Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20245
         (320 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   2.8  
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    23   2.8  
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    23   3.7  
AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin rece...    23   3.7  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        22   4.9  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    22   6.5  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    21   8.6  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    21   8.6  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
            transcription factor FRU-MA protein.
          Length = 960

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
 Frame = -1

Query: 185  RWRSVASRAPGT-QCTACYCQL*RRQDRSHQYCNLHNPDSNDR 60
            RW       P + +C  C  +  RR D    +C + +P+  DR
Sbjct: 911  RWHHANIHRPQSHECPVCGQKFTRR-DNMKAHCKVKHPELRDR 952


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 253 KRSNSSWTCAVVDGPHELLH 194
           K  N+   CAV  GPH + H
Sbjct: 398 KDCNAEVKCAVCSGPHRVGH 417


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 95  YCNLHNPDSNDRSGSPGAN*NLSSHIGP 12
           Y N    +S+   G  G N  +SSH+GP
Sbjct: 183 YSNTGFNNSHMGGGGGGPNSPISSHMGP 210


>AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin
           receptor protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 223 VVDGPHELLHRVEGGEVSRA 164
           V DGPH L    +G  +S A
Sbjct: 13  VTDGPHSLAGDEDGANISTA 32


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = +2

Query: 104 IDPDVFK-VDSNMQCT-GFPGPGSRH 175
           I+P+ ++ + S +  T G P PGSRH
Sbjct: 15  IEPNRYRRIVSGLDSTRGSPAPGSRH 40


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = -2

Query: 301 LLVLQVARVLPLVFDLKRSNSSWTCAVVDGPHELLHR 191
           L VL +A+++ +++ L+    SWT    + PHE++ R
Sbjct: 563 LAVLNIAKLVIILY-LR----SWTVLTCNVPHEVVFR 594


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 122 KVDSNMQCTGFPGPGSR 172
           ++D N+Q    PGPG +
Sbjct: 219 RLDGNVQVREAPGPGEK 235


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 253 KRSNSSWTCAVVDGPHELLH 194
           K   S   CA  +GPH + H
Sbjct: 424 KSCTSEIKCAACNGPHRIGH 443


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 312,767
Number of Sequences: 2352
Number of extensions: 5051
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 21613350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)