Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20246
(368 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT022718-1|AAY55134.1| 190|Drosophila melanogaster RE74350p pro... 129 1e-30
AE014134-2010|AAF53049.1| 190|Drosophila melanogaster CG6141-PB... 129 1e-30
AE014134-2009|AAF53048.2| 190|Drosophila melanogaster CG6141-PA... 129 1e-30
X94613-1|CAA64319.1| 190|Drosophila melanogaster ribosomal prot... 128 2e-30
AY060683-1|AAL28231.1| 284|Drosophila melanogaster GH12395p pro... 29 1.4
AE014297-2850|AAN14364.1| 284|Drosophila melanogaster CG31200-P... 29 1.4
BT023113-1|AAY55529.1| 423|Drosophila melanogaster IP03677p pro... 28 3.3
BT004835-1|AAO45191.1| 241|Drosophila melanogaster RH48327p pro... 28 4.4
>BT022718-1|AAY55134.1| 190|Drosophila melanogaster RE74350p
protein.
Length = 190
Score = 129 bits (311), Expect = 1e-30
Identities = 60/84 (71%), Positives = 70/84 (83%)
Frame = +2
Query: 2 NQKVKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELA 181
NQ VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKVEKWFG+KKELA
Sbjct: 7 NQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFGTKKELA 66
Query: 182 AVRTVCSHVENMIKGVTKGFQYKM 253
AVRTVCSH+ENMIKGVT GFQYKM
Sbjct: 67 AVRTVCSHIENMIKGVTFGFQYKM 90
Score = 64.9 bits (151), Expect = 3e-11
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +1
Query: 256 AVYAHFPINXVTTEGNSIIEIRNXLGEKXIRRVKMAP 366
AVYAHFPIN VT+E N++IEIRN LGEK IRRV+MAP
Sbjct: 92 AVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAP 128
>AE014134-2010|AAF53049.1| 190|Drosophila melanogaster CG6141-PB,
isoform B protein.
Length = 190
Score = 129 bits (311), Expect = 1e-30
Identities = 60/84 (71%), Positives = 70/84 (83%)
Frame = +2
Query: 2 NQKVKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELA 181
NQ VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKVEKWFG+KKELA
Sbjct: 7 NQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFGTKKELA 66
Query: 182 AVRTVCSHVENMIKGVTKGFQYKM 253
AVRTVCSH+ENMIKGVT GFQYKM
Sbjct: 67 AVRTVCSHIENMIKGVTFGFQYKM 90
Score = 64.9 bits (151), Expect = 3e-11
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +1
Query: 256 AVYAHFPINXVTTEGNSIIEIRNXLGEKXIRRVKMAP 366
AVYAHFPIN VT+E N++IEIRN LGEK IRRV+MAP
Sbjct: 92 AVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAP 128
>AE014134-2009|AAF53048.2| 190|Drosophila melanogaster CG6141-PA,
isoform A protein.
Length = 190
Score = 129 bits (311), Expect = 1e-30
Identities = 60/84 (71%), Positives = 70/84 (83%)
Frame = +2
Query: 2 NQKVKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELA 181
NQ VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKVEKWFG+KKELA
Sbjct: 7 NQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFGTKKELA 66
Query: 182 AVRTVCSHVENMIKGVTKGFQYKM 253
AVRTVCSH+ENMIKGVT GFQYKM
Sbjct: 67 AVRTVCSHIENMIKGVTFGFQYKM 90
Score = 64.9 bits (151), Expect = 3e-11
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +1
Query: 256 AVYAHFPINXVTTEGNSIIEIRNXLGEKXIRRVKMAP 366
AVYAHFPIN VT+E N++IEIRN LGEK IRRV+MAP
Sbjct: 92 AVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAP 128
>X94613-1|CAA64319.1| 190|Drosophila melanogaster ribosomal protein
L9 protein.
Length = 190
Score = 128 bits (310), Expect = 2e-30
Identities = 60/84 (71%), Positives = 69/84 (82%)
Frame = +2
Query: 2 NQKVKIPXGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELA 181
NQ VKIP + VK+R+VT+ G RG LKR FKHLA+D+ M + R LKVEKWFG+KKELA
Sbjct: 7 NQCVKIPKDIKASVKARVVTITGTRGTLKRTFKHLALDMYMPDKRTLKVEKWFGTKKELA 66
Query: 182 AVRTVCSHVENMIKGVTKGFQYKM 253
AVRTVCSH+ENMIKGVT GFQYKM
Sbjct: 67 AVRTVCSHIENMIKGVTFGFQYKM 90
Score = 64.9 bits (151), Expect = 3e-11
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +1
Query: 256 AVYAHFPINXVTTEGNSIIEIRNXLGEKXIRRVKMAP 366
AVYAHFPIN VT+E N++IEIRN LGEK IRRV+MAP
Sbjct: 92 AVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAP 128
>AY060683-1|AAL28231.1| 284|Drosophila melanogaster GH12395p
protein.
Length = 284
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -3
Query: 243 WKPLVTPLIMFSTCEQTVLTAAS-SFLDPNHFSTFRRRGFTMRMSTAKC 100
W V P+ + T E LT + + NH ++ + +G M +ST KC
Sbjct: 157 WTNWVQPICLEGTSEPETLTNRNLHYTGFNHMASEKGKGLAMTVSTQKC 205
>AE014297-2850|AAN14364.1| 284|Drosophila melanogaster CG31200-PA
protein.
Length = 284
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -3
Query: 243 WKPLVTPLIMFSTCEQTVLTAAS-SFLDPNHFSTFRRRGFTMRMSTAKC 100
W V P+ + T E LT + + NH ++ + +G M +ST KC
Sbjct: 157 WTNWVQPICLEGTSEPETLTNRNLHYTGFNHMASEKGKGLAMTVSTQKC 205
>BT023113-1|AAY55529.1| 423|Drosophila melanogaster IP03677p
protein.
Length = 423
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -1
Query: 200 NRLSSRRQAPFWIRTISQPSGDE-GLPCECQ 111
+R RR+ W RT+ QP G G CECQ
Sbjct: 390 SRCQRRRRWCCWWRTLRQPGGRRPGRLCECQ 420
>BT004835-1|AAO45191.1| 241|Drosophila melanogaster RH48327p
protein.
Length = 241
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +2
Query: 32 TVHVKSRLVTVKGPRGVLKRNFKHLAVDI 118
TVH+K R +T K R K NFK L + I
Sbjct: 4 TVHLKDRTITEKLVRRAEKANFKALVLTI 32
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,691,228
Number of Sequences: 53049
Number of extensions: 297239
Number of successful extensions: 620
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 964005624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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