Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20232
         (545 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              24   0.88 
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   3.5  

>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 24.2 bits (50), Expect = 0.88
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 138 KIFDTIYKGTEPIVESIINTYVETVKK 218
           KI D +Y G   + +  + +YVE + K
Sbjct: 42  KIIDEVYNGNVNVEDENVQSYVECMMK 68


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +3

Query: 12  PYFKKIDEDFRREWSKFYQEVTDDKTLKELSHAFN-EIIQFFAKIFDTI 155
           PYF   D +FR + +   +++T+D   + LS+  +   +QF  K  D I
Sbjct: 222 PYFLFGDFNFRTDTAGVIKKLTEDTQERRLSNKGSISKLQFHNKDDDLI 270


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,364
Number of Sequences: 438
Number of extensions: 2627
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15581757
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)