Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20237
         (383 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   1.3  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   1.3  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    23   2.9  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    22   6.7  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = -1

Query: 212 GEVHVRIRVYFSPDANYQDDQSRNGKQKIEAKHEVLYTGHSTF 84
           G+V +++R +   D    D  S     K    H  +YTG S F
Sbjct: 733 GQVRIQLRDHLGSDTVAVDGSSIPPLGKFPVIHYEMYTGESFF 775


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = -1

Query: 212 GEVHVRIRVYFSPDANYQDDQSRNGKQKIEAKHEVLYTGHSTF 84
           G+V +++R +   D    D  S     K    H  +YTG S F
Sbjct: 734 GQVRIQLRDHLGSDTVAVDGSSIPPLGKFPVIHYEMYTGESFF 776


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = +3

Query: 108 YLMFCFNLLFAITGLIILIVGIRAEINSYPYMNFTDENFYKFAPIVLI 251
           YL F F +   I+ +++++V + A         FT+ENF     ++ I
Sbjct: 605 YLTFRFWIGTWISIILVVLVAVDASALVCYITRFTEENFACLIAVIFI 652


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = -1

Query: 119 KHEVLYTGHSTFESHCYSIKYYRQIVLLRNKMIHTSANK 3
           +H  ++TG   +       ++ +   L  +KMIH   NK
Sbjct: 257 RHMRIHTGEKPYSCDVCFARFTQSNSLKAHKMIHQVGNK 295


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 384,400
Number of Sequences: 2352
Number of extensions: 6580
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29501847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)