Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20233
(494 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7778| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_39772| Best HMM Match : BAR (HMM E-Value=1.7) 41 5e-04
SB_16705| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.042
SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.52
SB_39389| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.69
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 31 0.69
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.91
SB_41459| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.91
SB_40460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.91
SB_44267| Best HMM Match : DUF602 (HMM E-Value=1.1e-29) 30 1.2
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_13248| Best HMM Match : SCP (HMM E-Value=2.6e-21) 30 1.2
SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_40786| Best HMM Match : WSC (HMM E-Value=0.44) 30 1.2
SB_6335| Best HMM Match : Fer2_BFD (HMM E-Value=1.7) 30 1.2
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_24885| Best HMM Match : HOOK (HMM E-Value=0.00023) 29 2.1
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_18074| Best HMM Match : Trypan_PARP (HMM E-Value=0.081) 29 2.1
SB_50629| Best HMM Match : Extensin_2 (HMM E-Value=0.94) 29 2.8
SB_48825| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_51895| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_47005| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_51630| Best HMM Match : Fz (HMM E-Value=3.3e-34) 28 4.9
SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29) 28 4.9
SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 28 4.9
SB_21461| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_53945| Best HMM Match : POPLD (HMM E-Value=1) 27 6.4
SB_45934| Best HMM Match : Gp-FAR-1 (HMM E-Value=2) 27 6.4
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 27 6.4
SB_38792| Best HMM Match : 7tm_2 (HMM E-Value=2e-13) 27 6.4
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 27 6.4
SB_23088| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6) 27 6.4
SB_15551| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_15319| Best HMM Match : Transposase_9 (HMM E-Value=3.2) 27 6.4
SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_55443| Best HMM Match : Homeobox (HMM E-Value=2.3e-26) 27 6.4
SB_52277| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_42720| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_39566| Best HMM Match : Pyocin_S (HMM E-Value=3.3) 27 6.4
SB_34508| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 27 6.4
SB_33973| Best HMM Match : ABC_tran (HMM E-Value=0) 27 6.4
SB_24167| Best HMM Match : FF (HMM E-Value=9.2) 27 6.4
SB_18429| Best HMM Match : FF (HMM E-Value=9.2) 27 6.4
SB_14693| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27) 27 6.4
SB_42387| Best HMM Match : CH (HMM E-Value=2.7) 27 8.5
SB_16428| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_18393| Best HMM Match : RCSD (HMM E-Value=2.6) 27 8.5
>SB_7778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 461
Score = 41.9 bits (94), Expect = 3e-04
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = +3
Query: 3 KRRDDVKVTKGREQLEEAKRTYEILNSELHDELPALYDSRVLFYVNNLQTLFS-AEQVFH 179
K +D K+ + +E+LE AKR YE LN++L +ELP L+ + + V + F+ A++ FH
Sbjct: 124 KIKDKDKLKQAKEELESAKRNYEALNAQLLEELP-LFRQKTMSLVKDCVLNFAHAKRKFH 182
>SB_39772| Best HMM Match : BAR (HMM E-Value=1.7)
Length = 210
Score = 41.1 bits (92), Expect = 5e-04
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +3
Query: 12 DDVKVTKGREQLEEAKRTYEILNSELHDELPALYDS 119
D K+ + +E+ EAK Y L++EL++ELPALYDS
Sbjct: 82 DQKKLNQCQEEFSEAKSVYTKLHAELYEELPALYDS 117
>SB_16705| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 193
Score = 34.7 bits (76), Expect = 0.042
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 365 PALNGDSPTLSGNKEPAPVKETAPDPKDPGTPVKEPAPVAKEP 493
P LN + P L K +E PD ++PG +EP+ +EP
Sbjct: 53 PGLNTEEPGLDTEKPGIDTEEPGPDTEEPGLDTEEPSLNTEEP 95
Score = 30.7 bits (66), Expect = 0.69
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +2
Query: 365 PALNGDSPTLSGNKEPAPVKETAPDPKDPGTPVKEPAPVAKEP 493
P L+ + P L K +E D + PG +EP P +EP
Sbjct: 39 PGLDTEEPGLDTEKPGLNTEEPGLDTEKPGIDTEEPGPDTEEP 81
>SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 31.1 bits (67), Expect = 0.52
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +2
Query: 356 PPSPALNGDSPTLSGNKEPAPVKETAPDPKDPGTPVKEPA 475
PP P +P P P AP P P PVK+PA
Sbjct: 215 PPEPDYLEPTPPPPAAPAPPPPPAAAPPPPPPPPPVKKPA 254
>SB_39389| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 188
Score = 30.7 bits (66), Expect = 0.69
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 383 SPTLSGNKEPAPVKETAPDPKDPGTPVKEPAPVAKEP 493
S +SGNK PAP P+ ++P + +P PV EP
Sbjct: 69 SAFISGNKMPAP---PLPEIEEPKPEIVQPEPVTAEP 102
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 30.7 bits (66), Expect = 0.69
Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 3/51 (5%)
Frame = +2
Query: 350 QTPPSPALNGDSPTLSGNKEPAPVKETAPDPKDP---GTPVKEPAPVAKEP 493
Q PP P+ G P S P PV AP P P G P P P+ P
Sbjct: 336 QRPPPPS-RGAPPPPSMGMAPPPVGGAAPPPPPPPPVGGPPPPPPPIEGRP 385
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +2
Query: 356 PPSPALNGDSPTLSGNKEPAPVKETAPDPKDPGTP 460
PP P + G P+ GN P P P P P
Sbjct: 376 PPPPPIEGRPPSSLGNPPPPPPPGRGAPPPGPMIP 410
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 30.3 bits (65), Expect = 0.91
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +2
Query: 350 QTPPSPALNGDSPTLSGNKEPAPVKETAPDPKDPGTPV-KEPAPVAKEP 493
QT P+PA +PT K P P T P TP +P P A P
Sbjct: 66 QTTPTPAT--PTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTP 112
>SB_41459| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1675
Score = 30.3 bits (65), Expect = 0.91
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +3
Query: 18 VKVTKGREQLEEAKRTYEILNSELHDELPALYDSRV 125
+ + K +++ + K TYE+L+S++ + P +Y V
Sbjct: 825 IDIVKAYQEILQVKETYEVLSSKMDETFPHIYTHAV 860
>SB_40460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 30.3 bits (65), Expect = 0.91
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +2
Query: 359 PSPALNGDSPTLSGNKEPAPVKETAPDPKDPGTPVK--EPAPVAK 487
P+P G TL K +P + T P P+ G PV+ EP VA+
Sbjct: 320 PAPLPQGVFATLPSPKSASPPRHTLPRPEPIGGPVRGSEPKGVAR 364
>SB_44267| Best HMM Match : DUF602 (HMM E-Value=1.1e-29)
Length = 482
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 386 PTLSGNKEPAPVKETAPDPKDPGTPVKEPAPVAKE 490
P + K P+K+ P PK P+K+ P AK+
Sbjct: 175 PAVPAKKSEGPMKKDEPKPKKSKGPIKKDEPKAKK 209
Score = 27.9 bits (59), Expect = 4.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 404 KEPAPVKETAPDPKDPGTPVKEPAPVAKE 490
K P+K+ P PK P+K+ P AK+
Sbjct: 237 KSEGPIKKDEPKPKKSEGPIKKDEPKAKK 265
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = +2
Query: 356 PPSPALNGDSPTLSGNKEPAPVKETAPDPKDPGTPVKEPAPVAK 487
PP P G +P G P P P P P P P+ K
Sbjct: 954 PPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPPPPPPPPPPMRK 997
>SB_13248| Best HMM Match : SCP (HMM E-Value=2.6e-21)
Length = 631
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 356 PPSPALNGDSPTLSGNKEPAPVKETAPDPKDPGTPVKEP 472
PP P P G++EP PV + AP+P P T EP
Sbjct: 165 PPQPETVPPQP---GSEEPEPVSQ-APEPPKPKTSAPEP 199
Score = 27.1 bits (57), Expect = 8.5
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +2
Query: 356 PPSPALNGDSPTLSGNKEPAPVKETAPDPKDPG 454
PP P P + P P K +AP+P PG
Sbjct: 172 PPQPGSEEPEPVSQAPEPPKP-KTSAPEPPKPG 203
>SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2541
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 389 TLSGNKEPAPVKETAPDPKDPGTPVKEPAPVAKEP 493
TL PAP T+P G P++ P P+ + P
Sbjct: 533 TLETTPAPAPTTPTSPATPASGAPIRAPIPLKETP 567
>SB_40786| Best HMM Match : WSC (HMM E-Value=0.44)
Length = 230
Score = 29.9 bits (64), Expect = 1.2
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 410 PAPVKETAPDPKDPGTPVKEPAP 478
P P K +P P GTP ++P P
Sbjct: 137 PTPTKRPSPSPTGTGTPTRKPEP 159
>SB_6335| Best HMM Match : Fer2_BFD (HMM E-Value=1.7)
Length = 309
Score = 29.9 bits (64), Expect = 1.2
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2
Query: 472 WLFDGRSGVFGVRCGLFD 419
W+FD R G F VR G FD
Sbjct: 19 WVFDSREGAFRVRLGAFD 36
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +2
Query: 350 QTPPSPALNGDSPTLSGNKEPA--PVKETAPDPKDPGTPV 463
Q P L+ PT + P K TAP PK PG+PV
Sbjct: 470 QGPTDGVLSAKPPTKKTTPQSMIPPGKPTAPTPKPPGSPV 509
>SB_24885| Best HMM Match : HOOK (HMM E-Value=0.00023)
Length = 873
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +2
Query: 383 SPTLSGNKEPAPVKETAPDPKDPGTPVKEPAPVAKE 490
SP G PAP +T+P P +P + P + E
Sbjct: 599 SPASFGPSSPAPSNDTSPIPSGASSPAAQRIPASAE 634
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +2
Query: 410 PAPVKETAPDPKDPGTPVKEPAPVAKEP 493
P P P P+ P P EPAP ++P
Sbjct: 1049 PPPSAVPIPPPRKPSPPPSEPAPPPRQP 1076
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 359 PSPALNGDSPTLSGNKEPAPVKETAPDPKDPGTPVKEPAP 478
P P SP S P P ++ +P P +P P ++P P
Sbjct: 1040 PLPPPRKPSPPPSAVPIPPP-RKPSPPPSEPAPPPRQPPP 1078
>SB_18074| Best HMM Match : Trypan_PARP (HMM E-Value=0.081)
Length = 524
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +2
Query: 356 PPSPALNGDSPTLSGNKEPAPVKETAPDPKDPGTPVKEPAP 478
PP + P EP P +E P+P+ P EP P
Sbjct: 246 PPRQPVAEPEPERQPEPEPEPEQEPEPEPEPEPEPEPEPEP 286
>SB_50629| Best HMM Match : Extensin_2 (HMM E-Value=0.94)
Length = 450
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 402 IKSRLRSKRPHRTPKTPERPSKSQLRLPKNP 494
+ R RS P R P +P + S S R+P +P
Sbjct: 275 VSPRQRSNSPRRVPVSPRQRSNSPRRVPVSP 305
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 402 IKSRLRSKRPHRTPKTPERPSKSQLRLPKNP 494
+ R RS P R P +P + S S R+P +P
Sbjct: 289 VSPRQRSNSPRRVPVSPRQRSNSPRRVPVSP 319
>SB_48825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 357
Score = 28.7 bits (61), Expect = 2.8
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 423 KRPHRTPKTPERPSKSQLRLPKNP 494
K P TP TP P++S+ R P P
Sbjct: 298 KVPDNTPSTPSGPARSRSRTPSRP 321
>SB_51895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1368
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 350 QTPPSPALNGDSPTLSGNKEPAPVKETAPDPKDPGTPV 463
QT P+ GD+P L N +P P++ + P P V
Sbjct: 1027 QTLPTGPAMGDAPLLDANGDPPPLELISRRPLTPNVKV 1064
>SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1117
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 356 PPSPALNGDSPTLSGNKEPAPVKETAPDP 442
PP P L D PT S N +P P PDP
Sbjct: 75 PPPPRLYEDEPT-SPNVDPGPPTFKPPDP 102
>SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 28.3 bits (60), Expect = 3.7
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = -3
Query: 483 ATGAGSLTGVPGSLGSGAVSLTGAGSLFPESVGESPLSAGEGGVCT 346
AT +GSL GV GSG+V+L+ L ++ GE + AG+G T
Sbjct: 336 ATLSGSL-GVRNGNGSGSVALSMRRVLSYKAWGEVEVGAGDGPTLT 380
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 356 PPSPALNGDSPTLSGNKEPAPVKETAPDP 442
PP P L D PT S N +P P PDP
Sbjct: 1651 PPPPRLYEDEPT-SPNVDPGPPTFKPPDP 1678
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = +2
Query: 353 TPPSPALNGDSPTLSGNKEPAPVKET-APDPKDPGTPVKEPAP 478
+PP P N P NK P P T P P P T P P
Sbjct: 356 SPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPP 398
Score = 27.5 bits (58), Expect = 6.4
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = +2
Query: 356 PPSPALNGDSPTLSGNKEPAPVKET-APDPKDPGTPVKEPAP 478
PP P N SP N P P T P P P T P P
Sbjct: 347 PPPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPP 388
>SB_47005| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 27.9 bits (59), Expect = 4.9
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 410 PAPVKETAPDPKDPGTPVKEPAPVAKEP 493
PAP T+P G P++ P P+ + P
Sbjct: 36 PAPTTPTSPATPTSGPPIRTPIPLKETP 63
>SB_51630| Best HMM Match : Fz (HMM E-Value=3.3e-34)
Length = 1120
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 365 PALNGDSPTLSGNKEPAPVKETAPDPKDPGTPVKEPA 475
P L P +SG + + K T P P + T +K P+
Sbjct: 409 PTLTHSVPIISGRLKTSMNKRTKPKPGERATEIKSPS 445
>SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29)
Length = 1851
Score = 27.9 bits (59), Expect = 4.9
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 410 PAPVKETAPDPKDPGTPVKEPAPVAKEP 493
PAP T+P G P++ P P+ + P
Sbjct: 38 PAPTTPTSPATPASGAPIRTPIPLKETP 65
>SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1411
Score = 27.9 bits (59), Expect = 4.9
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 410 PAPVKETAPDPKDPGTPVKEPAPVAKEP 493
PAP T+P G P++ P P+ + P
Sbjct: 38 PAPTTPTSPATPASGAPIRTPIPLKETP 65
>SB_21461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +2
Query: 356 PPSPALNGDSPTLSGNKEPAPVKETAPDPKDPGTPVK-EPAP 478
PP+ A+ GD P + P P + P TP+ +P P
Sbjct: 14 PPNTAIPGDPPPNTTIPRAPPPNTAIPGDRPPNTPIPGDPPP 55
>SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1521
Score = 27.9 bits (59), Expect = 4.9
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 410 PAPVKETAPDPKDPGTPVKEPAPVAKEP 493
PAP T+P G P++ P P+ + P
Sbjct: 65 PAPTTPTSPATPASGVPIRAPIPLKETP 92
>SB_53945| Best HMM Match : POPLD (HMM E-Value=1)
Length = 465
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 410 PAPVKETAPDPKDPGTPVKEPAPVAKEP 493
PAP T+P G P++ P P+ + P
Sbjct: 36 PAPTTPTSPATPASGPPIRTPIPLKETP 63
>SB_45934| Best HMM Match : Gp-FAR-1 (HMM E-Value=2)
Length = 694
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 410 PAPVKETAPDPKDPGTPVKEPAPVAKEP 493
PAP T+P G P++ P P+ + P
Sbjct: 144 PAPTTPTSPATPASGPPIRTPIPLKETP 171
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 410 PAPVKETAPDPKDPGTPVKEPAPVAKEP 493
PAP T+P G P++ P P+ + P
Sbjct: 129 PAPTTPTSPATPASGPPIRTPIPLKETP 156
>SB_38792| Best HMM Match : 7tm_2 (HMM E-Value=2e-13)
Length = 1287
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +1
Query: 355 APLPRAQRRLPHALRE*RAGSGQRDRTGPQRPRNARQRASSGCQ 486
AP RLP E RDR+ RPR++R+ G Q
Sbjct: 1010 APNAGFSNRLPGTTNEQLPRRRPRDRSSSDRPRSSRRNREGGSQ 1053
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 27.5 bits (58), Expect = 6.4
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +2
Query: 350 QTPPSPAL-NGDSPTLSGNKE--PAPVKETAPDPKDPGTPVKEPAP 478
+TP PA N P S N PAP + P P +P P+ P P
Sbjct: 249 ETPLPPATPNPFIPPASPNPSIPPAPPNPSIPAPPNPSIPLAPPNP 294
Score = 27.1 bits (57), Expect = 8.5
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +2
Query: 356 PPSPALNGDSPTLSGNKEPAPVKETAPDPKDPGTPVKEPAPVA 484
PP P K PAP T P P P P P P A
Sbjct: 162 PPVTETTTTKPETKPPKPPAP--STIPTPPTPPAPPSPPIPTA 202
>SB_23088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 410 PAPVKETAPDPKDPGTPVKEPAPVAKEP 493
PAP T+P G P++ P P+ + P
Sbjct: 40 PAPTTPTSPATPASGPPIRTPIPLRETP 67
>SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6)
Length = 697
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 410 PAPVKETAPDPKDPGTPVKEPAPVAKEP 493
PAP T+P G P++ P P+ + P
Sbjct: 38 PAPTTPTSPATPASGPPIRTPIPLKETP 65
>SB_15551| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 134
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 429 PHRTPKTPERPSKSQLRLPKNP 494
P+ TP +P+R + S R PK+P
Sbjct: 101 PYPTPTSPQRATTSPYRAPKSP 122
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 432 HRTPKTPERPSKSQLRLPKNP 494
+RTP +P R S S R PK+P
Sbjct: 10 YRTPTSPYRTSTSPYRAPKSP 30
>SB_15319| Best HMM Match : Transposase_9 (HMM E-Value=3.2)
Length = 782
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 410 PAPVKETAPDPKDPGTPVKEPAPVAKEP 493
PAP T+P G P++ P P+ + P
Sbjct: 68 PAPTTPTSPATPASGPPIRTPIPLRETP 95
>SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 410 PAPVKETAPDPKDPGTPVKEPAPVAKEP 493
PAP T+P G P++ P P+ + P
Sbjct: 89 PAPTTPTSPATPASGPPIRTPIPLKETP 116
>SB_55443| Best HMM Match : Homeobox (HMM E-Value=2.3e-26)
Length = 245
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 416 PVKETAPDPKDPGTPVKEPAPVAKEP 493
P+ ++P P+ PG PV P V P
Sbjct: 199 PIFPSSPPPEYPGLPVSSPGRVCNRP 224
>SB_52277| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 429 PHRTPKTPERPSKSQLRLPKNP 494
P+ TP +P+R + S R PK+P
Sbjct: 75 PYPTPTSPQRATTSPYRAPKSP 96
>SB_42720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2391
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 410 PAPVKETAPDPKDPGTPVKEPAPVAKEP 493
PAP T+P G P++ P P+ + P
Sbjct: 98 PAPTTPTSPAAPASGPPIRTPIPLKETP 125
>SB_39566| Best HMM Match : Pyocin_S (HMM E-Value=3.3)
Length = 736
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 410 PAPVKETAPDPKDPGTPVKEPAPVAKEP 493
PAP T+P G P++ P P+ + P
Sbjct: 65 PAPTTPTSPATPASGPPIRTPIPLKETP 92
>SB_34508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 27.5 bits (58), Expect = 6.4
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 10/57 (17%)
Frame = +2
Query: 350 QTPPSPALNGDSPTL-SGNKEPAPVK-----ETAPDPKDPGTP----VKEPAPVAKE 490
Q P P + P + KEP PVK ET P+ K P V +P+P+ +E
Sbjct: 125 QEAPQPIKPAEKPPKPAAAKEPVPVKPEPKPETKPEAKQEAKPEAKQVTKPSPIVQE 181
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/46 (32%), Positives = 17/46 (36%), Gaps = 5/46 (10%)
Frame = +2
Query: 356 PPSPALNGDSPTLS-----GNKEPAPVKETAPDPKDPGTPVKEPAP 478
PP P +G +P G P P P P D G P P P
Sbjct: 292 PPPPPADGSAPAPPPPPPPGGAPPPPPPPPPPPPGDGGAPPPPPPP 337
>SB_33973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1184
Score = 27.5 bits (58), Expect = 6.4
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = -3
Query: 471 GSLTGVPGSLGSGAVSLTGAGSLFPESVGESPLSAGE 361
GSLT V G +GSG SL S GE PL++GE
Sbjct: 439 GSLTAVTGPVGSGKTSLLLTIS------GELPLASGE 469
>SB_24167| Best HMM Match : FF (HMM E-Value=9.2)
Length = 482
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 410 PAPVKETAPDPKDPGTPVKEPAPVAKEP 493
PAP T+P G P++ P P+ + P
Sbjct: 12 PAPTTPTSPATPASGPPIRTPIPLKETP 39
>SB_18429| Best HMM Match : FF (HMM E-Value=9.2)
Length = 456
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 410 PAPVKETAPDPKDPGTPVKEPAPVAKEP 493
PAP T+P G P++ P P+ + P
Sbjct: 12 PAPTTPTSPATPASGPPIRTPIPLKETP 39
>SB_14693| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 416 PVKETAPDPKDPGTPVKEPAPVAKEP 493
P+ ++P P+ PG PV P V P
Sbjct: 199 PIFPSSPPPEYPGLPVSSPGRVCNRP 224
>SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27)
Length = 522
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 410 PAPVKETAPDPKDPGTPVKEPAPVAKEP 493
PAP T+P G P++ P P+ + P
Sbjct: 430 PAPTTPTSPATPASGPPIRTPIPLKETP 457
>SB_42387| Best HMM Match : CH (HMM E-Value=2.7)
Length = 703
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 410 PAPVKETAPDPKDPGTPVKEPAPVAKEP 493
PAP T+P G P++ P P+ + P
Sbjct: 198 PAPTTPTSPVTPASGPPIRTPIPLKETP 225
>SB_16428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1005
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +2
Query: 386 PTLSGNKEPAPVKETAPDPKDPGTPVKEPA 475
PT G + P P+ + P PGT PA
Sbjct: 168 PTTPGMRPPEPINDAPHIPSRPGTTTIRPA 197
>SB_18393| Best HMM Match : RCSD (HMM E-Value=2.6)
Length = 249
Score = 27.1 bits (57), Expect = 8.5
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 405 KSRLRS-KRPHRTPKTPERPSKSQLRLPKNP 494
K+RLR K P R KTP R K+ LR K P
Sbjct: 113 KTRLRQHKTPLRQHKTPLRQHKTPLRQYKTP 143
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,887,207
Number of Sequences: 59808
Number of extensions: 209857
Number of successful extensions: 1529
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 1149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1459
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1062812967
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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