Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20244
(357 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024136-1|AAF35961.1| 755|Caenorhabditis elegans Hypothetical ... 77 3e-15
Z72518-3|CAB63415.2| 704|Caenorhabditis elegans Hypothetical pr... 70 6e-13
Z49131-7|CAA88980.3| 704|Caenorhabditis elegans Hypothetical pr... 70 6e-13
Z78415-10|CAB01676.2| 341|Caenorhabditis elegans Hypothetical p... 46 1e-05
Z83236-2|CAB05778.1| 337|Caenorhabditis elegans Hypothetical pr... 36 0.006
U97004-6|AAO26010.1| 304|Caenorhabditis elegans Hypothetical pr... 33 0.044
U97004-4|AAB52276.1| 337|Caenorhabditis elegans Hypothetical pr... 33 0.044
AF016425-2|AAB65342.1| 337|Caenorhabditis elegans Hypothetical ... 30 0.55
Z70683-3|CAA94589.1| 435|Caenorhabditis elegans Hypothetical pr... 29 0.72
Z92784-5|CAB07196.3| 554|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z80219-2|CAB02298.1| 317|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z66512-1|CAA91322.1| 638|Caenorhabditis elegans Hypothetical pr... 27 3.9
U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family... 27 3.9
U52002-2|AAB37728.1| 1544|Caenorhabditis elegans Cadherin family... 27 3.9
AL132865-12|CAB60601.1| 345|Caenorhabditis elegans Hypothetical... 27 3.9
Z99267-1|CAB16465.1| 732|Caenorhabditis elegans C33A12.12 protein. 27 5.1
Z68493-14|CAA92801.1| 732|Caenorhabditis elegans Hypothetical p... 27 5.1
U39743-1|AAA80436.2| 314|Caenorhabditis elegans Hypothetical pr... 27 5.1
U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical pr... 27 5.1
AL033537-1|CAA22147.1| 732|Caenorhabditis elegans Hypothetical ... 27 5.1
AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical ... 27 5.1
AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical ... 27 5.1
Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical pr... 26 6.7
Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical pr... 26 6.7
Z81117-11|CAC42336.1| 383|Caenorhabditis elegans Hypothetical p... 26 8.9
Z81117-10|CAB03311.1| 384|Caenorhabditis elegans Hypothetical p... 26 8.9
Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical pr... 26 8.9
U21282-1|AAA84395.1| 385|Caenorhabditis elegans cyclin B3 protein. 26 8.9
>AC024136-1|AAF35961.1| 755|Caenorhabditis elegans Hypothetical
protein F54A3.4 protein.
Length = 755
Score = 77.4 bits (182), Expect = 3e-15
Identities = 39/80 (48%), Positives = 50/80 (62%)
Frame = +1
Query: 10 EPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXTPAMAPWESSEHF 189
EPTSGNTGIG++L AV G C I P+K S EK +T+S+LG+ +V TP A + S
Sbjct: 408 EPTSGNTGIGLSLVAAVRGYKCLITMPEKMSKEKSTTLSVLGSTIVRTPNEAAFNSPSSH 467
Query: 190 LSVAKRRLLEDPNAISCDQY 249
+ VA R E P A+ DQY
Sbjct: 468 IGVALRLKHEIPGAVILDQY 487
Score = 41.9 bits (94), Expect = 1e-04
Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 2/34 (5%)
Frame = +3
Query: 261 NPRTHYEYTAEEILALXPD--VDMIVMGSGTGGT 356
NP HYE TAEEIL D +D++V+G+GTGGT
Sbjct: 492 NPLAHYEETAEEILWDMGDRKIDLVVLGAGTGGT 525
>Z72518-3|CAB63415.2| 704|Caenorhabditis elegans Hypothetical
protein ZC373.1 protein.
Length = 704
Score = 69.7 bits (163), Expect = 6e-13
Identities = 36/80 (45%), Positives = 49/80 (61%)
Frame = +1
Query: 10 EPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXTPAMAPWESSEHF 189
EPTSGNTGIG++LA+AV G C I P K S EK ++ LG+ ++ TP A ++S
Sbjct: 449 EPTSGNTGIGLSLASAVRGYKCIITMPKKMSKEKSIAMASLGSTIIRTPNEAGFDSPHSH 508
Query: 190 LSVAKRRLLEDPNAISCDQY 249
+ VA R E +A+ DQY
Sbjct: 509 IGVALRLKSEIQDAVVLDQY 528
Score = 38.3 bits (85), Expect = 0.002
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Frame = +3
Query: 261 NPRTHYEYTAEEILALXPD--VDMIVMGSGTGGT 356
NP HYE TAEEI+ D +D++V+ +GTGGT
Sbjct: 533 NPLAHYEETAEEIIYDMGDKHIDLVVLTAGTGGT 566
>Z49131-7|CAA88980.3| 704|Caenorhabditis elegans Hypothetical
protein ZC373.1 protein.
Length = 704
Score = 69.7 bits (163), Expect = 6e-13
Identities = 36/80 (45%), Positives = 49/80 (61%)
Frame = +1
Query: 10 EPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXTPAMAPWESSEHF 189
EPTSGNTGIG++LA+AV G C I P K S EK ++ LG+ ++ TP A ++S
Sbjct: 449 EPTSGNTGIGLSLASAVRGYKCIITMPKKMSKEKSIAMASLGSTIIRTPNEAGFDSPHSH 508
Query: 190 LSVAKRRLLEDPNAISCDQY 249
+ VA R E +A+ DQY
Sbjct: 509 IGVALRLKSEIQDAVVLDQY 528
Score = 38.3 bits (85), Expect = 0.002
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Frame = +3
Query: 261 NPRTHYEYTAEEILALXPD--VDMIVMGSGTGGT 356
NP HYE TAEEI+ D +D++V+ +GTGGT
Sbjct: 533 NPLAHYEETAEEIIYDMGDKHIDLVVLTAGTGGT 566
>Z78415-10|CAB01676.2| 341|Caenorhabditis elegans Hypothetical
protein C17G1.7 protein.
Length = 341
Score = 45.6 bits (103), Expect = 1e-05
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +1
Query: 10 EPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXT 153
EPTSGNTGI +A A G C + P S E+ + + G+EVV T
Sbjct: 74 EPTSGNTGIALAFVAAAKGYRCIVTMPASMSGERRTLLKAYGSEVVLT 121
>Z83236-2|CAB05778.1| 337|Caenorhabditis elegans Hypothetical
protein K10H10.2 protein.
Length = 337
Score = 36.3 bits (80), Expect = 0.006
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 10 EPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXT-PAMA 165
EPTSGN GI +A + G + P S E+ + GAEV+ T PA A
Sbjct: 73 EPTSGNMGIALAYCGKLRGYKVILTMPASMSIERRCLLKAYGAEVILTDPATA 125
Score = 30.7 bits (66), Expect = 0.31
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 234 ILRSVQEDVNPRTHYEYTAEEI-LALXPDVDMIVMGSGTGGT 356
IL NP HY+ T EI VD++ G G+GGT
Sbjct: 145 ILNQFGNPANPEAHYKTTGPEIWRQTQGKVDIVCFGVGSGGT 186
>U97004-6|AAO26010.1| 304|Caenorhabditis elegans Hypothetical
protein R08E5.2c protein.
Length = 304
Score = 33.5 bits (73), Expect = 0.044
Identities = 24/80 (30%), Positives = 37/80 (46%)
Frame = +1
Query: 10 EPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXTPAMAPWESSEHF 189
E TSGN GI +A + G +V P S E+ + + GAEV+ + P E
Sbjct: 73 EGTSGNLGIALAHIGKIRGYKVILVMPATMSVERRAMLRAYGAEVILSD---PAEGHPGV 129
Query: 190 LSVAKRRLLEDPNAISCDQY 249
+ + + + PNA DQ+
Sbjct: 130 IKKVEMLVDKLPNAHCLDQF 149
>U97004-4|AAB52276.1| 337|Caenorhabditis elegans Hypothetical
protein R08E5.2a protein.
Length = 337
Score = 33.5 bits (73), Expect = 0.044
Identities = 24/80 (30%), Positives = 37/80 (46%)
Frame = +1
Query: 10 EPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXTPAMAPWESSEHF 189
E TSGN GI +A + G +V P S E+ + + GAEV+ + P E
Sbjct: 73 EGTSGNLGIALAHIGKIRGYKVILVMPATMSVERRAMLRAYGAEVILSD---PAEGHPGV 129
Query: 190 LSVAKRRLLEDPNAISCDQY 249
+ + + + PNA DQ+
Sbjct: 130 IKKVEMLVDKLPNAHCLDQF 149
>AF016425-2|AAB65342.1| 337|Caenorhabditis elegans Hypothetical
protein F59A7.9 protein.
Length = 337
Score = 29.9 bits (64), Expect = 0.55
Identities = 22/80 (27%), Positives = 36/80 (45%)
Frame = +1
Query: 10 EPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXTPAMAPWESSEHF 189
E TSGN GI +A + G +V S E+ + + GAEV+ + P E
Sbjct: 73 EGTSGNLGIALAHIGRIRGYKVILVMTTAMSIERRAMLRAYGAEVILSD---PAEGHPGI 129
Query: 190 LSVAKRRLLEDPNAISCDQY 249
+ + + + P+A DQ+
Sbjct: 130 VKKIEMLVSKLPDAYCLDQF 149
Score = 29.9 bits (64), Expect = 0.55
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +3
Query: 261 NPRTHYEYTAEEILALXPD-VDMIVMGSGTGGT 356
NP HY T EI VDM+ G G+GGT
Sbjct: 154 NPAAHYRTTGPEIWKQTQGKVDMVCFGVGSGGT 186
>Z70683-3|CAA94589.1| 435|Caenorhabditis elegans Hypothetical
protein F13B12.4 protein.
Length = 435
Score = 29.5 bits (63), Expect = 0.72
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +1
Query: 4 IHEPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXTP 156
+++ TSGNTG A + V D EK+ I G +++ P
Sbjct: 113 VYDSTSGNTGSAEAYMCTLVNVPYYAVVADNLEKEKVKQIESFGGKIIKVP 163
>Z92784-5|CAB07196.3| 554|Caenorhabditis elegans Hypothetical
protein F31C3.6a protein.
Length = 554
Score = 27.1 bits (57), Expect = 3.9
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 116 LIFSSEFLSGVTMVHPNP 63
LIFSSE+ M HP+P
Sbjct: 336 LIFSSEYFDSAQMTHPSP 353
>Z80219-2|CAB02298.1| 317|Caenorhabditis elegans Hypothetical
protein T01H8.2 protein.
Length = 317
Score = 27.1 bits (57), Expect = 3.9
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 16 TSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVV 147
+SGN G +A A G CTIV P K+ + A +V
Sbjct: 79 SSGNHGQALAWAAQKIGLPCTIVVPKNAPISKIEGMREYNANIV 122
>Z66512-1|CAA91322.1| 638|Caenorhabditis elegans Hypothetical
protein F52H3.2 protein.
Length = 638
Score = 27.1 bits (57), Expect = 3.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 22 GNTGIGVALATAVCGXGCTIVTPDKNSDEKMS 117
G+ G A A A CG +VT +KN+ +MS
Sbjct: 25 GHAGCESAAAAARCGSNTVLVTQNKNTIGEMS 56
>U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family
protein 5, isoformb protein.
Length = 1306
Score = 27.1 bits (57), Expect = 3.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 258 VNPRTHYEYTAEEILALXPDVDMIVMGSGTGG 353
V+PRT Y+Y + + L D D + M SG+ G
Sbjct: 1181 VDPRTEYDYETQNVNMLISDED-LTMKSGSIG 1211
>U52002-2|AAB37728.1| 1544|Caenorhabditis elegans Cadherin family
protein 5, isoforma protein.
Length = 1544
Score = 27.1 bits (57), Expect = 3.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 258 VNPRTHYEYTAEEILALXPDVDMIVMGSGTGG 353
V+PRT Y+Y + + L D D + M SG+ G
Sbjct: 1325 VDPRTEYDYETQNVNMLISDED-LTMKSGSIG 1355
>AL132865-12|CAB60601.1| 345|Caenorhabditis elegans Hypothetical
protein Y62E10A.14 protein.
Length = 345
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 210 TTRRSERNILRSVQEDVNPRTHYEYTAEEILALXPDVDMIVMGS 341
TTR SE+ ++ V N R HY + A+ + L D+ +++ S
Sbjct: 120 TTRESEKALVEHVLLHPNQRPHY-FAAQCRMLLVEDISSLILTS 162
>Z99267-1|CAB16465.1| 732|Caenorhabditis elegans C33A12.12 protein.
Length = 732
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -2
Query: 131 SKLIVLIFSSEFLSGVTMVHPNPQTAVAKATPIPVFPDVGS 9
S L+ + ++FL+G +H ++ T +PVFP + S
Sbjct: 615 SSLLTVDCFTDFLTGYYKIHYTKYRELSDPTSVPVFPTLCS 655
>Z68493-14|CAA92801.1| 732|Caenorhabditis elegans Hypothetical
protein C33A12.12 protein.
Length = 732
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -2
Query: 131 SKLIVLIFSSEFLSGVTMVHPNPQTAVAKATPIPVFPDVGS 9
S L+ + ++FL+G +H ++ T +PVFP + S
Sbjct: 615 SSLLTVDCFTDFLTGYYKIHYTKYRELSDPTSVPVFPTLCS 655
>U39743-1|AAA80436.2| 314|Caenorhabditis elegans Hypothetical
protein R173.2 protein.
Length = 314
Score = 26.6 bits (56), Expect = 5.1
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 210 TTRRSERNILRSVQED 257
TT R +RNILRS +ED
Sbjct: 38 TTHRMDRNILRSARED 53
>U29097-9|AAA68416.2| 343|Caenorhabditis elegans Hypothetical
protein F18C5.7 protein.
Length = 343
Score = 26.6 bits (56), Expect = 5.1
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 210 TTRRSERNILRSVQED 257
TT R +RNILRS +ED
Sbjct: 67 TTHRMDRNILRSARED 82
>AL033537-1|CAA22147.1| 732|Caenorhabditis elegans Hypothetical
protein C33A12.12 protein.
Length = 732
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -2
Query: 131 SKLIVLIFSSEFLSGVTMVHPNPQTAVAKATPIPVFPDVGS 9
S L+ + ++FL+G +H ++ T +PVFP + S
Sbjct: 615 SSLLTVDCFTDFLTGYYKIHYTKYRELSDPTSVPVFPTLCS 655
>AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical
protein Y39F10A.4 protein.
Length = 343
Score = 26.6 bits (56), Expect = 5.1
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 210 TTRRSERNILRSVQED 257
TT R +RNILRS +ED
Sbjct: 67 TTHRMDRNILRSARED 82
>AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical
protein T07D3.8 protein.
Length = 343
Score = 26.6 bits (56), Expect = 5.1
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3
Query: 210 TTRRSERNILRSVQED 257
TT R +RNILRS +ED
Sbjct: 67 TTHRMDRNILRSARED 82
>Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical
protein M88.5b protein.
Length = 704
Score = 26.2 bits (55), Expect = 6.7
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -1
Query: 351 HRSLNPSRSYPHQXPRLIFLQQCIRNEF 268
HR+ N S S PH P+ + + +C+ ++
Sbjct: 160 HRNHNQSHSGPHHIPQNLMMPRCMLKDW 187
>Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical
protein M88.5a protein.
Length = 828
Score = 26.2 bits (55), Expect = 6.7
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -1
Query: 351 HRSLNPSRSYPHQXPRLIFLQQCIRNEF 268
HR+ N S S PH P+ + + +C+ ++
Sbjct: 284 HRNHNQSHSGPHHIPQNLMMPRCMLKDW 311
>Z81117-11|CAC42336.1| 383|Caenorhabditis elegans Hypothetical
protein T06E6.2b protein.
Length = 383
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 207 KTTRRSERNILRSVQEDVNPRTHYEYTAEE 296
+T+RR N+ V+P HY+Y EE
Sbjct: 71 RTSRRDVENLPPQKSRYVDPCPHYDYDLEE 100
>Z81117-10|CAB03311.1| 384|Caenorhabditis elegans Hypothetical
protein T06E6.2a protein.
Length = 384
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 207 KTTRRSERNILRSVQEDVNPRTHYEYTAEE 296
+T+RR N+ V+P HY+Y EE
Sbjct: 72 RTSRRDVENLPPQKSRYVDPCPHYDYDLEE 101
>Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical
protein B0393.4 protein.
Length = 803
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 91 DKNSDEKMSTISLLGAEVVXTPAMAPWESSEHF 189
+K E M SLLG +V +++PWE+ F
Sbjct: 717 EKIDVETMRWFSLLGQKVDAEDSVSPWETGTDF 749
>U21282-1|AAA84395.1| 385|Caenorhabditis elegans cyclin B3 protein.
Length = 385
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 207 KTTRRSERNILRSVQEDVNPRTHYEYTAEE 296
+T+RR N+ V+P HY+Y EE
Sbjct: 73 RTSRRDVENLPPQKSRYVDPCPHYDYDLEE 102
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,386,710
Number of Sequences: 27780
Number of extensions: 121488
Number of successful extensions: 370
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 367
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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