Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20234
         (618 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY121690-1|AAM52017.1|  724|Drosophila melanogaster RE53177p pro...    29   6.6  
AE014298-2880|AAF48977.2|  713|Drosophila melanogaster CG14205-P...    29   6.6  
DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut pr...    28   8.8  
DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker p...    28   8.8  
AY119566-1|AAM50220.1|  517|Drosophila melanogaster HL01481p pro...    28   8.8  
AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB...    28   8.8  

>AY121690-1|AAM52017.1|  724|Drosophila melanogaster RE53177p
           protein.
          Length = 724

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +1

Query: 28  AIVILCLFVASLYAADSDVPNDILEEQLY 114
           A++  CLF    YAAD+++P  I+EE  Y
Sbjct: 553 ALLFSCLFAVYGYAADAEIP-PIVEEAFY 580


>AE014298-2880|AAF48977.2|  713|Drosophila melanogaster CG14205-PA
           protein.
          Length = 713

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +1

Query: 28  AIVILCLFVASLYAADSDVPNDILEEQLY 114
           A++  CLF    YAAD+++P  I+EE  Y
Sbjct: 542 ALLFSCLFAVYGYAADAEIP-PIVEEAFY 569


>DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut
            protein.
          Length = 2176

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +2

Query: 449  QLEVNRSVGEQQGLLQDLEHERNQYLVLGV 538
            Q+ +N S  E  GLL   EHER+++L LG+
Sbjct: 1990 QVSLNFSTIEPDGLLLWSEHERSKFLGLGL 2019


>DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker
            protein.
          Length = 2165

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +2

Query: 449  QLEVNRSVGEQQGLLQDLEHERNQYLVLGV 538
            Q+ +N S  E  GLL   EHER+++L LG+
Sbjct: 1979 QVSLNFSTIEPDGLLLWSEHERSKFLGLGL 2008


>AY119566-1|AAM50220.1|  517|Drosophila melanogaster HL01481p
           protein.
          Length = 517

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +2

Query: 449 QLEVNRSVGEQQGLLQDLEHERNQYLVLGV 538
           Q+ +N S  E  GLL   EHER+++L LG+
Sbjct: 331 QVSLNFSTIEPDGLLLWSEHERSKFLGLGL 360


>AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB
            protein.
          Length = 1984

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +2

Query: 449  QLEVNRSVGEQQGLLQDLEHERNQYLVLGV 538
            Q+ +N S  E  GLL   EHER+++L LG+
Sbjct: 1798 QVSLNFSTIEPDGLLLWSEHERSKFLGLGL 1827


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,528,621
Number of Sequences: 53049
Number of extensions: 453145
Number of successful extensions: 1928
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1928
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)