Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20232
         (545 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC110894-1|AAI10895.1|  554|Homo sapiens DnaJ (Hsp40) homolog, s...    29   8.0  
AY225122-1|AAP50497.1|  554|Homo sapiens MTJ1-like protein protein.    29   8.0  
AL445431-3|CAI13668.1|  554|Homo sapiens DnaJ (Hsp40) homolog, s...    29   8.0  
AL359697-3|CAH73412.1|  554|Homo sapiens DnaJ (Hsp40) homolog, s...    29   8.0  
AK027263-1|BAB55004.1|  554|Homo sapiens protein ( Homo sapiens ...    29   8.0  
AK026062-1|BAB15343.1|  340|Homo sapiens protein ( Homo sapiens ...    29   8.0  

>BC110894-1|AAI10895.1|  554|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily C, member 1 protein.
          Length = 554

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 22/70 (31%), Positives = 37/70 (52%)
 Frame = +3

Query: 87  TLKELSHAFNEIIQFFAKIFDTIYKGTEPIVESIINTYVETVKKIAELYEKQLEPQ*DSY 266
           TLK L H   +  QF+AK  +T  K  E   +++  T +ET++K  ++  K+ +P+   Y
Sbjct: 234 TLKALPHLIQDAGQFYAKYKETRLKEKE---DALTRTELETLQKQKKV--KKPKPEFPVY 288

Query: 267 TKPWRPYSRS 296
           T     Y +S
Sbjct: 289 TPLETTYIQS 298


>AY225122-1|AAP50497.1|  554|Homo sapiens MTJ1-like protein protein.
          Length = 554

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 22/70 (31%), Positives = 37/70 (52%)
 Frame = +3

Query: 87  TLKELSHAFNEIIQFFAKIFDTIYKGTEPIVESIINTYVETVKKIAELYEKQLEPQ*DSY 266
           TLK L H   +  QF+AK  +T  K  E   +++  T +ET++K  ++  K+ +P+   Y
Sbjct: 234 TLKALPHLIQDAGQFYAKYKETRLKEKE---DALTRTELETLQKQKKV--KKPKPEFPVY 288

Query: 267 TKPWRPYSRS 296
           T     Y +S
Sbjct: 289 TPLETTYIQS 298


>AL445431-3|CAI13668.1|  554|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily C, member 1 protein.
          Length = 554

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 22/70 (31%), Positives = 37/70 (52%)
 Frame = +3

Query: 87  TLKELSHAFNEIIQFFAKIFDTIYKGTEPIVESIINTYVETVKKIAELYEKQLEPQ*DSY 266
           TLK L H   +  QF+AK  +T  K  E   +++  T +ET++K  ++  K+ +P+   Y
Sbjct: 234 TLKALPHLIQDAGQFYAKYKETRLKEKE---DALTRTELETLQKQKKV--KKPKPEFPVY 288

Query: 267 TKPWRPYSRS 296
           T     Y +S
Sbjct: 289 TPLETTYIQS 298


>AL359697-3|CAH73412.1|  554|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily C, member 1 protein.
          Length = 554

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 22/70 (31%), Positives = 37/70 (52%)
 Frame = +3

Query: 87  TLKELSHAFNEIIQFFAKIFDTIYKGTEPIVESIINTYVETVKKIAELYEKQLEPQ*DSY 266
           TLK L H   +  QF+AK  +T  K  E   +++  T +ET++K  ++  K+ +P+   Y
Sbjct: 234 TLKALPHLIQDAGQFYAKYKETRLKEKE---DALTRTELETLQKQKKV--KKPKPEFPVY 288

Query: 267 TKPWRPYSRS 296
           T     Y +S
Sbjct: 289 TPLETTYIQS 298


>AK027263-1|BAB55004.1|  554|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14357 fis, clone HEMBA1000005, highly similar to
           DNAJ PROTEIN HOMOLOG MTJ1. ).
          Length = 554

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 22/70 (31%), Positives = 37/70 (52%)
 Frame = +3

Query: 87  TLKELSHAFNEIIQFFAKIFDTIYKGTEPIVESIINTYVETVKKIAELYEKQLEPQ*DSY 266
           TLK L H   +  QF+AK  +T  K  E   +++  T +ET++K  ++  K+ +P+   Y
Sbjct: 234 TLKALPHLIQDAGQFYAKYKETRLKEKE---DALTRTELETLQKQKKV--KKPKPEFPVY 288

Query: 267 TKPWRPYSRS 296
           T     Y +S
Sbjct: 289 TPLETTYIQS 298


>AK026062-1|BAB15343.1|  340|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22409 fis, clone HRC08419. ).
          Length = 340

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 22/70 (31%), Positives = 37/70 (52%)
 Frame = +3

Query: 87  TLKELSHAFNEIIQFFAKIFDTIYKGTEPIVESIINTYVETVKKIAELYEKQLEPQ*DSY 266
           TLK L H   +  QF+AK  +T  K  E   +++  T +ET++K  ++  K+ +P+   Y
Sbjct: 20  TLKALPHLIQDAGQFYAKYKETRLKEKE---DALTRTELETLQKQKKV--KKPKPEFPVY 74

Query: 267 TKPWRPYSRS 296
           T     Y +S
Sbjct: 75  TPLETTYIQS 84


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,191,204
Number of Sequences: 237096
Number of extensions: 1388916
Number of successful extensions: 3482
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3482
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5364536570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)