluster: 50S ribosomal protein L6; n=29; Bacteri... 37 0.10
UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6; Bacteria... 37 0.13
UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3; Thermop... 37 0.13
UniRef50_Q6E783 Cluster: Ribosomal protein L6; n=5; Oomycetes|Re... 36 0.18
UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S riboso... 36 0.24
UniRef50_Q8DML8 Cluster: 50S ribosomal protein L6; n=4; cellular... 36 0.24
UniRef50_Q8KAI6 Cluster: 50S ribosomal protein L6; n=15; Bacteri... 36 0.24
UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3; Planctom... 36 0.31
UniRef50_O67565 Cluster: 50S ribosomal protein L6; n=1; Aquifex ... 36 0.31
UniRef50_Q1XDI8 Cluster: Chloroplast 50S ribosomal protein L6; n... 36 0.31
UniRef50_A5K452 Cluster: Pv-fam-d protein; n=1; Plasmodium vivax... 35 0.54
UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3; ... 34 0.72
UniRef50_Q1ZBZ7 Cluster: 50S ribosomal protein L6; n=1; Psychrom... 34 0.95
UniRef50_A0YJS9 Cluster: 50S ribosomal protein L6; n=2; cellular... 34 0.95
UniRef50_Q7NEG7 Cluster: 50S ribosomal protein L6; n=19; Bacteri... 34 0.95
UniRef50_A6DRC5 Cluster: 50S ribosomal protein L6; n=1; Lentisph... 33 1.7
UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73; Proteob... 33 1.7
UniRef50_O21255 Cluster: Mitochondrial 60S ribosomal protein L6;... 33 2.2
UniRef50_Q6Q8X3 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 32 2.9
UniRef50_P47412 Cluster: 50S ribosomal protein L6; n=6; Mycoplas... 32 2.9
UniRef50_Q74L75 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 32 2.9
UniRef50_A5WFU5 Cluster: Pyruvate oxidase; n=1; Psychrobacter sp... 31 5.1
UniRef50_Q5CV19 Cluster: Putative uncharacterized protein; n=2; ... 31 6.7
UniRef50_A5K579 Cluster: Putative uncharacterized protein; n=3; ... 31 6.7
UniRef50_A2F8M2 Cluster: Adaptin N terminal region family protei... 31 6.7
UniRef50_P41843 Cluster: Uncharacterized protein T20B12.3; n=2; ... 31 6.7
UniRef50_Q63XR8 Cluster: Error-prone DNA polymerase; n=22; Burkh... 31 6.7
UniRef50_UPI000049A156 Cluster: ankyrin; n=9; Entamoeba histolyt... 31 8.9
UniRef50_A4XRB4 Cluster: Transcriptional regulator, LysR family;... 31 8.9
UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10; Firmicu... 31 8.9
UniRef50_Q2IJ73 Cluster: 50S ribosomal protein L6; n=6; Bacteria... 31 8.9
UniRef50_Q6BTT3 Cluster: GPI-anchored wall transfer protein 1; n... 31 8.9
>UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17;
Eukaryota|Rep: 60S ribosomal protein L9 - Drosophila
melanogaster (Fruit fly)
Length = 190
Score = 129 bits (311), Expect = 2e-29
Identities = 60/84 (71%), Positives = 70/84 (83%)
Frame = +2
Query: 2 NQKVKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELA 181
NQ VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKVEKWFG+KKELA
Sbjct: 7 NQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFGTKKELA 66
Query: 182 AVRTVCSHVENMIKGVTKGFQYKM 253
AVRTVCSH+ENMIKGVT GFQYKM
Sbjct: 67 AVRTVCSHIENMIKGVTFGFQYKM 90
Score = 64.9 bits (151), Expect = 4e-10
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +1
Query: 256 AVYAHFPINXVTTEGNSIIEIRNXLGEKXIRRVKMAP 366
AVYAHFPIN VT+E N++IEIRN LGEK IRRV+MAP
Sbjct: 92 AVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAP 128
>UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonchus
contortus|Rep: 60S ribosomal protein L9 - Haemonchus
contortus (Barber pole worm)
Length = 141
Score = 115 bits (276), Expect = 3e-25
Identities = 50/84 (59%), Positives = 65/84 (77%)
Frame = +2
Query: 2 NQKVKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELA 181
N V P G+T VK+R+V V GPRG LKR+F+HL +++ V L+V KWFG +KE+A
Sbjct: 7 NDTVDFPDGVTFTVKNRVVHVTGPRGTLKRDFRHLHMEMERVGKNQLRVRKWFGVRKEIA 66
Query: 182 AVRTVCSHVENMIKGVTKGFQYKM 253
A+RTVCSH++NMIKGVTKGF+YKM
Sbjct: 67 AIRTVCSHIQNMIKGVTKGFRYKM 90
Score = 45.2 bits (102), Expect = 4e-04
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +1
Query: 256 AVYAHFPINXVTTEGNSIIEIRNXLGEKXIRRVKM 360
+VYAHFPIN +G +EIRN LGEK +R V +
Sbjct: 92 SVYAHFPINVTLQDGGRTVEIRNFLGEKIVRPVPL 126
>UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86;
Eukaryota|Rep: 60S ribosomal protein L9 - Homo sapiens
(Human)
Length = 192
Score = 106 bits (255), Expect = 1e-22
Identities = 47/86 (54%), Positives = 66/86 (76%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 NQKVKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL--LKVEKWFGSKKE 175
NQ V IP + + +K R V VKGPRG L+R+F H+ V++ ++ + L+V+KW+G++KE
Sbjct: 7 NQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKWWGNRKE 66
Query: 176 LAAVRTVCSHVENMIKGVTKGFQYKM 253
LA VRT+CSHV+NMIKGVT GF+YKM
Sbjct: 67 LATVRTICSHVQNMIKGVTLGFRYKM 92
Score = 56.8 bits (131), Expect = 1e-07
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = +1
Query: 256 AVYAHFPINXVTTEGNSIIEIRNXLGEKXIRRVKMAP 366
+VYAHFPIN V E S++EIRN LGEK IRRV+M P
Sbjct: 94 SVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRP 130
>UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55;
Eukaryota|Rep: 60S ribosomal protein L9 - Oryza sativa
subsp. japonica (Rice)
Length = 190
Score = 103 bits (248), Expect = 8e-22
Identities = 46/97 (47%), Positives = 71/97 (73%), Gaps = 1/97 (1%)
Frame = +2
Query: 2 NQKVKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-RLLKVEKWFGSKKEL 178
++ ++IP G+TV V +++VTV+GPRG L RNFKHL +D +++ R L+V+ WFG+++ +
Sbjct: 7 SETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLEGGRKLQVDAWFGTRRTM 66
Query: 179 AAVRTVCSHVENMIKGVTKGFQYKMXLCMLTSPLTXS 289
AA+RT SHV+N+I GVTKG++YKM P+ S
Sbjct: 67 AAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINAS 103
Score = 49.6 bits (113), Expect = 2e-05
Identities = 22/34 (64%), Positives = 25/34 (73%)
Frame = +1
Query: 259 VYAHFPINXVTTEGNSIIEIRNXLGEKXIRRVKM 360
VYAHFPIN T N+ IEIRN LGEK +R+V M
Sbjct: 94 VYAHFPINASITNSNTAIEIRNFLGEKKVRKVDM 127
>UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 191
Score = 94.7 bits (225), Expect = 5e-19
Identities = 44/83 (53%), Positives = 61/83 (73%)
Frame = +2
Query: 5 QKVKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 184
Q++++P G+TV +KSR+V V GPRG L +N KH+ V VN +L+KV G +K +AA
Sbjct: 8 QQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNGGRKHVAA 67
Query: 185 VRTVCSHVENMIKGVTKGFQYKM 253
+RTV S V+NMI GVTKG++YKM
Sbjct: 68 LRTVKSLVDNMITGVTKGYKYKM 90
Score = 40.7 bits (91), Expect = 0.008
Identities = 20/34 (58%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +1
Query: 259 VYAHFPINX--VTTEGNSIIEIRNXLGEKXIRRV 354
VYAHFPIN V +G IE+RN LG+K IR V
Sbjct: 93 VYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNV 126
>UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L9 - Dictyostelium discoideum AX4
Length = 206
Score = 92.3 bits (219), Expect = 3e-18
Identities = 40/84 (47%), Positives = 58/84 (69%)
Frame = +2
Query: 29 LTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHV 208
+TV VK R V V GPRG L ++F H +VDI +V + L V+ WFG++K++A ++T+ S +
Sbjct: 34 VTVDVKGRSVKVTGPRGTLSKSFDHASVDINLVGKKELTVDLWFGNRKQIACIKTITSII 93
Query: 209 ENMIKGVTKGFQYKMXLCMLTSPL 280
ENMI GVTKG++YKM P+
Sbjct: 94 ENMITGVTKGYEYKMRFVYAHFPI 117
Score = 50.8 bits (116), Expect = 8e-06
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = +1
Query: 259 VYAHFPINXVTTEGNSIIEIRNXLGEKXIRRVKM 360
VYAHFPIN T+G ++EIRN GEK +RR+++
Sbjct: 111 VYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIEL 144
>UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_108_35846_36403 - Giardia lamblia
ATCC 50803
Length = 185
Score = 84.6 bits (200), Expect = 5e-16
Identities = 40/90 (44%), Positives = 53/90 (58%)
Frame = +2
Query: 11 VKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 190
+K+P + + R+VTVKG +G L R+F H +DI N + V WF K A R
Sbjct: 9 IKVPTDVECTINKRVVTVKGKKGTLVRDFSHAPLDITHANDTI-SVAVWFPRGKRNALPR 67
Query: 191 TVCSHVENMIKGVTKGFQYKMXLCMLTSPL 280
T+CSH+ENM KGVT GF+YKM L P+
Sbjct: 68 TICSHIENMFKGVTYGFEYKMRLAYAHFPI 97
Score = 35.9 bits (79), Expect = 0.24
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 262 YAHFPINXVTTEGNSIIEIRNXLGEKXIRRVKMAP 366
YAHFPI + N IEIRN + + RR++ P
Sbjct: 92 YAHFPIAATVVDNNKAIEIRNFMHQIKTRRIECLP 126
>UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 190
Score = 84.2 bits (199), Expect = 7e-16
Identities = 40/93 (43%), Positives = 61/93 (65%)
Frame = +2
Query: 2 NQKVKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELA 181
++ + IP G+TV +K+R VTV GPRG LK+N +H+ ++++ +K W GS+K A
Sbjct: 8 DETLTIPKGVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKK-QGNTIKFIVWHGSRKHNA 66
Query: 182 AVRTVCSHVENMIKGVTKGFQYKMXLCMLTSPL 280
+R+V S + NMI GVT+GF+YKM L P+
Sbjct: 67 CIRSVYSIINNMIIGVTQGFRYKMRLVYAHFPI 99
Score = 47.2 bits (107), Expect = 1e-04
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +1
Query: 259 VYAHFPINXVTTEGNSIIEIRNXLGEKXIRRVKMAP 366
VYAHFPIN TE +++EIRN LGE+ R +K P
Sbjct: 93 VYAHFPININLTENGTVVEIRNFLGERITRVIKCLP 128
>UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A,
Solution Structure Of The N-Terminal Domain Of Human
Ribosomal Protein L9; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to Chain A, Solution Structure Of The
N-Terminal Domain Of Human Ribosomal Protein L9 -
Ornithorhynchus anatinus
Length = 143
Score = 82.6 bits (195), Expect = 2e-15
Identities = 39/81 (48%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Frame = +2
Query: 2 NQKVKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLK--VEKWFGSKKE 175
NQ V IP + + +K R V VKGP+G L R+F H+ V++ ++ +L K V+KW+G++KE
Sbjct: 7 NQTVDIPANIGIILKGRTVIVKGPQGSLHRDFNHINVELSLLGKKLKKFHVDKWWGNRKE 66
Query: 176 LAAVRTVCSHVENMIKGVTKG 238
LA V T+CS V+N IK VT G
Sbjct: 67 LATVHTICSPVQNTIKWVTLG 87
>UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S ribosomal
protein L9, partial; n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L9, partial - Macaca
mulatta
Length = 179
Score = 82.6 bits (195), Expect = 2e-15
Identities = 43/94 (45%), Positives = 59/94 (62%), Gaps = 4/94 (4%)
Frame = +2
Query: 11 VKIPX-GLTVHV--KSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-RLLKVEKWFGSKKEL 178
++IP G TV V KSR + V G G L+R F+H+ VD+++V R + VE WFG K
Sbjct: 69 IQIPEDGSTVKVTLKSRHIVVSGKYGKLERTFRHIPVDMKLVEDGRKITVEMWFGLTKNK 128
Query: 179 AAVRTVCSHVENMIKGVTKGFQYKMXLCMLTSPL 280
A +RTVCSH+ENMI GV + +QYK+ P+
Sbjct: 129 ACIRTVCSHIENMITGVRQRYQYKLRFVYAHFPI 162
Score = 34.3 bits (75), Expect = 0.72
Identities = 16/24 (66%), Positives = 16/24 (66%)
Frame = +1
Query: 259 VYAHFPINXVTTEGNSIIEIRNXL 330
VYAHFPIN T S IEIRN L
Sbjct: 156 VYAHFPINSNITNDGSTIEIRNFL 179
>UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L9 - Entamoeba histolytica HM-1:IMSS
Length = 197
Score = 81.8 bits (193), Expect = 4e-15
Identities = 39/102 (38%), Positives = 63/102 (61%), Gaps = 9/102 (8%)
Frame = +2
Query: 5 QKVKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI-------RMVNPR--LLKVEKW 157
+ V IP G+ + + + + V GPRG L R F+H VDI + P+ ++ ++ W
Sbjct: 9 EHVVIPEGVNIEINRKNIKVTGPRGSLTREFQHPKVDIYASKLVVKKEGPKENVVVIDMW 68
Query: 158 FGSKKELAAVRTVCSHVENMIKGVTKGFQYKMXLCMLTSPLT 283
+G++++ A VRT+ SH++NMI GVTKG+QYKM + P+T
Sbjct: 69 YGNRRDSAVVRTIASHIKNMITGVTKGYQYKMRVVYAHFPVT 110
Score = 39.1 bits (87), Expect = 0.025
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +1
Query: 259 VYAHFPINXVTTEGNSIIEIRNXLGEKXIRRVKM 360
VYAHFP+ V + I+++N LGEK R ++M
Sbjct: 103 VYAHFPVTLVIADDGKSIQVQNFLGEKRTRHIEM 136
>UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3;
Archaea|Rep: 50S ribosomal protein L6P - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 184
Score = 75.8 bits (178), Expect = 2e-13
Identities = 37/93 (39%), Positives = 61/93 (65%)
Frame = +2
Query: 5 QKVKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 184
++++IP G+ V V+ V VKGP+G L+R K+ V I + +++ + K F KK++A
Sbjct: 9 EEIEIPEGVEVTVEGNTVKVKGPKGELQRELKYPGVQIFTEDGKVV-IYKEFPRKKDVAI 67
Query: 185 VRTVCSHVENMIKGVTKGFQYKMXLCMLTSPLT 283
VRT +H+ NMIKGVT+GF+Y++ + P+T
Sbjct: 68 VRTFKAHINNMIKGVTEGFKYRLKVVYSHFPMT 100
>UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=6; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 196
Score = 70.5 bits (165), Expect = 9e-12
Identities = 38/101 (37%), Positives = 59/101 (58%), Gaps = 9/101 (8%)
Frame = +2
Query: 5 QKVKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM---VNPR------LLKVEKW 157
+ V IP + + KS++V VKGPRG L +NF+H A+DI++ VN + + V W
Sbjct: 8 EHVPIPEKIEITQKSKVVKVKGPRGELTKNFRHSALDIQVQKKVNKKNNVAKSRVSVRMW 67
Query: 158 FGSKKELAAVRTVCSHVENMIKGVTKGFQYKMXLCMLTSPL 280
+K+ V +V S + NMI+GVT G+++KM L P+
Sbjct: 68 QSYRKQRCQVNSVASQIRNMIRGVTTGYKFKMVLAYAHFPI 108
Score = 36.3 bits (80), Expect = 0.18
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = +1
Query: 262 YAHFPINXVTTEGNSIIEIRNXLGEKXIRRVKMAP 366
YAHFPI +EI+N LGEK IR +K P
Sbjct: 103 YAHFPIIINLIGNGQGVEIKNFLGEKIIRTIKCLP 137
>UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2;
Thermoprotei|Rep: Ribosomal protein L6 - Thermofilum
pendens (strain Hrk 5)
Length = 191
Score = 69.7 bits (163), Expect = 2e-11
Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Frame = +2
Query: 5 QKVKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLA-VDIRMVNPRLLKVEKWFGSKKELA 181
+ V IP G+ VHV + V V+GP G ++++F H + IR V + VE + +KK+ A
Sbjct: 8 ESVPIPEGVKVHVNGKRVEVEGPLGKVEKDFSHARRISIR-VEGNSVVVETFHATKKDYA 66
Query: 182 AVRTVCSHVENMIKGVTKGFQYKMXLCMLTSPLT 283
V T+ S + NMI GVTKG++YK+ + P++
Sbjct: 67 LVGTIASIINNMIIGVTKGYRYKLKIVYAHFPMS 100
>UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Pyrococcus furiosus
Length = 184
Score = 68.1 bits (159), Expect = 5e-11
Identities = 35/93 (37%), Positives = 57/93 (61%)
Frame = +2
Query: 5 QKVKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 184
++V+IP G+ V V+ V VKGP+G L+R F + I + ++ + K F +K++A
Sbjct: 9 EEVEIPEGVEVTVEGYKVKVKGPKGELEREFFWPGIQIFTEDGNVV-IYKDFPRRKDVAI 67
Query: 185 VRTVCSHVENMIKGVTKGFQYKMXLCMLTSPLT 283
RT +H+ NMIKGVT+GF YK+ + P++
Sbjct: 68 ARTFAAHIRNMIKGVTEGFTYKLKVVYSHFPIS 100
Score = 35.9 bits (79), Expect = 0.24
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +1
Query: 259 VYAHFPINXVTTEGNSIIEIRNXLGEKXIRRVKMAP 366
VY+HFPI+ V +G+ +I I N LGEK R+ K+ P
Sbjct: 93 VYSHFPIS-VKVQGDEVI-IENFLGEKAPRKAKILP 126
>UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillardia
theta|Rep: 60S ribosomal protein L9 - Guillardia theta
(Cryptomonas phi)
Length = 188
Score = 61.7 bits (143), Expect = 4e-09
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +2
Query: 5 QKVKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL-LKVEKWFGSKKELA 181
+K+KIP + + K+R ++ G G + R+F+ + IR + + + W KK+LA
Sbjct: 8 RKIKIPKNVKIKTKARKISATGSLGSIIRSFEKTQISIRYFEKKKEIILLLWMAGKKQLA 67
Query: 182 AVRTVCSHVENMIKGVTKGFQY 247
+ T+ SH+ NMI GV+ GF+Y
Sbjct: 68 KLNTIASHITNMIVGVSLGFEY 89
Score = 47.2 bits (107), Expect = 1e-04
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +1
Query: 259 VYAHFPINXVTTEGNSIIEIRNXLGEKXIRRVKM 360
+YAHFPIN T+ S +EIRN LGEK IR++ M
Sbjct: 94 IYAHFPINLSITDDGSCLEIRNFLGEKRIRKIYM 127
>UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L6P -
Nanoarchaeum equitans
Length = 192
Score = 60.5 bits (140), Expect = 1e-08
Identities = 26/91 (28%), Positives = 53/91 (58%)
Frame = +2
Query: 8 KVKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 187
++ IP + V ++ ++ V GP+G ++R F H + + VN + +E +F +++E +
Sbjct: 9 EIPIPENVKVSYENNILKVSGPKGEVERKFYHPLIKLS-VNDNKIILETYFATRREKRLI 67
Query: 188 RTVCSHVENMIKGVTKGFQYKMXLCMLTSPL 280
T SH++NM++GV F Y++ +C P+
Sbjct: 68 NTWRSHIKNMLEGVQNPFVYRLKVCYTHFPM 98
>UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal
protein L9; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L9 - Rattus norvegicus
Length = 77
Score = 57.2 bits (132), Expect = 9e-08
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Frame = +2
Query: 2 NQKVKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL--LKVEKWFGSKKE 175
NQ VKIP + +V VK RG L+R+F H+ +++R++ R L+V+KW + K
Sbjct: 7 NQAVKIPEN------AHIVIVKDTRGTLQRDFNHINIELRLLAKRKKQLQVDKWLKTMK- 59
Query: 176 LAAVRTVCSHVENMIKGV 229
LA T+ SHV+NMIK V
Sbjct: 60 LATAHTIYSHVQNMIKRV 77
>UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4;
Methanomicrobia|Rep: 50S ribosomal protein L6P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 176
Score = 56.8 bits (131), Expect = 1e-07
Identities = 28/90 (31%), Positives = 53/90 (58%)
Frame = +2
Query: 11 VKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 190
++IP G++V + + T KGP+G ++R F + + I + ++ V+ K++ A V
Sbjct: 9 IEIPEGVSVSLSQDVFTAKGPKGTVERTFWYPGIKIEVREGEVV-VDAESSRKEQKAMVG 67
Query: 191 TVCSHVENMIKGVTKGFQYKMXLCMLTSPL 280
T SH++N+I GV++GF+ KM + P+
Sbjct: 68 TFASHLKNLIIGVSEGFECKMNIVYAHFPM 97
>UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L6P -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 174
Score = 56.4 bits (130), Expect = 2e-07
Identities = 30/92 (32%), Positives = 53/92 (57%)
Frame = +2
Query: 5 QKVKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 184
++V+IP G+ V + ++TV GP+G L R+ + +D+ MV + V K+ LA
Sbjct: 5 RQVEIPPGVDVTLDGGVLTVSGPKGTLVRDMRFPQIDL-MVEGGEVVVSTASEKKRILAM 63
Query: 185 VRTVCSHVENMIKGVTKGFQYKMXLCMLTSPL 280
T+ +H +NMI+GV G++Y+M + P+
Sbjct: 64 TGTLEAHAKNMIRGVADGYEYRMKVVYSHFPI 95
>UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2;
environmental samples|Rep: 50S ribosomal protein L6P -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 188
Score = 53.2 bits (122), Expect = 1e-06
Identities = 31/92 (33%), Positives = 46/92 (50%)
Frame = +2
Query: 8 KVKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 187
K+ +P G+T V VTV L R F+H +++R + L +V KKE A
Sbjct: 10 KISLPEGVTAAVNGNDVTVAKDGNSLTREFRHPRIEVRDSSGEL-EVFVNLPRKKEKALA 68
Query: 188 RTVCSHVENMIKGVTKGFQYKMXLCMLTSPLT 283
T +H+ NM +GV GF+YK+ P+T
Sbjct: 69 GTWAAHLTNMARGVDSGFEYKLKAVYSHFPMT 100
>UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=3; Euarchontoglires|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 145
Score = 52.8 bits (121), Expect = 2e-06
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = +2
Query: 170 KELAAVRTVCSHVENMIKGVTKGFQYKMXLCMLTSPLTXSPLR 298
KELA VRT+CSHV+NMIKGV+ GF+YK+ PL +R
Sbjct: 30 KELATVRTICSHVQNMIKGVSLGFRYKVRSVYAHFPLNVVQMR 72
>UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella
natans|Rep: Ribosomal protein L9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 190
Score = 51.6 bits (118), Expect = 4e-06
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Frame = +2
Query: 11 VKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI--RMVNPRLLKVEKWFGSKKELAA 184
+ +P + + +K + + KG G L + F + V+I + + L V ++ +K A
Sbjct: 10 INVPKDVKIRIKEKTIYTKGINGELSKKFNNKNVNIIYKKNDSNSLIVRCYYNNKSSSAI 69
Query: 185 VRTVCSHVENMIKGVTKGFQYKMXLCMLTSPLT 283
VRT+ S + NMI GV+KGF Y + + P++
Sbjct: 70 VRTITSIIYNMIIGVSKGFTYLLKIVYSHFPIS 102
>UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8;
Thermoprotei|Rep: 50S ribosomal protein L6P - Sulfolobus
acidocaldarius
Length = 189
Score = 51.6 bits (118), Expect = 4e-06
Identities = 24/94 (25%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Frame = +2
Query: 5 QKVKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWFGSKKELA 181
++++IP + V +++ ++ VKGP+G + ++F + A IR+ +N + +E F +++ A
Sbjct: 11 EEIQIPDKVKVSLENNVLKVKGPKGEVIKDFSY-AKGIRIQLNEGKIILETTFADRRKKA 69
Query: 182 AVRTVCSHVENMIKGVTKGFQYKMXLCMLTSPLT 283
+ ++ +H++NMI G G++Y + + P++
Sbjct: 70 LLYSIIAHIKNMITGTINGYRYYLKVISTHFPIS 103
Score = 32.3 bits (70), Expect = 2.9
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 259 VYAHFPINXVTTEGNSIIEIRNXLGEKXIRRVKMAP 366
+ HFPI+ V G+ + ++ N +GEK IRR K+ P
Sbjct: 96 ISTHFPIS-VKVSGDEV-QVSNLIGEKNIRRAKILP 129
>UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 197
Score = 51.2 bits (117), Expect = 6e-06
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Frame = +2
Query: 14 KIPXGLTVHVKSRLVTVK--GPR----GVLKRNFKHLAVDIRM-VNPRLLKVEKWFGSKK 172
KIP + VKS +VT++ P+ L ++ HL +D N + WFG++K
Sbjct: 12 KIPENIKCTVKSGVVTIEHQDPKDKKTSKLVKDLSHLKLDFEYDENDHQIVARCWFGNRK 71
Query: 173 ELAAVRTVCSHVENMIKGVTKGFQYKM 253
LA + T+ V+NMI GVT G++YKM
Sbjct: 72 LLARIGTLFGIVKNMITGVTLGWRYKM 98
>UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 252
Score = 50.0 bits (114), Expect = 1e-05
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Frame = +2
Query: 80 VLKRNFKHLAVDIRMVNP---RLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYK 250
V +++ KH+ +D R++ + +K W +K A +RT + V NMIKGVT GFQYK
Sbjct: 92 VSQQSLKHMNLDARIIKSPAGQKIKFVVWHAGRKHAACLRTAQACVANMIKGVTVGFQYK 151
Query: 251 M 253
M
Sbjct: 152 M 152
Score = 43.6 bits (98), Expect = 0.001
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = +1
Query: 256 AVYAHFPINXVTTEGNSIIEIRNXLGEKXIRRVKM 360
AVYAHFPIN + EIRN LGEK +R + M
Sbjct: 154 AVYAHFPINIIIAGDKKSAEIRNFLGEKRVRNIAM 188
Score = 31.5 bits (68), Expect = 5.1
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 17 IPXGLTVHVKSRLVTVKGPRGVLKRN 94
+P ++V V SR+ TVKGPRG L ++
Sbjct: 12 VPADVSVSVSSRVFTVKGPRGSLTKS 37
>UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6)
Length = 179
Score = 49.2 bits (112), Expect = 2e-05
Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +2
Query: 11 VKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPR-LLKVEKWFGSKKELAAV 187
VK+P G+ V + +L++VKGP+G L+ H +V++ +V L+ G ++ A
Sbjct: 9 VKLPSGVEVKLVGQLLSVKGPKGTLEL-IIHSSVEVEIVEEAGELRFAARNGDQQTRAMA 67
Query: 188 RTVCSHVENMIKGVTKGFQYKMXL 259
T + V NM++GV++GF+ K+ L
Sbjct: 68 GTTRALVNNMVQGVSQGFERKLQL 91
>UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3;
Thermotogaceae|Rep: 50S ribosomal protein L6 - Petrotoga
mobilis SJ95
Length = 186
Score = 48.8 bits (111), Expect = 3e-05
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Frame = +2
Query: 17 IPXGLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIRMVNPRLLK----VEKWFGSKKELA 181
IP G+ + V + + +KG G L N ++L VD R N ++K V K +K L
Sbjct: 13 IPDGVELSVDGQTIKIKGKNGELSLNLPEYLEVD-RDNNELMIKTKEGVVKRSSDEKRLK 71
Query: 182 AVR-TVCSHVENMIKGVTKGFQYKMXL 259
A+R T SHV NMIKGVT+G++ ++ +
Sbjct: 72 ALRGTFTSHVRNMIKGVTEGYKKELEI 98
>UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L6P -
Pyrobaculum aerophilum
Length = 196
Score = 48.8 bits (111), Expect = 3e-05
Identities = 28/97 (28%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Frame = +2
Query: 5 QKVKIPXGLTVHVKSR-----LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSK 169
++V+IP G++V ++ +V VKGP G + + FK+ V + + + +++ +E + K
Sbjct: 8 EEVEIPKGVSVSIERTGPFDYIVKVKGPLGEVTKEFKNTPVVMSLQDGKIV-MEVFKARK 66
Query: 170 KELAAVRTVCSHVENMIKGVTKGFQYKMXLCMLTSPL 280
+E A + T ++NM GVT+G++YK+ + P+
Sbjct: 67 REYAILGTYKGILKNMFLGVTRGWRYKLKVIYTHFPM 103
>UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40;
Bacteria|Rep: 50S ribosomal protein L6 - Oceanobacillus
iheyensis
Length = 178
Score = 48.8 bits (111), Expect = 3e-05
Identities = 29/83 (34%), Positives = 46/83 (55%)
Frame = +2
Query: 11 VKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 190
V+IP G+ + + + VTVKGP+G L R H + I + +L VE+ K+ A
Sbjct: 9 VEIPEGVELKLDNNTVTVKGPKGELSREL-HPDMKIN-IEDNVLTVERPSDHKEHRALHG 66
Query: 191 TVCSHVENMIKGVTKGFQYKMXL 259
T S + NM+ GV+KGF+ + +
Sbjct: 67 TTRSLINNMVIGVSKGFEKSLEI 89
>UniRef50_Q661C7 Cluster: 50S ribosomal protein L6; n=9; cellular
organisms|Rep: 50S ribosomal protein L6 - Borrelia
garinii
Length = 180
Score = 48.8 bits (111), Expect = 3e-05
Identities = 28/83 (33%), Positives = 48/83 (57%)
Frame = +2
Query: 11 VKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 190
+KIP + + VK LV V+G RG L ++ K ++++++ N ++ V + F KK A
Sbjct: 9 IKIPDTVKIDVKGNLVIVEGTRGKLVQDIKD-SINVKVENGSVI-VNRAFNDKKTKAYHG 66
Query: 191 TVCSHVENMIKGVTKGFQYKMXL 259
S + NM+KGVT+GF + +
Sbjct: 67 LYRSLIFNMVKGVTEGFSKSLTI 89
>UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L6
- Candidatus Nitrosopumilus maritimus SCM1
Length = 185
Score = 48.4 bits (110), Expect = 4e-05
Identities = 24/92 (26%), Positives = 51/92 (55%)
Frame = +2
Query: 8 KVKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 187
+V+IP G+TV ++ +GP G +NF+++ V I + + + + ++ K++ A +
Sbjct: 12 QVEIPEGVTVTQNKNMLLFEGPLGKTHKNFRNIPVKIEIADGK-VNLKTIGERKRDYAIL 70
Query: 188 RTVCSHVENMIKGVTKGFQYKMXLCMLTSPLT 283
T S + N+ +G+ +G+ KM + P+T
Sbjct: 71 HTARSIIRNICEGLVEGYTIKMKVVFAHFPIT 102
>UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L9 -
Encephalitozoon cuniculi
Length = 204
Score = 48.0 bits (109), Expect = 5e-05
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = +2
Query: 11 VKIPXGLTVHVKSRLVTVKGPRG-VLKRNFKH-LAVDIRMVNPRLLKVEKWFGSKKELAA 184
VK+P T + ++ T +GP+G +++ +H L DI N +++ W G +K +A
Sbjct: 30 VKVPEDCTATQEGKIFTFQGPKGSIVEDCTRHPLTFDIHEGN---IRIRLWNGKRKAMAL 86
Query: 185 VRTVCSHVENMIKGVTKGFQYKM 253
TV S + N IK VT GF Y M
Sbjct: 87 AITVESLLRNAIKAVTVGFAYTM 109
Score = 37.5 bits (83), Expect = 0.077
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +1
Query: 256 AVYAHFPINXVTTEGNSIIEIRNXLGEKXIRRVKM 360
AVY HF IN E I+ ++N LGEK ++R +M
Sbjct: 111 AVYNHFSINMEIKEDGKILLVKNFLGEKNVKRFRM 145
>UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 167
Score = 46.4 bits (105), Expect = 2e-04
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 9/72 (12%)
Frame = +2
Query: 50 RLVTVKGPRGVLKRNFKHLAVDIRMVNP-------RLLKVE--KWFGSKKELAAVRTVCS 202
+L+ + GPRG+L RNFKH ++DI++ L+K+E K+ V+++ +
Sbjct: 53 KLIMIIGPRGILNRNFKHASLDIQVQKEIKEIKQIGLIKIEYQDVVQYSKQRFQVKSIAA 112
Query: 203 HVENMIKGVTKG 238
++NMI+G+T G
Sbjct: 113 QIKNMIRGITSG 124
>UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=1;
Antonospora locustae|Rep: Large subunit ribosomal
protein L9e - Antonospora locustae (Nosema locustae)
Length = 160
Score = 45.2 bits (102), Expect = 4e-04
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Frame = +2
Query: 5 QKVKIPXGLTVHVKSRLVTVKGPRGVLKRNFKH--LAVDIRMVNPRLLKVEKWFGSKKEL 178
+KV+IP G +V + R++TV+G R R+ H L +D+ + RL ++ +++
Sbjct: 8 EKVEIPEGCSVEILERVMTVRGKRATAVRDLSHFVLTMDVHEGHVRL----RYGMAQQGA 63
Query: 179 AAVRTVCSHVENMIKGVTKGFQYKMXLCMLT 271
VC +N I G G++Y + LC T
Sbjct: 64 QQADYVCICDQNCIVGCMSGYEYTLRLCTST 94
>UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22;
Bacteria|Rep: 50S ribosomal protein L6 -
Thermoanaerobacter tengcongensis
Length = 180
Score = 45.2 bits (102), Expect = 4e-04
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +2
Query: 11 VKIPXGLTVHVK-SRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 187
+ IP G+ V V +VTVKG +G L++ F + V+I + + ++ K K+E A
Sbjct: 9 IPIPKGVEVKVSPDNVVTVKGAKGTLEKKFPPI-VNIEVRDGEVVVTRKG-DDKEERAMH 66
Query: 188 RTVCSHVENMIKGVTKGFQ 244
T + + NM+KGVT+GF+
Sbjct: 67 GTTRAIIANMVKGVTEGFE 85
>UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7;
Bacilli|Rep: 50S ribosomal protein L6 - Bacillus
subtilis
Length = 179
Score = 44.4 bits (100), Expect = 7e-04
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +2
Query: 11 VKIPXGLTVHVK-SRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 187
++IP +TV + + V VKGP+G L R F H ++I+ V +L V + K+ A
Sbjct: 9 LEIPSDVTVTLNDNNTVAVKGPKGELTRTF-HPDMEIK-VEDNVLTVARPSDQKEHRALH 66
Query: 188 RTVCSHVENMIKGVTKGFQYKMXL 259
T S + NM++GV+KGF+ + L
Sbjct: 67 GTTRSLLGNMVEGVSKGFERGLEL 90
>UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellular
organisms|Rep: 50S ribosomal protein L6P - Methanopyrus
kandleri
Length = 204
Score = 44.0 bits (99), Expect = 9e-04
Identities = 25/90 (27%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
Frame = +2
Query: 5 QKVKIPXGLTVHVKSRL-----VTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSK 169
++VKI + + + R VTVKGP+G + + F + V + + + ++ + ++
Sbjct: 21 ERVKIKDDVEIEISQREDRRYEVTVKGPKGEVTKEFYYPDVYLWVEDDEVV-IAATRSNR 79
Query: 170 KELAAVRTVCSHVENMIKGVTKGFQYKMXL 259
++ A + + +++ENM KGVT+G +YK+ L
Sbjct: 80 RQKAILGMIKAYIENMQKGVTEGHEYKLKL 109
>UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Thermotoga
maritima
Length = 184
Score = 43.2 bits (97), Expect = 0.002
Identities = 24/88 (27%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Frame = +2
Query: 11 VKIPXGLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIR----MVNPRLLKVEKWFGSKKE 175
+ +P G+TV +K +V VKGP+G L + F ++ +++ V P ++ + +K
Sbjct: 9 IVLPQGVTVEIKDNVVKVKGPKGELSQEFLPYVKIEVEGNEVWVRPNEEQIIRKSDWRKV 68
Query: 176 LAAVRTVCSHVENMIKGVTKGFQYKMXL 259
T S + NM+ GVT+G++ ++ +
Sbjct: 69 KMFQGTYWSLIRNMVVGVTEGYKKELEI 96
>UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L6P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 178
Score = 42.7 bits (96), Expect = 0.002
Identities = 23/82 (28%), Positives = 44/82 (53%)
Frame = +2
Query: 8 KVKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 187
+++IP + +TV+G G + R + +D+ V+ + +E + K ++ +
Sbjct: 5 ELEIPEDVDAEQDHLDITVEGDNGSVTRRLWYPDIDVS-VDGDTVVIESDEDNAKTMSTI 63
Query: 188 RTVCSHVENMIKGVTKGFQYKM 253
T SH+ENM GVT+G++Y M
Sbjct: 64 GTFQSHIENMFHGVTEGWEYGM 85
>UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1;
Thermoplasma volcanium|Rep: 50S ribosomal protein L6P -
Thermoplasma volcanium
Length = 178
Score = 41.5 bits (93), Expect = 0.005
Identities = 24/93 (25%), Positives = 47/93 (50%)
Frame = +2
Query: 11 VKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 190
++IP + V + ++++ L++ F V + +V +K+ K + +E V
Sbjct: 10 IEIPKDVKVGLSGTMLSMTFGNKKLEKKFADNYVRL-LVEDNKIKIVKSKNNSRERGIVG 68
Query: 191 TVCSHVENMIKGVTKGFQYKMXLCMLTSPLTXS 289
T S + NM+KG+ +GFQY+M + P+ S
Sbjct: 69 TWASEISNMVKGLKEGFQYEMKIDYSHFPMRVS 101
>UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108;
Proteobacteria|Rep: 50S ribosomal protein L6 - Coxiella
burnetii
Length = 178
Score = 41.5 bits (93), Expect = 0.005
Identities = 28/83 (33%), Positives = 42/83 (50%)
Frame = +2
Query: 11 VKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 190
+KIP G+ V+V + +TVKG G L R H AV + + L + S A
Sbjct: 10 IKIPTGVEVNVAGQQITVKGKLGTLTRVI-HRAVKVTKTDAELQTICA-NDSPGSNALAG 67
Query: 191 TVCSHVENMIKGVTKGFQYKMXL 259
T + + NM++GV GFQ K+ +
Sbjct: 68 TARAVLANMVQGVHTGFQRKLVM 90
>UniRef50_P44347 Cluster: 50S ribosomal protein L6; n=18;
Gammaproteobacteria|Rep: 50S ribosomal protein L6 -
Haemophilus influenzae
Length = 177
Score = 41.1 bits (92), Expect = 0.006
Identities = 28/83 (33%), Positives = 43/83 (51%)
Frame = +2
Query: 11 VKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 190
V IP G+ V + +L+TVKG G L R H +V+++ N + + G + A
Sbjct: 9 VNIPAGVEVKLDGQLLTVKGKNGELSRKI-HESVEVKQDNGQFTFTPR-EGFVEANAQSG 66
Query: 191 TVCSHVENMIKGVTKGFQYKMXL 259
T + V M+ GVT+GF K+ L
Sbjct: 67 TARALVNAMVIGVTEGFTKKLVL 89
>UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34;
Bacteria|Rep: 50S ribosomal protein L6 - Bacteroides
thetaiotaomicron
Length = 189
Score = 41.1 bits (92), Expect = 0.006
Identities = 26/87 (29%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Frame = +2
Query: 11 VKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVE---KWFGSKKELA 181
+ IP G+TV +K +VTVKGP+G L + + + A+++ + + + E + + K+
Sbjct: 9 ISIPAGVTVTLKDDVVTVKGPKGELSQ-YVNPAINVAIEDGHVTLTENEKEMIDNPKQKH 67
Query: 182 AVRTVC-SHVENMIKGVTKGFQYKMXL 259
A + S V NM+ GV++G++ ++ L
Sbjct: 68 AFHGLYRSLVHNMVVGVSEGYKKELEL 94
>UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Archaeoglobus fulgidus
Length = 196
Score = 41.1 bits (92), Expect = 0.006
Identities = 23/71 (32%), Positives = 37/71 (52%)
Frame = +2
Query: 68 GPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQY 247
GP+G R K+ V I + + ++ +V KK A V T H+EN+I GV +GF+Y
Sbjct: 48 GPKGENTRYLKYRGVFIEVGDGKV-RVYTTSPKKKHKAMVGTFAGHIENLITGVKEGFEY 106
Query: 248 KMXLCMLTSPL 280
+ + P+
Sbjct: 107 HLKVVYAHFPI 117
Score = 37.9 bits (84), Expect = 0.058
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +1
Query: 259 VYAHFPINXVTTEGNSIIEIRNXLGEKXIRRVKM 360
VYAHFPI V EGN +I I N +GEK RR K+
Sbjct: 111 VYAHFPIK-VRVEGNEVI-IENFIGEKHPRRAKI 142
>UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1;
Streptococcus pneumoniae SP9-BS68|Rep: 50S ribosomal
protein L6 - Streptococcus pneumoniae SP9-BS68
Length = 139
Score = 40.7 bits (91), Expect = 0.008
Identities = 25/86 (29%), Positives = 47/86 (54%)
Frame = +2
Query: 2 NQKVKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELA 181
N+ + +P G+ + +VTVKGP+G L R F ++IR V + + + SK+
Sbjct: 6 NKVIVLPAGVELANNDNVVTVKGPKGELTREFSK-DIEIR-VEGTEITLHRPNDSKEMKT 63
Query: 182 AVRTVCSHVENMIKGVTKGFQYKMXL 259
T + + NM+ GV++GF+ ++ +
Sbjct: 64 IHGTTRALLNNMVVGVSEGFKKELEM 89
>UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain WH7803)
Length = 179
Score = 40.7 bits (91), Expect = 0.008
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +2
Query: 11 VKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 190
+ IP ++V + VTVKGP+G LKR V + V+ ++ K++
Sbjct: 9 IPIPDKVSVSLDGLAVTVKGPKGELKRTLPD-GVTVNQVDNTIVVAPT--SEKRQSRERH 65
Query: 191 TVC-SHVENMIKGVTKGFQYKMXL 259
+C + V NMI+GV+KG+ K+ +
Sbjct: 66 GLCRTLVANMIEGVSKGYSKKLEI 89
>UniRef50_Q2JIL3 Cluster: 50S ribosomal protein L6; n=44; cellular
organisms|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 181
Score = 39.5 bits (88), Expect = 0.019
Identities = 22/84 (26%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +2
Query: 11 VKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 190
+ +P + + + + + VKGP+G L R+ L + ++ N ++L V + + +
Sbjct: 9 IALPAKVEIQIDGQHIAVKGPKGQLSRSLPPL-ITVQQ-NAQMLTVSR-LNDSRPARQLH 65
Query: 191 TVC-SHVENMIKGVTKGFQYKMXL 259
+C + V NM+ GV+KGF+ ++ L
Sbjct: 66 GLCRTLVANMVDGVSKGFERRLEL 89
>UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellular
organisms|Rep: 50S ribosomal protein L6 - Deinococcus
radiodurans
Length = 185
Score = 39.5 bits (88), Expect = 0.019
Identities = 25/85 (29%), Positives = 45/85 (52%)
Frame = +2
Query: 5 QKVKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 184
Q + +P G+TV+ + + VKGP+G L + + + +R +LL VE+ ++K A
Sbjct: 7 QPIAVPSGVTVNAQDGVFKVKGPKGELTVPY-NTELTVRQDGDQLL-VERPSDAQKHRAL 64
Query: 185 VRTVCSHVENMIKGVTKGFQYKMXL 259
+ V N +KGV+ G+ + L
Sbjct: 65 HGLTRTLVANAVKGVSDGYTINLEL 89
>UniRef50_Q9ZCS0 Cluster: 50S ribosomal protein L6; n=10;
Rickettsieae|Rep: 50S ribosomal protein L6 - Rickettsia
prowazekii
Length = 177
Score = 39.1 bits (87), Expect = 0.025
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +2
Query: 11 VKIPXGLTVHVKSRLVTVKGPRGVLKRNFK-HLAVDIRMVNPRLLKVEKWFGSKKELAAV 187
+ IP G+ V + V + GP+G L + FK ++A+ ++ L V+ +K A
Sbjct: 9 ITIPEGVKVGLNDLEVKISGPKGELSKTFKGNIAI---IMEENKLVVKPLAVNKNARAMW 65
Query: 188 RTVCSHVENMIKGVTKGFQYKMXL 259
T S + NMI GV +GF+ K+ +
Sbjct: 66 GTARSIICNMITGVKEGFKLKLEI 89
>UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16;
Firmicutes|Rep: 50S ribosomal protein L6 - Onion yellows
phytoplasma
Length = 184
Score = 39.1 bits (87), Expect = 0.025
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = +2
Query: 2 NQKVKIPXGLTVHVKSR-LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKEL 178
N+ +++P + V +K R ++V+GP+G L+ F H + + N + K + +
Sbjct: 6 NKAIEVPNAVKVDIKDRNFISVEGPKGKLEYQFNHR---LTITNENKVITVKRPNDEIFM 62
Query: 179 AAVR-TVCSHVENMIKGVTKGFQ 244
+ T + + NM++GV+KGFQ
Sbjct: 63 KKIHGTTRALLSNMVEGVSKGFQ 85
>UniRef50_O23049 Cluster: 50S ribosomal protein L6, chloroplast
precursor; n=8; Magnoliophyta|Rep: 50S ribosomal protein
L6, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 223
Score = 39.1 bits (87), Expect = 0.025
Identities = 22/85 (25%), Positives = 44/85 (51%)
Frame = +2
Query: 5 QKVKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 184
Q + +P +T+ ++ + + VKGP G L + V++ L+V+K +++
Sbjct: 49 QPIAVPSNVTIALEGQDLKVKGPLGELALTYPR-EVELTKEESGFLRVKKTVETRRANQM 107
Query: 185 VRTVCSHVENMIKGVTKGFQYKMXL 259
+ +NM+ GV+KGF+ K+ L
Sbjct: 108 HGLFRTLTDNMVVGVSKGFEKKLIL 132
>UniRef50_Q6KI40 Cluster: 50S ribosomal protein l6; n=4;
Mycoplasma|Rep: 50S ribosomal protein l6 - Mycoplasma
mobile
Length = 179
Score = 38.7 bits (86), Expect = 0.033
Identities = 22/82 (26%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +2
Query: 17 IPXGLTVHVKSRLVTVKGPRGVLKRNFKHL-AVDIRMVNPRLLKVEKWFGSKKELAAVRT 193
+P + +++K+ LV +KG GVL N L A+++ + ++ + +K+ +
Sbjct: 11 LPKDVELNIKNNLVEIKGKLGVLTFNVNPLIAIEVENHEVKTIRANEEKHTKQLHGTTNS 70
Query: 194 VCSHVENMIKGVTKGFQYKMXL 259
+ +ENMI GV+KGF+ ++ +
Sbjct: 71 I---IENMIIGVSKGFKKELEI 89
>UniRef50_Q7VQD3 Cluster: 50S ribosomal subunit protein L6; n=2;
Candidatus Blochmannia|Rep: 50S ribosomal subunit
protein L6 - Blochmannia floridanus
Length = 181
Score = 38.3 bits (85), Expect = 0.044
Identities = 24/81 (29%), Positives = 40/81 (49%)
Frame = +2
Query: 17 IPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTV 196
IP + + ++ + V G G L F H + ++ N + L V + + A + T
Sbjct: 13 IPNEIQITIQDCCILVVGVLGNLSYKF-HNFIGVQFSNVKNLIVYSRYRNHVNRALLGTT 71
Query: 197 CSHVENMIKGVTKGFQYKMXL 259
CS + +MI GVT+GF K+ L
Sbjct: 72 CSLINSMIVGVTEGFVKKLQL 92
>UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster
yellows phytoplasma|Rep: 50S ribosomal protein L6 -
Aster yellows phytoplasma
Length = 175
Score = 38.3 bits (85), Expect = 0.044
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +2
Query: 2 NQKVKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV-NPRLLKVEKWFGSKKEL 178
N V IP + V + ++ +KGP G L + + DI ++ N + V++ KK
Sbjct: 14 NIPVLIPNNVFVKKQDNIIYIKGPLGKLNQE---IIGDINIIINHNNIIVKRKHNDKKNR 70
Query: 179 AAVRTVCSHVENMIKGVTKGFQYKMXL 259
A + NMIKGV+ GF+ K+ L
Sbjct: 71 ALHGLYRMLIYNMIKGVSNGFKKKLEL 97
>UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Dehalococcoides
sp. (strain CBDB1)
Length = 182
Score = 38.3 bits (85), Expect = 0.044
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +2
Query: 11 VKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 190
+K+P G+ V + VTVKGP+G L R+F+ V I L+ G+ K +
Sbjct: 9 IKVPPGIKVDINGNDVTVKGPKGTLSRSFRP-EVTINREGDYLVVAP--VGTDKATRSFF 65
Query: 191 TVC-SHVENMIKGVTKGFQYKMXL 259
+ + ++NMI GV GF + +
Sbjct: 66 GLSRTLLDNMIVGVKDGFDKNLEI 89
>UniRef50_Q9ZI38 Cluster: 50S ribosomal protein L6; n=2; Aquifex
pyrophilus|Rep: 50S ribosomal protein L6 - Aquifex
pyrophilus
Length = 187
Score = 38.3 bits (85), Expect = 0.044
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +2
Query: 44 KSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWFGSKKELAAVRTVCSHVENMI 220
K VTV+GP+G L+ N H + + + R +K+++ A T+ + ++NMI
Sbjct: 22 KEHKVTVEGPKGKLELNI-HPDIKVTLNQQERWIKLDRPSDRSFHKAIHGTMAALIKNMI 80
Query: 221 KGVTKGF 241
KGVT+GF
Sbjct: 81 KGVTEGF 87
>UniRef50_Q9A8T8 Cluster: 50S ribosomal protein L6; n=16;
Bacteria|Rep: 50S ribosomal protein L6 - Caulobacter
crescentus (Caulobacter vibrioides)
Length = 177
Score = 37.9 bits (84), Expect = 0.058
Identities = 26/83 (31%), Positives = 40/83 (48%)
Frame = +2
Query: 11 VKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 190
V IP G+ V + + VTVKGP+G L V+++ LL + +K+
Sbjct: 9 VAIPSGVQVTLAGQTVTVKGPKGQLSWTIAD-EVEVKQEGAELLLAPR-VDTKRAKGMWG 66
Query: 191 TVCSHVENMIKGVTKGFQYKMXL 259
+ V NM+ GVT GF+ + L
Sbjct: 67 LSRTLVANMVHGVTVGFEESLEL 89
>UniRef50_Q98PZ7 Cluster: 50S ribosomal protein L6; n=29;
Bacteria|Rep: 50S ribosomal protein L6 - Mycoplasma
pulmonis
Length = 179
Score = 37.1 bits (82), Expect = 0.10
Identities = 25/83 (30%), Positives = 42/83 (50%)
Frame = +2
Query: 11 VKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 190
++IP G V + VKG G L R F V+I+ N + + VE+ K
Sbjct: 9 IQIPSGTEVKIDGSFFEVKGKLGSLSRLFSPF-VNIKHENNQ-ISVERLNELKPTKQLHG 66
Query: 191 TVCSHVENMIKGVTKGFQYKMXL 259
T + + NM+KGV++GF+ ++ +
Sbjct: 67 TTNALIANMVKGVSEGFKKELKI 89
>UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain CC9311)
Length = 179
Score = 36.7 bits (81), Expect = 0.13
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +2
Query: 11 VKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 190
+ IP + V + VTVKGP+G LKR V + V+ ++ +K+
Sbjct: 9 IPIPDKVNVTLSGLAVTVKGPKGELKRTLPS-GVSVNQVDNSIVVAPT--STKRSSRERH 65
Query: 191 TVC-SHVENMIKGVTKGFQYKMXL 259
+C + V NM+ GV++G+ K+ +
Sbjct: 66 GLCRTLVANMVIGVSQGYSKKLEI 89
>UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L6P -
Picrophilus torridus
Length = 180
Score = 36.7 bits (81), Expect = 0.13
Identities = 24/94 (25%), Positives = 44/94 (46%)
Frame = +2
Query: 8 KVKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 187
++K+P + +++ + +KG G R F+ V + +K+ +K V
Sbjct: 9 EIKLPDDVQATMENNELKIKGKLGEASRIFRDNYVKA-YIEGSSVKIATSKNNKYTKGIV 67
Query: 188 RTVCSHVENMIKGVTKGFQYKMXLCMLTSPLTXS 289
T S + +I+GVTKGF+Y M + P+ S
Sbjct: 68 GTWYSETKLLIEGVTKGFEYHMKIDFTHFPMRVS 101
>UniRef50_Q6E783 Cluster: Ribosomal protein L6; n=5; Oomycetes|Rep:
Ribosomal protein L6 - Saprolegnia ferax
Length = 204
Score = 36.3 bits (80), Expect = 0.18
Identities = 20/86 (23%), Positives = 41/86 (47%)
Frame = +2
Query: 2 NQKVKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELA 181
++K++IP + + +K + ++GP G + N H N LL +K+ +
Sbjct: 30 HEKIRIPKNINIVLKKNQLILQGPLGSIDLNIMHSLNYFIKNNNILLSFNSLHLKRKKKS 89
Query: 182 AVRTVCSHVENMIKGVTKGFQYKMXL 259
+ S ++ IKG+ +GF+ + L
Sbjct: 90 FLNLYKSLIKLKIKGILQGFKLNLFL 115
>UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 92
Score = 35.9 bits (79), Expect = 0.24
Identities = 20/58 (34%), Positives = 32/58 (55%)
Frame = +1
Query: 187 EDSLFTCREHD*RSN*RLPIQDAAVYAHFPINXVTTEGNSIIEIRNXLGEKXIRRVKM 360
++ L +C EHD + +VYA FP N + E S+IE + +G+K I RV++
Sbjct: 20 QNHLQSCSEHDQGG---FHYRMRSVYAGFPTNVIIQENGSVIEHWSAMGKKYIHRVQI 74
>UniRef50_Q8DML8 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Synechococcus
elongatus (Thermosynechococcus elongatus)
Length = 187
Score = 35.9 bits (79), Expect = 0.24
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +2
Query: 11 VKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 190
+ +P +T+ + + VTVKGP+G L R F ++ +V V K +
Sbjct: 9 IPLPKNVTLTLDGQQVTVKGPKGQLSRVF---PPEVNVVQEGEAIVVKRRDDSRPAKERH 65
Query: 191 TVC-SHVENMIKGVTKGFQYKMXL 259
+C + + NM++GV++GF K+ +
Sbjct: 66 GLCRTLLANMVEGVSQGFTKKLEI 89
>UniRef50_Q8KAI6 Cluster: 50S ribosomal protein L6; n=15;
Bacteria|Rep: 50S ribosomal protein L6 - Chlorobium
tepidum
Length = 179
Score = 35.9 bits (79), Expect = 0.24
Identities = 24/83 (28%), Positives = 39/83 (46%)
Frame = +2
Query: 11 VKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 190
+++ V VK ++ V GP+G L + I V + V++ SK+ A
Sbjct: 9 IRLADQAQVEVKENMINVTGPKGALSQALVDEV--IVSVADGAVTVQRKDDSKRARAMHG 66
Query: 191 TVCSHVENMIKGVTKGFQYKMXL 259
V NM++GVTKGF K+ +
Sbjct: 67 LYRMLVSNMVEGVTKGFTRKLEM 89
>UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3;
Planctomycetaceae|Rep: 50S ribosomal protein L6 -
Rhodopirellula baltica
Length = 181
Score = 35.5 bits (78), Expect = 0.31
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Frame = +2
Query: 2 NQKVKIPXGLTVHVKSRLVTVKGPRGVLKRNFKH-----LAVDIRMVNPRLLKVEKWFGS 166
N+ V IP G+TV + R + V+GP+G K +FKH +AVD N ++ +
Sbjct: 6 NKPVAIPSGVTVSIADRNIDVEGPKG--KLSFKHRPEVKVAVD-SDTNQVIVSRDGDDRP 62
Query: 167 KKELAAVRTVCSHVENMIKGVTKGFQYKMXL 259
+E + V NM+ GV G++ K+ +
Sbjct: 63 SREFHGLTRAI--VANMLVGVKDGYEKKLEI 91
>UniRef50_O67565 Cluster: 50S ribosomal protein L6; n=1; Aquifex
aeolicus|Rep: 50S ribosomal protein L6 - Aquifex
aeolicus
Length = 183
Score = 35.5 bits (78), Expect = 0.31
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +2
Query: 44 KSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWFGSKKELAAVRTVCSHVENMI 220
K + V+GP+G L+ N H + + + R +K+++ A T+ + V+NMI
Sbjct: 22 KEHKIVVEGPKGKLELNV-HPDIKVTVNQQERWIKLDRPTDRSFHKAIHGTMAALVKNMI 80
Query: 221 KGVTKGF 241
KGVT+GF
Sbjct: 81 KGVTEGF 87
>UniRef50_Q1XDI8 Cluster: Chloroplast 50S ribosomal protein L6; n=4;
cellular organisms|Rep: Chloroplast 50S ribosomal
protein L6 - Porphyra yezoensis
Length = 180
Score = 35.5 bits (78), Expect = 0.31
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +2
Query: 11 VKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 190
+ +P L+ + +TV GP+G L R +++ ++N + K G K + +
Sbjct: 9 ILLPTNLSTQFDGQTITVTGPKGTLSRTLP-AGINLEILNDTI--AVKTSGQTKMASQLH 65
Query: 191 TVC-SHVENMIKGVTKGFQYKMXL 259
+ + + NMI+GV+ GF K+ +
Sbjct: 66 GLSRTLISNMIEGVSNGFFKKLQI 89
>UniRef50_A5K452 Cluster: Pv-fam-d protein; n=1; Plasmodium
vivax|Rep: Pv-fam-d protein - Plasmodium vivax
Length = 853
Score = 34.7 bits (76), Expect = 0.54
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Frame = +2
Query: 38 HVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLL---KVEKWFGSKKELAAVRTVCSHV 208
H + L KGP + F+ + D R + L + EK SKKELA RT
Sbjct: 688 HPQQHLDMRKGPGNFQQEAFRGMTPDNRQKSGEALMREEYEKAKESKKELAKERTALG-- 745
Query: 209 ENMIKGVTKGFQYKMXLCMLTSPLTXSPLR 298
N++K + F+Y+M M SP++
Sbjct: 746 -NLLKYIDTSFEYEMMRSMKAKNKETSPVK 774
>UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 946
Score = 34.3 bits (75), Expect = 0.72
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -3
Query: 222 LIMFSTCEQTVLTAASSFLDPNHFSTFRRRGFTMRMSTA--KCLKFLLRTPRGPLTVTRR 49
L +F+ C ++V+ A+S L P+H + R GF + TA + FL R PL + R
Sbjct: 22 LELFAACRESVVHVAASHLLPDHVAVTTRNGFVELIDTATGEFRLFLTYLDRIPLDASLR 81
Query: 48 DFT 40
F+
Sbjct: 82 CFS 84
>UniRef50_Q1ZBZ7 Cluster: 50S ribosomal protein L6; n=1;
Psychromonas sp. CNPT3|Rep: 50S ribosomal protein L6 -
Psychromonas sp. CNPT3
Length = 128
Score = 33.9 bits (74), Expect = 0.95
Identities = 24/83 (28%), Positives = 42/83 (50%)
Frame = +2
Query: 11 VKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 190
+ + G+ V V + +T+KG +G L R AV +++ + ++ G K A
Sbjct: 9 ITVLAGVEVKVNGQEITLKGGKGELVRTLND-AVVVKLEDG-VITFAPVEGIKDAWAQAG 66
Query: 191 TVCSHVENMIKGVTKGFQYKMXL 259
T ++V NM+ GVT GF+ + L
Sbjct: 67 TARANVNNMMIGVTTGFKKTLLL 89
>UniRef50_A0YJS9 Cluster: 50S ribosomal protein L6; n=2; cellular
organisms|Rep: 50S ribosomal protein L6 - Lyngbya sp.
PCC 8106
Length = 181
Score = 33.9 bits (74), Expect = 0.95
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +2
Query: 11 VKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV- 187
+ IP +T ++ + + VKGP+G L R + + + L+K ++L +
Sbjct: 9 IPIPPKVTFTIEGQHIIVKGPKGELSRVLPEKVILEQDGDTLLVKRRDESRVARQLHGLS 68
Query: 188 RTVCSHVENMIKGVTKGFQYKMXL 259
RT+ V NM+ GV+KGF+ ++ +
Sbjct: 69 RTL---VANMVDGVSKGFEKRLEI 89
>UniRef50_Q7NEG7 Cluster: 50S ribosomal protein L6; n=19;
Bacteria|Rep: 50S ribosomal protein L6 - Gloeobacter
violaceus
Length = 191
Score = 33.9 bits (74), Expect = 0.95
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +2
Query: 11 VKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG--SKKELAA 184
+ IP + V + R V VKGP+G L +V++ + RLL + ++++
Sbjct: 9 IAIPPKVEVTLDGRRVVVKGPKGTLDLTLPD-SVEVVREDGRLLVTRRGESRRAREQHGL 67
Query: 185 VRTVCSHVENMIKGVTKGFQYKMXL 259
RT+ V NM+ GVT GF M +
Sbjct: 68 GRTL---VANMVTGVTTGFTKPMQI 89
>UniRef50_A6DRC5 Cluster: 50S ribosomal protein L6; n=1;
Lentisphaera araneosa HTCC2155|Rep: 50S ribosomal
protein L6 - Lentisphaera araneosa HTCC2155
Length = 181
Score = 33.1 bits (72), Expect = 1.7
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Frame = +2
Query: 2 NQKVKIPXGLTVHVKSRLVTVKGPRGVLKRNFK---HLAVDIRMVNPRLLKVEKWFGSKK 172
N+ + I G+ V + + V+VKGP+G LK +VD + + + SK
Sbjct: 6 NKAISITAGVEVKISGKEVSVKGPKGELKHTLTPRVEASVDADSNEVVVTRQDDSRFSKA 65
Query: 173 ELAAVRTVCSHVENMIKGVTKGFQYKMXL 259
E R++ + NMI GV+ G++ ++ +
Sbjct: 66 EHGLNRSL---ISNMIVGVSTGWKKELEI 91
>UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Mesorhizobium sp. (strain BNC1)
Length = 177
Score = 33.1 bits (72), Expect = 1.7
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 11 VKIPXGLTVHVKSRLVTVKGPRGVLK 88
V +P G+T +V ++VT KGP+G LK
Sbjct: 9 VPVPQGVTANVDGQVVTAKGPKGELK 34
>UniRef50_O21255 Cluster: Mitochondrial 60S ribosomal protein L6;
n=1; Reclinomonas americana|Rep: Mitochondrial 60S
ribosomal protein L6 - Reclinomonas americana
Length = 185
Score = 32.7 bits (71), Expect = 2.2
Identities = 22/92 (23%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Frame = +2
Query: 2 NQKVKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV-NPRLLKVEKW-FGSKKE 175
++++KIP +++ + + V+G G L+ ++ + ++ + N + L ++ G+KK+
Sbjct: 6 SKQIKIPKNVSIDLSMNKIYVRGDLGKLELPLNNINIHLKNIENDQFLILDPINTGTKKQ 65
Query: 176 LAAV----RTVCSHVENMIKGVTKGFQYKMXL 259
A T + +ENM+ GV+KG+ + L
Sbjct: 66 KTASYIMWGTYRTLIENMLIGVSKGYSKTIEL 97
>UniRef50_Q6Q8X3 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
uncultured marine gamma proteobacterium EBAC20E09
Length = 182
Score = 32.3 bits (70), Expect = 2.9
Identities = 20/84 (23%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +2
Query: 11 VKIPXGLTVHVKSRLVTVKGPRGVLKRNFKH-LAVDIRMVNPRLLKVEKWFGSKKELAAV 187
+ IP + + + +V VKG +G L +++D+ +++ ++ +++ +A
Sbjct: 9 ITIPENVDLSINENVVIVKGSKGELDFVLPDTISLDVA---DKVITIKYDEENQQSVALA 65
Query: 188 RTVCSHVENMIKGVTKGFQYKMXL 259
T S + NM+ GV++GF+ K+ L
Sbjct: 66 GTSRSLINNMVIGVSEGFEKKLEL 89
>UniRef50_P47412 Cluster: 50S ribosomal protein L6; n=6;
Mycoplasmataceae|Rep: 50S ribosomal protein L6 -
Mycoplasma genitalium
Length = 184
Score = 32.3 bits (70), Expect = 2.9
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Frame = +2
Query: 2 NQKVKI-PXGLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIRMVNPRLLKVEKWFGSKKE 175
N+ +KI P +++ + L+T+KGP G K+L + + N + KV K+
Sbjct: 6 NRSIKIDPSKVSLMQTTTLLTIKGPLGENTIKLPKNLPLKFVVENDTI-KVTNNNNLKQT 64
Query: 176 LAAVRTVCSHVENMIKGVTKGFQYKMXL 259
T + V N + GVTKGF+ K+ L
Sbjct: 65 KILHGTFNALVNNAVIGVTKGFEKKLIL 92
>UniRef50_Q74L75 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Lactobacillus
johnsonii
Length = 176
Score = 32.3 bits (70), Expect = 2.9
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +2
Query: 11 VKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV-NPRLLKVEKWFGSKKELAAV 187
+++P +TV +TVKGP+G L R F D R+ + ++ S+ + A
Sbjct: 9 IEVPEKVTVTKNGDDITVKGPKGELTRYF-----DPRITFEQKDGEIHFSRSSEADKALH 63
Query: 188 RTVCSHVENMIKGVTKGFQYKMXL 259
T +++ +MI+GVT G+ K+ L
Sbjct: 64 GTERANLASMIEGVTDGYVKKLTL 87
>UniRef50_A5WFU5 Cluster: Pyruvate oxidase; n=1; Psychrobacter sp.
PRwf-1|Rep: Pyruvate oxidase - Psychrobacter sp. PRwf-1
Length = 603
Score = 31.5 bits (68), Expect = 5.1
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2
Query: 26 GLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKW 157
G TVH L +V + R+ K + VDI++ N RLL VE++
Sbjct: 519 GFTVHKAEELESVLQQAQQVTRSGKPVLVDIKITNERLLPVEQF 562
>UniRef50_Q5CV19 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 1429
Score = 31.1 bits (67), Expect = 6.7
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +2
Query: 134 RLLKVEKWFGSKKELAAVRTVCSHV-ENMIKGVTKGFQYKMXLCMLTSPLT--XSPLRVI 304
++ ++ +F + L ++ C V + +I G+T+G YK + + S +T SP + I
Sbjct: 374 KITGLQGFFMGNRGLVGIKVECDRVWQEVILGITEGTDYKALVGSMISAVTLHLSPEKFI 433
Query: 305 QLLRYVTXWVRNXSEGXRW 361
Q L + R G W
Sbjct: 434 QSLVVFSTTGRQQKLGDDW 452
>UniRef50_A5K579 Cluster: Putative uncharacterized protein; n=3;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 2784
Score = 31.1 bits (67), Expect = 6.7
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 53 LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTV 196
L+ K VLK+ + L ++I N + K+E W K+L+A V
Sbjct: 752 LIDTKTQNDVLKKEVERLKMEIEKKNHEIKKIENWNDLTKKLSAENVV 799
>UniRef50_A2F8M2 Cluster: Adaptin N terminal region family protein;
n=3; Trichomonas vaginalis G3|Rep: Adaptin N terminal
region family protein - Trichomonas vaginalis G3
Length = 764
Score = 31.1 bits (67), Expect = 6.7
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = -2
Query: 259 QXHLVLEAFSYSFNHVLYM*TDCPHGGKLLFGSEPFLNLQETRVYHANVNSQVFE-VPFE 83
Q L+++ F ++ VLY+ GKL +G++ N+ + ++ +N++ FE V FE
Sbjct: 619 QEELLIKRFFFTNEGVLYLDNFIHVSGKLKYGTDKMSNVAQIQLTLSNMSLFPFEQVKFE 678
Query: 82 NSAGP 68
S P
Sbjct: 679 ISKNP 683
>UniRef50_P41843 Cluster: Uncharacterized protein T20B12.3; n=2;
Caenorhabditis|Rep: Uncharacterized protein T20B12.3 -
Caenorhabditis elegans
Length = 504
Score = 31.1 bits (67), Expect = 6.7
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -3
Query: 234 LVTPLIMFSTCEQTVLTAASSFLDPNHFSTFRRRGFTMRMSTAKCL 97
L P +++ + ++++LT SFL H T+ F R+S +CL
Sbjct: 275 LTNPSLLYMSQKESILTLLDSFLSSTHLPTYITASFLKRLS--RCL 318
>UniRef50_Q63XR8 Cluster: Error-prone DNA polymerase; n=22;
Burkholderiales|Rep: Error-prone DNA polymerase -
Burkholderia pseudomallei (Pseudomonas pseudomallei)
Length = 1072
Score = 31.1 bits (67), Expect = 6.7
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +2
Query: 56 VTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 184
V+ PRG L+ K L VD +V R+ K +WF ++L A
Sbjct: 433 VSTYRPRGALRETGKALGVDPMLVE-RVAKEHRWFDGSRDLLA 474
>UniRef50_UPI000049A156 Cluster: ankyrin; n=9; Entamoeba histolytica
HM-1:IMSS|Rep: ankyrin - Entamoeba histolytica HM-1:IMSS
Length = 866
Score = 30.7 bits (66), Expect = 8.9
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2
Query: 92 NFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIK 223
+F LAVD ++N +L+K + ++K + T+ HV +K
Sbjct: 683 DFPELAVDDEILNKKLIKYNNEWNAQKRMEIFSTIVGHVGEHVK 726
>UniRef50_A4XRB4 Cluster: Transcriptional regulator, LysR family;
n=6; Pseudomonas aeruginosa group|Rep: Transcriptional
regulator, LysR family - Pseudomonas mendocina ymp
Length = 318
Score = 30.7 bits (66), Expect = 8.9
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +2
Query: 116 IRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMXLCMLTSPLTXSPL 295
+R+ +P L +W ++L A+ C V N+ + + K Q M C+L S + PL
Sbjct: 191 LRLTDP--LYRGQWDFGDEQLDALPAECFQV-NVAEALVKAAQAGMGFCLLPSFVASQPL 247
Query: 296 RVIQLLR 316
R +LLR
Sbjct: 248 REGRLLR 254
>UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10;
Firmicutes|Rep: 50S ribosomal protein L6 - Lactobacillus
acidophilus
Length = 176
Score = 30.7 bits (66), Expect = 8.9
Identities = 22/83 (26%), Positives = 42/83 (50%)
Frame = +2
Query: 11 VKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 190
+++P +TV + +TVKGP+G L R F + N + + S+ + A
Sbjct: 9 IEVPDSVTVTKEGDNITVKGPKGELTRYFDPKITFEQ--NDGEINFSR--SSESDKALHG 64
Query: 191 TVCSHVENMIKGVTKGFQYKMXL 259
T +++ +MI+GV G++ + L
Sbjct: 65 TERANLASMIEGVLNGYKKTLKL 87
>UniRef50_Q2IJ73 Cluster: 50S ribosomal protein L6; n=6;
Bacteria|Rep: 50S ribosomal protein L6 -
Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 180
Score = 30.7 bits (66), Expect = 8.9
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +2
Query: 11 VKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHL-AVDIRMVNPRLLKVEKWFGSKKELAAV 187
VKIP + V V +V V+GP+G + L +V + ++ + ++ +K
Sbjct: 9 VKIPEKVKVSVDGNVVKVEGPKGKMHFPTNPLVSVQVDKGEVKVARQDESHVAKGLHGLT 68
Query: 188 RTVCSHVENMIKGVTKGFQ 244
RT+ V+N ++GV KG++
Sbjct: 69 RTL---VKNALEGVVKGYE 84
>UniRef50_Q6BTT3 Cluster: GPI-anchored wall transfer protein 1; n=4;
Saccharomycetales|Rep: GPI-anchored wall transfer
protein 1 - Debaryomyces hansenii (Yeast) (Torulaspora
hansenii)
Length = 493
Score = 30.7 bits (66), Expect = 8.9
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +2
Query: 41 VKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKEL 178
VK +T ++ NF LAVD RM R KVE W S +L
Sbjct: 119 VKKPFITAYRSHMLVITNFAILAVDFRMFPRRFAKVETWGTSLMDL 164
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 348,450,376
Number of Sequences: 1657284
Number of extensions: 6315013
Number of successful extensions: 14195
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 13888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14150
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 13647406432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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