Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20235
         (445 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   0.91 
AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    23   4.9  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      22   8.5  
AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase p...    22   8.5  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 25.4 bits (53), Expect = 0.91
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = -1

Query: 181 FSVVKHIWAWPSFIVFKFDIVSILIKIGKMGSCR 80
           F+ ++  W W  F+V     V++ I +G + + R
Sbjct: 206 FTYLRDAWNWLDFVVIALAYVTMGIDLGNLAALR 239



 Score = 23.4 bits (48), Expect = 3.7
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +2

Query: 251 RYKAEKLARFEKKQKKLET-VQDEESRGNPEPKITI 355
           R +AE  + F +K+KK E    DE+    P+P  T+
Sbjct: 43  RKRAEGESDFGRKKKKKEIRYDDEDEDEGPQPDPTL 78


>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 23.0 bits (47), Expect = 4.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 152 PSPDMFNYREGFLQSCSRI 208
           PS   FNY+E   Q+C R+
Sbjct: 313 PSTTEFNYKELNCQNCGRL 331


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 22.2 bits (45), Expect = 8.5
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 378 PVADSASKIVIFGSGLPLL 322
           P+AD   +    GSGLPLL
Sbjct: 232 PIADLVEQTSGSGSGLPLL 250


>AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase
           protein.
          Length = 687

 Score = 22.2 bits (45), Expect = 8.5
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +2

Query: 362 ALSATGLXSIRYAKEIP 412
           A+ AT L  IR+A+E+P
Sbjct: 60  AVRATTLPDIRFAEELP 76


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 326,638
Number of Sequences: 2352
Number of extensions: 4563
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 37418568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)