Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20245
         (320 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   3.2  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   4.2  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    20   5.5  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    20   5.5  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    20   7.3  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    20   7.3  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    20   7.3  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    20   7.3  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    19   9.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    19   9.7  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    19   9.7  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 3.2
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 89  NLHNPDSNDRSGSP 48
           N  +P S+DRSG+P
Sbjct: 933 NSASPASSDRSGTP 946


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 10/33 (30%), Positives = 14/33 (42%)
 Frame = +2

Query: 131 SNMQCTGFPGPGSRHFATFNPMKEFVRPVHDSA 229
           S+MQ    P P + H A  +P        HD +
Sbjct: 112 SHMQFMQLPHPAAAHSALLSPAMPHNLTRHDGS 144


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 181 HLQPDEGVRAAR 216
           HL PD+ +R A+
Sbjct: 10  HLHPDDAIRRAK 21


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 181 HLQPDEGVRAAR 216
           HL PD+ +R A+
Sbjct: 10  HLHPDDAIRRAK 21


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 19.8 bits (39), Expect = 7.3
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = -1

Query: 308 SASSRAPGRSRTASGV*LETLELVVDMRCR 219
           ++ S  P  S TAS      ++   D  CR
Sbjct: 23  ASGSMVPSFSSTASSALAAAVDAATDKSCR 52


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 19.8 bits (39), Expect = 7.3
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = -1

Query: 308 SASSRAPGRSRTASGV*LETLELVVDMRCR 219
           ++ S  P  S TAS      ++   D  CR
Sbjct: 82  ASGSMVPSFSSTASSALAAAVDAATDKSCR 111


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 19.8 bits (39), Expect = 7.3
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = -1

Query: 308 SASSRAPGRSRTASGV*LETLELVVDMRCR 219
           ++ S  P  S TAS      ++   D  CR
Sbjct: 23  ASGSMVPSFSSTASSALAAAVDAATDKSCR 52


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 19.8 bits (39), Expect = 7.3
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = -1

Query: 308 SASSRAPGRSRTASGV*LETLELVVDMRCR 219
           ++ S  P  S TAS      ++   D  CR
Sbjct: 82  ASGSMVPSFSSTASSALAAAVDAATDKSCR 111


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 19.4 bits (38), Expect = 9.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 260 KHQRQYASDLEHE 298
           KHQ+Q + D E+E
Sbjct: 22  KHQKQESRDEEYE 34


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 19.4 bits (38), Expect = 9.7
 Identities = 10/37 (27%), Positives = 15/37 (40%)
 Frame = -1

Query: 149 QCTACYCQL*RRQDRSHQYCNLHNPDSNDRSGSPGAN 39
           QC    C + R   R  + CN +  + +    S G N
Sbjct: 487 QCNQNKCPVKRGNGRCDEECNTYACEFDGNDCSLGIN 523


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 19.4 bits (38), Expect = 9.7
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = -1

Query: 89  NLHNPDSNDRSGSP 48
           NL NP +  + G P
Sbjct: 680 NLQNPSTGSKPGKP 693


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,793
Number of Sequences: 336
Number of extensions: 1215
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6048897
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)