Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20244
(357 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g22460.1 68416.m02839 cysteine synthase, putative / O-acetyls... 45 1e-05
At4g14880.2 68417.m02286 cysteine synthase / O-acetylserine (thi... 45 2e-05
At4g14880.1 68417.m02285 cysteine synthase / O-acetylserine (thi... 45 2e-05
At3g03630.1 68416.m00366 cysteine synthase, chloroplast, putativ... 44 2e-05
At3g04940.1 68416.m00536 cysteine synthase, putative / O-acetyls... 43 5e-05
At3g59760.3 68416.m06669 cysteine synthase, mitochondrial, putat... 42 2e-04
At3g59760.2 68416.m06668 cysteine synthase, mitochondrial, putat... 42 2e-04
At3g59760.1 68416.m06667 cysteine synthase, mitochondrial, putat... 42 2e-04
At3g61440.1 68416.m06881 cysteine synthase, putative / O-acetyls... 41 3e-04
At1g55880.2 68414.m06409 pyridoxal-5'-phosphate-dependent enzyme... 40 4e-04
At1g55880.1 68414.m06408 pyridoxal-5'-phosphate-dependent enzyme... 40 4e-04
At2g43750.1 68415.m05439 cysteine synthase, chloroplast / O-acet... 39 9e-04
At5g28020.2 68418.m03375 cysteine synthase, putative / O-acetyls... 39 0.001
At5g28020.1 68418.m03374 cysteine synthase, putative / O-acetyls... 39 0.001
At5g28030.2 68418.m03377 cysteine synthase, putative / O-acetyls... 34 0.024
At5g28030.1 68418.m03376 cysteine synthase, putative / O-acetyls... 34 0.024
At3g10050.1 68416.m01205 threonine ammonia-lyase / threonine deh... 29 0.91
At4g37380.1 68417.m05293 pentatricopeptide (PPR) repeat-containi... 26 6.4
At3g54090.1 68416.m05980 pfkB-type carbohydrate kinase family pr... 26 6.4
At3g26770.1 68416.m03348 short-chain dehydrogenase/reductase (SD... 26 6.4
At5g65140.1 68418.m08194 trehalose-6-phosphate phosphatase, puta... 26 8.5
At4g38960.1 68417.m05520 zinc finger (B-box type) family protein... 26 8.5
At4g38440.1 68417.m05432 expressed protein 26 8.5
>At3g22460.1 68416.m02839 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative nearly identical over 185 amino
acids to SP|P47998 Cysteine synthase (EC 4.2.99.8)
(O-acetylserine sulfhydrylase) (O-acetylserine
(Thiol)-lyase) {Arabidopsis thaliana}
Length = 188
Score = 45.2 bits (102), Expect = 1e-05
Identities = 26/81 (32%), Positives = 40/81 (49%)
Frame = +1
Query: 10 EPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXTPAMAPWESSEHF 189
EPTSGNTG+G+A A G I P S E+ + GAE++ T P + +
Sbjct: 75 EPTSGNTGVGLAFTAAAKGYKLVITMPASMSIERRIILLAFGAELILTD---PAKGMKGA 131
Query: 190 LSVAKRRLLEDPNAISCDQYK 252
++ A+ L + PN Q++
Sbjct: 132 VAKAEEILAKTPNGYMLQQFE 152
Score = 33.9 bits (74), Expect = 0.032
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 234 ILRSVQEDVNPRTHYEYTAEEI-LALXPDVDMIVMGSGTGGT 356
+L+ + NP+ HYE T EI VD V G GTGGT
Sbjct: 147 MLQQFENPANPKIHYETTGPEIWKGSGGKVDGFVSGIGTGGT 188
>At4g14880.2 68417.m02286 cysteine synthase / O-acetylserine
(thiol)-lyase / O-acetylserine sulfhydrylase (OAS1)
nearly identical to SP|P47998 Cysteine synthase (EC
4.2.99.8) (O-acetylserine sulfhydrylase) (O-acetylserine
(Thiol)-lyase) {Arabidopsis thaliana}; identical to cDNA
O-acetylserine lyase (At.OAS.5-8) GI:6983573
Length = 322
Score = 44.8 bits (101), Expect = 2e-05
Identities = 26/81 (32%), Positives = 39/81 (48%)
Frame = +1
Query: 10 EPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXTPAMAPWESSEHF 189
EPTSGNTG+G+A A G I P S E+ + G E+V T P + +
Sbjct: 72 EPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTD---PAKGMKGA 128
Query: 190 LSVAKRRLLEDPNAISCDQYK 252
++ A+ L + PN Q++
Sbjct: 129 IAKAEEILAKTPNGYMLQQFE 149
Score = 33.9 bits (74), Expect = 0.032
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 234 ILRSVQEDVNPRTHYEYTAEEI-LALXPDVDMIVMGSGTGGT 356
+L+ + NP+ HYE T EI +D V G GTGGT
Sbjct: 144 MLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGT 185
>At4g14880.1 68417.m02285 cysteine synthase / O-acetylserine
(thiol)-lyase / O-acetylserine sulfhydrylase (OAS1)
nearly identical to SP|P47998 Cysteine synthase (EC
4.2.99.8) (O-acetylserine sulfhydrylase) (O-acetylserine
(Thiol)-lyase) {Arabidopsis thaliana}; identical to cDNA
O-acetylserine lyase (At.OAS.5-8) GI:6983573
Length = 322
Score = 44.8 bits (101), Expect = 2e-05
Identities = 26/81 (32%), Positives = 39/81 (48%)
Frame = +1
Query: 10 EPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXTPAMAPWESSEHF 189
EPTSGNTG+G+A A G I P S E+ + G E+V T P + +
Sbjct: 72 EPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTD---PAKGMKGA 128
Query: 190 LSVAKRRLLEDPNAISCDQYK 252
++ A+ L + PN Q++
Sbjct: 129 IAKAEEILAKTPNGYMLQQFE 149
Score = 33.9 bits (74), Expect = 0.032
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 234 ILRSVQEDVNPRTHYEYTAEEI-LALXPDVDMIVMGSGTGGT 356
+L+ + NP+ HYE T EI +D V G GTGGT
Sbjct: 144 MLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGT 185
>At3g03630.1 68416.m00366 cysteine synthase, chloroplast, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative identical to SP|O22682 Probable
cysteine synthase, chloroplast precursor {Arabidopsis
thaliana}, similar to SP|P31300 Cysteine synthase,
chloroplast precursor {Capsicum annuum}
Length = 404
Score = 44.4 bits (100), Expect = 2e-05
Identities = 26/80 (32%), Positives = 40/80 (50%)
Frame = +1
Query: 10 EPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXTPAMAPWESSEHF 189
EPT+GNTG+G+A A G + P + E+ + LGAE+V T P + +
Sbjct: 166 EPTTGNTGLGIAFVAAAKGYKLIVTMPASINIERRMLLRALGAEIVLT---NPEKGLKGA 222
Query: 190 LSVAKRRLLEDPNAISCDQY 249
+ AK +L+ NA Q+
Sbjct: 223 VDKAKEIVLKTKNAYMFQQF 242
>At3g04940.1 68416.m00536 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative similar to O-acetylserine(thiol)
lyase (EC 4.2.99.8) [Brassica juncea] GI:2245144;
contains Pfam profile PF00291: Pyridoxal-phosphate
dependent enzyme
Length = 324
Score = 43.2 bits (97), Expect = 5e-05
Identities = 27/81 (33%), Positives = 41/81 (50%)
Frame = +1
Query: 10 EPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXTPAMAPWESSEHF 189
E TSGNTGIG+A A G + P S E+ + LGAEV T P + +
Sbjct: 75 EATSGNTGIGLAFIGAAKGYKVVLTMPSSMSLERKIILLALGAEVHLTD---PSKGVQGI 131
Query: 190 LSVAKRRLLEDPNAISCDQYK 252
+ A+ ++P++I +Q+K
Sbjct: 132 IDKAEEICSKNPDSIMLEQFK 152
Score = 35.5 bits (78), Expect = 0.010
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 234 ILRSVQEDVNPRTHYEYTAEEILA-LXPDVDMIVMGSGTGGT 356
+L + NP+THY T EI +VD++V G GTGGT
Sbjct: 147 MLEQFKNPSNPQTHYRTTGPEIWRDSAGEVDILVAGVGTGGT 188
>At3g59760.3 68416.m06669 cysteine synthase, mitochondrial, putative
/ O-acetylserine (thiol)-lyase, putative /
O-acetylserine sulfhydrylase, putative similar to
SP|Q43725 Cysteine synthase, mitochondrial precursor (EC
4.2.99.8) (O- acetylserine sulfhydrylase)
(O-acetylserine (Thiol)-lyase) {Arabidopsis thaliana}
Length = 430
Score = 41.5 bits (93), Expect = 2e-04
Identities = 27/80 (33%), Positives = 37/80 (46%)
Frame = +1
Query: 10 EPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXTPAMAPWESSEHF 189
EPTSGNTGIG+A A G + P S E+ + GAE+V T P +
Sbjct: 180 EPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTD---PAKGMTGA 236
Query: 190 LSVAKRRLLEDPNAISCDQY 249
+ A+ L P+A Q+
Sbjct: 237 VQKAEEILKNTPDAYMLQQF 256
Score = 34.3 bits (75), Expect = 0.024
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 234 ILRSVQEDVNPRTHYEYTAEEIL-ALXPDVDMIVMGSGTGGT 356
+L+ NP+ HYE T EI VD+ V G GTGGT
Sbjct: 252 MLQQFDNPANPKIHYETTGPEIWDDTKGKVDIFVAGIGTGGT 293
>At3g59760.2 68416.m06668 cysteine synthase, mitochondrial, putative
/ O-acetylserine (thiol)-lyase, putative /
O-acetylserine sulfhydrylase, putative similar to
SP|Q43725 Cysteine synthase, mitochondrial precursor (EC
4.2.99.8) (O- acetylserine sulfhydrylase)
(O-acetylserine (Thiol)-lyase) {Arabidopsis thaliana}
Length = 432
Score = 41.5 bits (93), Expect = 2e-04
Identities = 27/80 (33%), Positives = 37/80 (46%)
Frame = +1
Query: 10 EPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXTPAMAPWESSEHF 189
EPTSGNTGIG+A A G + P S E+ + GAE+V T P +
Sbjct: 180 EPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTD---PAKGMTGA 236
Query: 190 LSVAKRRLLEDPNAISCDQY 249
+ A+ L P+A Q+
Sbjct: 237 VQKAEEILKNTPDAYMLQQF 256
Score = 34.3 bits (75), Expect = 0.024
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 234 ILRSVQEDVNPRTHYEYTAEEIL-ALXPDVDMIVMGSGTGGT 356
+L+ NP+ HYE T EI VD+ V G GTGGT
Sbjct: 252 MLQQFDNPANPKIHYETTGPEIWDDTKGKVDIFVAGIGTGGT 293
>At3g59760.1 68416.m06667 cysteine synthase, mitochondrial, putative
/ O-acetylserine (thiol)-lyase, putative /
O-acetylserine sulfhydrylase, putative similar to
SP|Q43725 Cysteine synthase, mitochondrial precursor (EC
4.2.99.8) (O- acetylserine sulfhydrylase)
(O-acetylserine (Thiol)-lyase) {Arabidopsis thaliana}
Length = 433
Score = 41.5 bits (93), Expect = 2e-04
Identities = 27/80 (33%), Positives = 37/80 (46%)
Frame = +1
Query: 10 EPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXTPAMAPWESSEHF 189
EPTSGNTGIG+A A G + P S E+ + GAE+V T P +
Sbjct: 180 EPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTD---PAKGMTGA 236
Query: 190 LSVAKRRLLEDPNAISCDQY 249
+ A+ L P+A Q+
Sbjct: 237 VQKAEEILKNTPDAYMLQQF 256
Score = 34.3 bits (75), Expect = 0.024
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 234 ILRSVQEDVNPRTHYEYTAEEIL-ALXPDVDMIVMGSGTGGT 356
+L+ NP+ HYE T EI VD+ V G GTGGT
Sbjct: 252 MLQQFDNPANPKIHYETTGPEIWDDTKGKVDIFVAGIGTGGT 293
>At3g61440.1 68416.m06881 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative identical to cysteine synthase
(EC 4.2.99.8) [Arabidopsis thaliana] GI:5824334;
contains Pfam profile PF00291: Pyridoxal-phosphate
dependent enzyme
Length = 368
Score = 40.7 bits (91), Expect = 3e-04
Identities = 27/80 (33%), Positives = 37/80 (46%)
Frame = +1
Query: 10 EPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXTPAMAPWESSEHF 189
EPTSGN GI +A A+ G + P S E+ T+ GAE+V T P +
Sbjct: 116 EPTSGNMGISLAFMAAMKGYRIIMTMPSYTSLERRVTMRSFGAELVLTD---PAKGMGGT 172
Query: 190 LSVAKRRLLEDPNAISCDQY 249
+ A L P+A C Q+
Sbjct: 173 VKKAYDLLDSTPDAFMCQQF 192
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 261 NPRTHYEYTAEEILA-LXPDVDMIVMGSGTGGT 356
N + H++ T EI +VD+ VMG G+GGT
Sbjct: 197 NTQIHFDTTGPEIWEDTLGNVDIFVMGIGSGGT 229
>At1g55880.2 68414.m06409 pyridoxal-5'-phosphate-dependent enzyme,
beta family protein similar to SP|P50867 Cysteine
synthase (EC 4.2.99.8) (O-acetylserine sulfhydrylase)
(O-acetylserine (Thiol)-lyase) [Aspergillus nidulans]
{Emericella nidulans}; contains Pfam profile PF00291:
Pyridoxal-phosphate dependent enzyme
Length = 348
Score = 40.3 bits (90), Expect = 4e-04
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +1
Query: 4 IHEPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXTPAMAPWESSE 183
+ E ++G+T I +A G C +V PD + EK I LGA V ++ +
Sbjct: 104 VTEGSAGSTAISLATVAPAYGCKCHVVIPDDAAIEKSQIIEALGASVERVRPVS-ITHKD 162
Query: 184 HFLSVAKRR 210
H++++A+RR
Sbjct: 163 HYVNIARRR 171
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 261 NPRTHYEYTAEEIL-ALXPDVDMIVMGSGTGGT 356
N R HYE T EI ++D V +GTGGT
Sbjct: 228 NYRAHYEGTGPEIWHQTQGNIDAFVAAAGTGGT 260
>At1g55880.1 68414.m06408 pyridoxal-5'-phosphate-dependent enzyme,
beta family protein similar to SP|P50867 Cysteine
synthase (EC 4.2.99.8) (O-acetylserine sulfhydrylase)
(O-acetylserine (Thiol)-lyase) [Aspergillus nidulans]
{Emericella nidulans}; contains Pfam profile PF00291:
Pyridoxal-phosphate dependent enzyme
Length = 421
Score = 40.3 bits (90), Expect = 4e-04
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = +1
Query: 4 IHEPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXTPAMAPWESSE 183
+ E ++G+T I +A G C +V PD + EK I LGA V ++ +
Sbjct: 104 VTEGSAGSTAISLATVAPAYGCKCHVVIPDDAAIEKSQIIEALGASVERVRPVS-ITHKD 162
Query: 184 HFLSVAKRR 210
H++++A+RR
Sbjct: 163 HYVNIARRR 171
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 261 NPRTHYEYTAEEIL-ALXPDVDMIVMGSGTGGT 356
N R HYE T EI ++D V +GTGGT
Sbjct: 228 NYRAHYEGTGPEIWHQTQGNIDAFVAAAGTGGT 260
>At2g43750.1 68415.m05439 cysteine synthase, chloroplast /
O-acetylserine (thiol)-lyase / O-acetylserine
sulfhydrylase / cpACS1 (OASB) identical to SP|P47999
Cysteine synthase, chloroplast precursor (EC 4.2.99.8)
(O-acetylserine sulfhydrylase) (O-acetylserine
(Thiol)-lyase) (cpACS1) {Arabidopsis thaliana};
identical to cDNA O-acetylserine lyase (At.OAS.7-4)
GI:6983575
Length = 392
Score = 39.1 bits (87), Expect = 9e-04
Identities = 26/80 (32%), Positives = 37/80 (46%)
Frame = +1
Query: 10 EPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXTPAMAPWESSEHF 189
E TSGNTGIG+A A G + P S E+ + GAE+V T P +
Sbjct: 142 ESTSGNTGIGLAFIAASKGYKLILTMPASMSLERRVLLRAFGAELVLT---EPAKGMTGA 198
Query: 190 LSVAKRRLLEDPNAISCDQY 249
+ A+ L + PN+ Q+
Sbjct: 199 IQKAEEILKKTPNSYMLQQF 218
Score = 35.1 bits (77), Expect = 0.014
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 234 ILRSVQEDVNPRTHYEYTAEEILA-LXPDVDMIVMGSGTGGT 356
+L+ NP+ HYE T EI +D++V G GTGGT
Sbjct: 214 MLQQFDNPANPKIHYETTGPEIWEDTRGKIDILVAGIGTGGT 255
>At5g28020.2 68418.m03375 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative similar to O-acetylserine(thiol)
lyase (EC 4.2.99.8) [Brassica juncea] GI:2245144;
contains Pfam profile PF00291: Pyridoxal-phosphate
dependent enzyme
Length = 323
Score = 38.7 bits (86), Expect = 0.001
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = +1
Query: 10 EPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEV 144
EPT+GNTGIG+A A G +V P S E+ + LGAE+
Sbjct: 74 EPTAGNTGIGLACMGAARGYKVILVMPSTMSLERRIILRALGAEL 118
>At5g28020.1 68418.m03374 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative similar to O-acetylserine(thiol)
lyase (EC 4.2.99.8) [Brassica juncea] GI:2245144;
contains Pfam profile PF00291: Pyridoxal-phosphate
dependent enzyme
Length = 323
Score = 38.7 bits (86), Expect = 0.001
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = +1
Query: 10 EPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEV 144
EPT+GNTGIG+A A G +V P S E+ + LGAE+
Sbjct: 74 EPTAGNTGIGLACMGAARGYKVILVMPSTMSLERRIILRALGAEL 118
>At5g28030.2 68418.m03377 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative similar to O-acetylserine(thiol)
lyase [Brassica juncea] GI:2245144; contains Pfam
profile PF00291: Pyridoxal-phosphate dependent enzyme
Length = 323
Score = 34.3 bits (75), Expect = 0.024
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = +1
Query: 10 EPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXT 153
E T GNTGIG+A A G ++ P S E+ + LGAEV T
Sbjct: 74 EATGGNTGIGLASIGASRGYKVILLMPSTMSLERRIILRALGAEVHLT 121
>At5g28030.1 68418.m03376 cysteine synthase, putative /
O-acetylserine (thiol)-lyase, putative / O-acetylserine
sulfhydrylase, putative similar to O-acetylserine(thiol)
lyase [Brassica juncea] GI:2245144; contains Pfam
profile PF00291: Pyridoxal-phosphate dependent enzyme
Length = 323
Score = 34.3 bits (75), Expect = 0.024
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = +1
Query: 10 EPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVVXT 153
E T GNTGIG+A A G ++ P S E+ + LGAEV T
Sbjct: 74 EATGGNTGIGLASIGASRGYKVILLMPSTMSLERRIILRALGAEVHLT 121
>At3g10050.1 68416.m01205 threonine ammonia-lyase / threonine
dehydratase / threonine deaminase (OMR1) identical to
SP|Q9ZSS6 Threonine dehydratase biosynthetic,
chloroplast precursor (EC 4.3.1.19, formerly EC
4.2.1.16) (Threonine deaminase) (TD) {Arabidopsis
thaliana}
Length = 592
Score = 29.1 bits (62), Expect = 0.91
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 16 TSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAEVV 147
++GN GVAL+ + G IV P + K + LGA VV
Sbjct: 165 SAGNHAQGVALSASKLGCTAVIVMPVTTPEIKWQAVENLGATVV 208
>At4g37380.1 68417.m05293 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 632
Score = 26.2 bits (55), Expect = 6.4
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = -2
Query: 218 SSSLLLATDKKCSELSQGAMAGV*TTSAPSKLIVLIFSSEFLSGVTMVH 72
+SS LLAT ++LS A A P KL VLI S+ + V +H
Sbjct: 2 ASSPLLATSLPQNQLSTTATARF-RLPPPEKLAVLIDKSQSVDEVLQIH 49
>At3g54090.1 68416.m05980 pfkB-type carbohydrate kinase family
protein contains Pfam profile: PF00294 pfkB family
carbohydrate kinase
Length = 471
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +3
Query: 261 NPRTHYEYTAEEILALXPD-VDMIVMGSGT 347
N R +Y YT EEI +L D + ++V+ GT
Sbjct: 342 NRRDYYHYTPEEIKSLWHDKLKLLVVTDGT 371
>At3g26770.1 68416.m03348 short-chain dehydrogenase/reductase (SDR)
family protein similar to sex determination protein
tasselseed 2 SP:P50160 from [Zea mays]
Length = 306
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 16 TSGNTGIGVALATAVCGXGCTIVTPDKNSDEKMSTISLLGAE 141
T G +G+G A A+ G +V D +++ T LG+E
Sbjct: 49 TGGASGLGKATASEFLRHGARVVIADLDAETGTKTAKELGSE 90
>At5g65140.1 68418.m08194 trehalose-6-phosphate phosphatase,
putative similar to trehalose-6-phosphate phosphatase
(AtTPPB) [Arabidopsis thaliana] GI:2944180; contains
Pfam profile PF02358: Trehalose-phosphatase
Length = 370
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +1
Query: 118 TISLLGAEVVXTPAMAPWESSEHFLSVAKRRLLEDPNAISCDQYKKM 258
T+S + V TP ++ ++SV+K++LL++ DQ +++
Sbjct: 17 TVSTVSNSSVFTPTAQKPPTAPGYISVSKKKLLKNLEINGADQSQRL 63
>At4g38960.1 68417.m05520 zinc finger (B-box type) family protein
zinc finger protein - Oryza sativa, PID:d1034167
Length = 183
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +1
Query: 1 KIHEPTSGNTGIGVALATAVCGXGCTIVTPDKNSDEK 111
++HEP+S N GI V G V P K EK
Sbjct: 147 RVHEPSSNNNGIDVNNENNHEPAGLVPVGPFKRESEK 183
>At4g38440.1 68417.m05432 expressed protein
Length = 1465
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +1
Query: 154 PAMAPWESSEHFLSVAKRRLLEDPNAISCDQYKKMLILELITNTLLKKY 300
PA+ W S F + ++ L+ + ++S + Y L+LE TL Y
Sbjct: 698 PALCLWLSCPSFEKLREKNLISEFTSVSNEAY---LVLEAFAETLPNMY 743
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,964,782
Number of Sequences: 28952
Number of extensions: 113106
Number of successful extensions: 346
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 345
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 459356736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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