Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20236
         (618 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   2.4  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   2.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   2.4  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              21   7.3  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   7.3  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   9.6  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -1

Query: 507 PRAVQFQSSAVTAGQCMPVYRRCWPGAVC 421
           P  V    +A+T G  M V+  CW    C
Sbjct: 262 PYHVSDHKAAITVGVIMGVFLICWVPFFC 290


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -1

Query: 564 SRGISAIAVWKVLLMLLNIPRAVQF 490
           SR +  I V  +L + L +P+A+QF
Sbjct: 169 SRAVKFIIVIWLLALCLAVPQAIQF 193


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 15/49 (30%), Positives = 20/49 (40%)
 Frame = +3

Query: 351  HRRELANGVRTLDSWLTSAENLLNRQPRANTDDIQAYIDQLLQLNSEIE 497
            HR   AN  +TLD  + S + L        T+ +      L QL S  E
Sbjct: 881  HRPTFANLTQTLDKLIRSPDTLRKIAQNRGTNPLAPDAVDLTQLTSVSE 929


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +2

Query: 242 LKISVRD*EEICR 280
           LKI +RD +EIC+
Sbjct: 22  LKIQLRDVQEICK 34


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 295 GSEFGKKPNAMYEVAMHFDTGVS*PMESE 381
           G+E GK PN   +V  + D  VS   ++E
Sbjct: 372 GAECGKYPNGNTKVGSYIDWIVSQTPDAE 400


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -3

Query: 508 SSCCSISEFSCNSWSMYACISSVLARGCL 422
           + C S    S +  ++  C + V+AR CL
Sbjct: 299 TKCVSGEHLSVSGGALNDCHAEVVARRCL 327


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,140
Number of Sequences: 438
Number of extensions: 3753
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)