Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20244
(357 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0358 + 2573241-2573324,2573509-2573636,2573769-2573971,257... 44 4e-05
01_07_0387 - 43224718-43224810,43224990-43225070,43225676-432257... 42 1e-04
12_02_1181 - 26732439-26732528,26732883-26732963,26733104-267331... 42 2e-04
03_05_1124 + 30559633-30559674,30559781-30559890,30559973-305600... 42 2e-04
06_03_0487 - 21352955-21353080,21353164-21353357,21353815-213539... 41 2e-04
01_06_1119 - 34640611-34640721,34640995-34641075,34641437-346414... 41 2e-04
06_03_0491 - 21383036-21383161,21383246-21383439,21383627-213837... 40 4e-04
04_01_0339 - 4429742-4429840,4429932-4430012,4430232-4430291,443... 40 6e-04
06_03_0488 - 21361131-21361226,21361922-21362124,21362252-213624... 36 0.007
02_02_0105 + 6810839-6810913,6811005-6811132,6811562-6811764,681... 36 0.007
06_03_0486 - 21344680-21344805,21344922-21345115,21350027-213501... 35 0.016
06_01_0359 + 2578179-2578291,2578950-2579152,2579319-2579444,257... 35 0.022
03_05_0901 + 28635672-28636094,28637623-28637802,28637903-286381... 29 1.4
03_02_0162 + 6053144-6053365,6053474-6053548,6054477-6054623,605... 29 1.4
01_05_0706 + 24457148-24458031,24458621-24458822,24458896-244590... 28 1.9
01_01_0933 - 7368672-7368785,7368860-7368895,7369581-7369715,736... 27 3.3
01_05_0791 + 25267885-25267930,25268258-25268713,25268802-252688... 27 4.3
04_04_0753 - 27797298-27797547,27797765-27797951,27798040-277981... 26 7.6
02_05_0431 + 28933418-28933951,28934066-28934213,28934729-28935030 26 7.6
>06_01_0358 +
2573241-2573324,2573509-2573636,2573769-2573971,
2574129-2574254,2574522-2574680,2574857-2575050,
2575251-2575376
Length = 339
Score = 44.0 bits (99), Expect = 4e-05
Identities = 28/81 (34%), Positives = 39/81 (48%)
Frame = +1
Query: 10 EPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXTPAMAPWESSEHF 189
EPTSGN GIGVA + G V P + S +K ++ LGAEV+ T ++
Sbjct: 91 EPTSGNLGIGVAYNALLKGYRFVAVMPAEYSLDKQMLLTYLGAEVILTDPTLGFQGQLDK 150
Query: 190 LSVAKRRLLEDPNAISCDQYK 252
+ K + PN DQ+K
Sbjct: 151 VEQIKNDM---PNVHHLDQFK 168
Score = 32.3 bits (70), Expect = 0.12
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 261 NPRTHYEYTAEEILA-LXPDVDMIVMGSGTGGT 356
NP H+ +T EI VD+ V GSGTGGT
Sbjct: 172 NPEAHFVWTGPEIWKDTAGKVDIFVAGSGTGGT 204
>01_07_0387 -
43224718-43224810,43224990-43225070,43225676-43225735,
43227129-43227208,43227285-43227336,43227412-43227549,
43227627-43227944,43229381-43229438,43229520-43229629,
43230041-43230280
Length = 409
Score = 41.9 bits (94), Expect = 1e-04
Identities = 22/50 (44%), Positives = 27/50 (54%)
Frame = +1
Query: 10 EPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXTPA 159
EPTSGNTGIG+A A G + P S E+ + GAE+V T A
Sbjct: 159 EPTSGNTGIGLAFIAASRGYKLILTMPASMSMERRVLLKAFGAELVLTDA 208
Score = 33.5 bits (73), Expect = 0.050
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 234 ILRSVQEDVNPRTHYEYTAEEILA-LXPDVDMIVMGSGTGGT 356
+L+ NP+ HYE T EI VD+ + G GTGGT
Sbjct: 231 MLQQFDNPANPKVHYETTGPEIWEDSKGKVDVFIGGIGTGGT 272
>12_02_1181 -
26732439-26732528,26732883-26732963,26733104-26733163,
26733372-26733451,26733815-26733866,26733987-26734124,
26734203-26734466,26735895-26735952,26736153-26736262,
26736385-26736432,26736812-26736823
Length = 330
Score = 41.5 bits (93), Expect = 2e-04
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +1
Query: 10 EPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXT 153
EPTSGNTGIG+A A G + P S E+ + GAE++ T
Sbjct: 81 EPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILT 128
Score = 36.3 bits (80), Expect = 0.007
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 234 ILRSVQEDVNPRTHYEYTAEEI-LALXPDVDMIVMGSGTGGT 356
IL+ + NP+ HYE T EI VD +V G GTGGT
Sbjct: 153 ILQQFENPANPKIHYETTGPEIWKGTGGKVDGLVSGIGTGGT 194
>03_05_1124 +
30559633-30559674,30559781-30559890,30559973-30560030,
30560455-30560718,30560803-30560940,30561264-30561315,
30561525-30561604,30561929-30561988,30562084-30562164,
30562299-30562376,30563548-30563676,30563896-30564039,
30564145-30564290,30564402-30564558,30564657-30564715,
30564800-30564959,30565054-30565203,30565309-30565445,
30565531-30565677,30565995-30566052,30566417-30566518,
30566590-30566627,30566846-30566972,30567053-30567223,
30567313-30567444,30567575-30567681,30567815-30567875,
30567970-30568147,30568245-30568450,30568781-30568879,
30569021-30569236,30569333-30569472,30569559-30569660,
30569747-30569861,30570129-30570194,30570323-30570480,
30570594-30570690,30570931-30571137,30571435-30571505,
30571648-30571747,30571836-30571892,30571969-30572025,
30572108-30572188,30572319-30572401,30572504-30572651
Length = 1722
Score = 41.5 bits (93), Expect = 2e-04
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = +1
Query: 10 EPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXT 153
EPTSGNTGIG+A A G + P S E+ + GAE+V T
Sbjct: 75 EPTSGNTGIGLAFMAAAKGYKLILTMPASMSMERRIILKAFGAELVLT 122
Score = 39.5 bits (88), Expect = 8e-04
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 234 ILRSVQEDVNPRTHYEYTAEEI-LALXPDVDMIVMGSGTGGT 356
IL+ + NP+ HYE T EI A VD++V G GTGGT
Sbjct: 147 ILQQFENPANPKIHYETTGPEIWKATAGKVDILVSGIGTGGT 188
>06_03_0487 -
21352955-21353080,21353164-21353357,21353815-21353973,
21354117-21354242,21354502-21354704,21354892-21355019,
21355323-21355565,21356734-21356928
Length = 457
Score = 41.1 bits (92), Expect = 2e-04
Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 10 EPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXT-PAM 162
EPTSGN GIG+ L G V P K S +K + LGAE++ T PA+
Sbjct: 209 EPTSGNLGIGLVLVAVQKGYRFIAVMPAKYSLDKQMLLRFLGAELILTDPAI 260
>01_06_1119 -
34640611-34640721,34640995-34641075,34641437-34641496,
34641596-34641645,34641758-34641809,34642462-34642599,
34642716-34642979,34643057-34643114,34643178-34643287,
34643650-34643925
Length = 399
Score = 41.1 bits (92), Expect = 2e-04
Identities = 26/80 (32%), Positives = 37/80 (46%)
Frame = +1
Query: 10 EPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXTPAMAPWESSEHF 189
EPT+GNTGIG+A A G P E+ + GAE+V T P + +
Sbjct: 153 EPTTGNTGIGLASVAAARGYKLIATVPSSIDVERCVLLRAFGAEIVLTD---PNKGLKGA 209
Query: 190 LSVAKRRLLEDPNAISCDQY 249
L A+ + + PNA Q+
Sbjct: 210 LDKAEEIVSKTPNAYMFQQF 229
>06_03_0491 -
21383036-21383161,21383246-21383439,21383627-21383785,
21383904-21384029,21384290-21384492,21384691-21384818,
21385691-21385783
Length = 342
Score = 40.3 bits (90), Expect = 4e-04
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +1
Query: 10 EPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXT 153
EPTSGN GIG+ L G V P + S +K + LGAE++ T
Sbjct: 94 EPTSGNLGIGLVLVAIQKGYRFIAVMPARYSPDKQMLLRFLGAELILT 141
Score = 29.5 bits (63), Expect = 0.81
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 261 NPRTHYEYTAEEILA-LXPDVDMIVMGSGTGGT 356
NP H+++T EI VD V +GTGGT
Sbjct: 175 NPEAHFKWTGPEIWKDTAGKVDFFVTAAGTGGT 207
>04_01_0339 -
4429742-4429840,4429932-4430012,4430232-4430291,
4430715-4430794,4430923-4430974,4431045-4431182,
4431449-4431712,4432031-4432088,4433261-4433370,
4433604-4433795
Length = 377
Score = 39.9 bits (89), Expect = 6e-04
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +1
Query: 10 EPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXT 153
EPTSGN GIG+A A+ G + P S E+ T+ GA++V T
Sbjct: 125 EPTSGNMGIGLAFMAALKGYELILTMPSYTSLERRVTMRAFGAKLVLT 172
Score = 33.5 bits (73), Expect = 0.050
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 234 ILRSVQEDVNPRTHYEYTAEEILA-LXPDVDMIVMGSGTGGT 356
+L+ + N + HYE T EI VD+ VMG G+GGT
Sbjct: 197 MLQQFENPANVKVHYETTGPEIWEDTLGQVDIFVMGIGSGGT 238
>06_03_0488 -
21361131-21361226,21361922-21362124,21362252-21362410,
21362694-21362813,21365602-21365801,21366243-21366286
Length = 273
Score = 36.3 bits (80), Expect = 0.007
Identities = 24/73 (32%), Positives = 32/73 (43%)
Frame = +1
Query: 10 EPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXTPAMAPWESSEHF 189
E TSGN GIG+A G V P+ +K I LGAEV T P+ + E
Sbjct: 34 EATSGNLGIGLAAVAIQKGYKFIAVIPNSYPPDKQKLIKYLGAEVRITE--GPYRNMEKK 91
Query: 190 LSVAKRRLLEDPN 228
+ K+ + N
Sbjct: 92 VEELKKSIKNSYN 104
>02_02_0105 +
6810839-6810913,6811005-6811132,6811562-6811764,
6811829-6811957,6812348-6812506,6812610-6812695,
6812908-6813042
Length = 304
Score = 36.3 bits (80), Expect = 0.007
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 16 TSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXT-PAM 162
TSGN GIGVA A G V P K S +K + LG EV+ PA+
Sbjct: 90 TSGNLGIGVAFVAAQKGYKFIAVMPAKLSIDKQILLRYLGVEVILVDPAL 139
>06_03_0486 -
21344680-21344805,21344922-21345115,21350027-21350185,
21350428-21350553,21350784-21350986,21351169-21351296,
21351631-21351741
Length = 348
Score = 35.1 bits (77), Expect = 0.016
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +1
Query: 10 EPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXT 153
EPT GN G G+ L G V P S +K + LGAEV+ T
Sbjct: 100 EPTGGNLGTGLVLVAIQRGYRFIAVMPAGYSLDKQMLLRFLGAEVILT 147
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 261 NPRTHYEYTAEEILA-LXPDVDMIVMGSGTGGT 356
NP H+++T EI VD+ V +GTGGT
Sbjct: 181 NPDAHFKWTGPEIWKDTAGKVDIFVTAAGTGGT 213
>06_01_0359 +
2578179-2578291,2578950-2579152,2579319-2579444,
2579742-2579900,2580058-2580251,2580382-2580507
Length = 306
Score = 34.7 bits (76), Expect = 0.022
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 10 EPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEV 144
EPTSGN G+G+ L G V P + S +K + +GAE+
Sbjct: 58 EPTSGNLGLGLVLVALRKGYRFVAVMPGQYSFDKQILLKYMGAEL 102
Score = 27.9 bits (59), Expect = 2.5
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +3
Query: 231 NILRSVQEDVNPRTHYEYTAEEILA-LXPDVDMIVMGSGTGGT 356
++L N H T EI VD+ V GSG+GGT
Sbjct: 129 HVLNQFSNPANQEAHMRLTGPEIWKDTAGKVDIFVTGSGSGGT 171
>03_05_0901 +
28635672-28636094,28637623-28637802,28637903-28638172,
28638506-28638757,28639205-28639453,28639533-28639606,
28639798-28639915,28640421-28640555,28640813-28640965
Length = 617
Score = 28.7 bits (61), Expect = 1.4
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 16 TSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVV 147
++GN GVAL+ G IV P + K ++ LGA VV
Sbjct: 170 SAGNHAQGVALSAQRLGCDAVIVMPVTTPEIKWRSVERLGATVV 213
>03_02_0162 +
6053144-6053365,6053474-6053548,6054477-6054623,
6054749-6055300,6055387-6055622,6055914-6056130
Length = 482
Score = 28.7 bits (61), Expect = 1.4
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 4 IHEPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKM 114
+ E ++G+T I +A+ G C +V PD + EK+
Sbjct: 112 VTEGSAGSTAISLAIVAPAYGCKCHVVIPDDAAIEKV 148
Score = 26.2 bits (55), Expect = 7.6
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +3
Query: 261 NPRTHYEYTAEEILALXP-DVDMIVMGSGTGGT 356
N R HYE+T EI + V +GTGGT
Sbjct: 291 NYRAHYEWTGPEIWQQSKGTLHAFVAAAGTGGT 323
>01_05_0706 +
24457148-24458031,24458621-24458822,24458896-24459080,
24459170-24459503,24459614-24459818,24460022-24460128,
24460220-24460381
Length = 692
Score = 28.3 bits (60), Expect = 1.9
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 22 GNTGIGVALATAVCGXGCTIVTPDKNS-DEKMSTISLLGAEVVXTPAMAPWES 177
G+ G+ V ++ CT++TP NS + +++ L V +P +A E+
Sbjct: 601 GSPGVSVVYFMSIMNQQCTLITPSVNSLCSECPSLNFLKVNVEDSPMVAKAEN 653
>01_01_0933 -
7368672-7368785,7368860-7368895,7369581-7369715,
7369825-7369989,7370060-7370140,7370316-7370391,
7370479-7370612,7370706-7370798,7371860-7372188,
7372290-7372350,7372407-7372778
Length = 531
Score = 27.5 bits (58), Expect = 3.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 186 FLVSS*KKTTRRSERNILRSVQEDVNP 266
FL SS + T +R + + ++Q+DVNP
Sbjct: 247 FLCSSSEMTRKRPSTDFMETIQKDVNP 273
>01_05_0791 +
25267885-25267930,25268258-25268713,25268802-25268832,
25268949-25269255
Length = 279
Score = 27.1 bits (57), Expect = 4.3
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -2
Query: 92 SGVTMVHPNPQTAVAKATPIPVFPDVGS 9
S T+ P P T TP P PD G+
Sbjct: 189 SPTTLPPPTPMTPTTPMTPTPTTPDTGT 216
>04_04_0753 -
27797298-27797547,27797765-27797951,27798040-27798113,
27798719-27798949,27799047-27799133,27799244-27799434
Length = 339
Score = 26.2 bits (55), Expect = 7.6
Identities = 24/73 (32%), Positives = 33/73 (45%)
Frame = +1
Query: 16 TSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXTPAMAPWESSEHFLS 195
+SGN VALA + G IV P K+ + G ++ + ES E S
Sbjct: 92 SSGNHAAAVALAAKLRGIPAYIVIPRNAPACKVDNVKRYGGHIIWSDVSI--ESRE---S 146
Query: 196 VAKRRLLEDPNAI 234
VAK R+ E+ AI
Sbjct: 147 VAK-RVQEETGAI 158
>02_05_0431 + 28933418-28933951,28934066-28934213,28934729-28935030
Length = 327
Score = 26.2 bits (55), Expect = 7.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 16 TSGNTGIGVALATAVCGXGCTIVTPDKNS 102
T G++GIG+A+ATA G + +N+
Sbjct: 42 TGGSSGIGLAMATAAAREGARVSILARNA 70
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,707,506
Number of Sequences: 37544
Number of extensions: 142840
Number of successful extensions: 379
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 379
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 542368620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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