Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20239
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    25   0.33 
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   1.3  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   3.1  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   4.1  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   9.4  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 25.4 bits (53), Expect = 0.33
 Identities = 13/51 (25%), Positives = 25/51 (49%)
 Frame = +1

Query: 343 VATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVY 495
           +  +  +D K E H+E+  A + E+R+  +   +G+  T   L    + VY
Sbjct: 172 IVGESVIDEKAEEHKEQFTALVREIRNAFRH--DGLLLTMSVLPNVNSSVY 220


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +2

Query: 59  AMEVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSP 184
           A    T  T+++  + S       V  A P G+P P  + SP
Sbjct: 194 ASRTTTSPTKVKASKASPAAAPRSV--ATPTGIPTPSTSASP 233



 Score = 21.8 bits (44), Expect = 4.1
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 186 SGESARRGTGTPTGSASITSYARPP 112
           S  +A R   TPTG  + ++ A PP
Sbjct: 210 SPAAAPRSVATPTGIPTPSTSASPP 234


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 19/67 (28%), Positives = 25/67 (37%)
 Frame = +1

Query: 343 VATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEVX*PQ 522
           VA  + LD     H E+  + + ELR   K   E +  T   L    + VY       P 
Sbjct: 180 VAGDKVLDENAAEHREQFVSLVRELRGAFK--AENLLVTLTVLPNVNSTVYYDPRALSPN 237

Query: 523 LPTSVTE 543
           L   V E
Sbjct: 238 LEFVVLE 244


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/27 (29%), Positives = 12/27 (44%)
 Frame = -1

Query: 524 SCGHXTSMALYTSAVCCSRVNLVFSTP 444
           SCG   S   +  ++CC     +  TP
Sbjct: 47  SCGPGQSGQCFGPSICCGPFGCLVGTP 73


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +2

Query: 143 EPVGVPVPRRADSPEKTPSVEEIQEK 220
           +P    V RR   P +   VEE +EK
Sbjct: 254 KPRPTKVSRRKPRPPRPTQVEEEEEK 279


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,118
Number of Sequences: 336
Number of extensions: 1441
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)