Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20231
(658 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 229 2e-60
SB_56| Best HMM Match : Actin (HMM E-Value=0) 229 2e-60
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 229 2e-60
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 228 4e-60
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 205 3e-53
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 140 7e-34
SB_54| Best HMM Match : Actin (HMM E-Value=0) 138 4e-33
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 137 6e-33
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 124 5e-29
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 100 1e-21
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 93 2e-19
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 58 6e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 3e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 37 0.013
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 36 0.029
SB_35006| Best HMM Match : PT (HMM E-Value=3.4) 35 0.067
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 33 0.27
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.62
SB_15263| Best HMM Match : Jun (HMM E-Value=1.8) 31 0.83
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 31 0.83
SB_14859| Best HMM Match : SEA (HMM E-Value=0.01) 31 1.1
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 31 1.1
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 30 1.4
SB_7573| Best HMM Match : Nucleoporin (HMM E-Value=0.21) 30 1.4
SB_56329| Best HMM Match : DUF112 (HMM E-Value=4.3) 30 1.9
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_5696| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05) 29 2.5
SB_19383| Best HMM Match : Rpr2 (HMM E-Value=0.74) 29 3.3
SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23) 29 4.4
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 29 4.4
SB_33399| Best HMM Match : Ank (HMM E-Value=0) 29 4.4
SB_27892| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_25842| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_40626| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_20050| Best HMM Match : RVT_1 (HMM E-Value=1.3e-07) 28 7.7
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 229 bits (559), Expect = 2e-60
Identities = 105/113 (92%), Positives = 108/113 (95%)
Frame = +3
Query: 255 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 434
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 67 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 126
Query: 435 FNTPAMYVAIQAVLSLYASGPYHRYVLDSGDGVSHTVPIYEGYALPHAILRLD 593
FN+PAMYVAIQAVLSLYASG V+DSGDGV+HTVPIYEGYALPHAILRLD
Sbjct: 127 FNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 179
Score = 136 bits (329), Expect = 1e-32
Identities = 63/69 (91%), Positives = 66/69 (95%)
Frame = +1
Query: 61 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 240
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 241 RGILTSNTP 267
RGILT P
Sbjct: 62 RGILTLKYP 70
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2
Query: 602 GRDLTDYLMKILTERGY 652
GRDLTDYLMKILTERGY
Sbjct: 182 GRDLTDYLMKILTERGY 198
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 229 bits (559), Expect = 2e-60
Identities = 105/113 (92%), Positives = 108/113 (95%)
Frame = +3
Query: 255 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 434
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 67 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 126
Query: 435 FNTPAMYVAIQAVLSLYASGPYHRYVLDSGDGVSHTVPIYEGYALPHAILRLD 593
FN+PAMYVAIQAVLSLYASG V+DSGDGV+HTVPIYEGYALPHAILRLD
Sbjct: 127 FNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 179
Score = 137 bits (332), Expect = 6e-33
Identities = 64/69 (92%), Positives = 66/69 (95%)
Frame = +1
Query: 61 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 240
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 241 RGILTSNTP 267
RGILT P
Sbjct: 62 RGILTLKYP 70
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2
Query: 602 GRDLTDYLMKILTERGY 652
GRDLTDYLMKILTERGY
Sbjct: 182 GRDLTDYLMKILTERGY 198
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 229 bits (559), Expect = 2e-60
Identities = 105/113 (92%), Positives = 108/113 (95%)
Frame = +3
Query: 255 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 434
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 435 FNTPAMYVAIQAVLSLYASGPYHRYVLDSGDGVSHTVPIYEGYALPHAILRLD 593
FN+PAMYVAIQAVLSLYASG V+DSGDGV+HTVPIYEGYALPHAILRLD
Sbjct: 128 FNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 180
Score = 143 bits (347), Expect = 1e-34
Identities = 66/71 (92%), Positives = 68/71 (95%)
Frame = +1
Query: 55 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 234
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 235 SKRGILTSNTP 267
SKRGILT P
Sbjct: 61 SKRGILTLKYP 71
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2
Query: 602 GRDLTDYLMKILTERGY 652
GRDLTDYLMKILTERGY
Sbjct: 183 GRDLTDYLMKILTERGY 199
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 228 bits (557), Expect = 4e-60
Identities = 104/113 (92%), Positives = 108/113 (95%)
Frame = +3
Query: 255 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 434
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 435 FNTPAMYVAIQAVLSLYASGPYHRYVLDSGDGVSHTVPIYEGYALPHAILRLD 593
FN+PAMYVAIQAVLSLYASG V+DSGDGV+HTVPIYEGYALPHAI+RLD
Sbjct: 128 FNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLD 180
Score = 139 bits (336), Expect = 2e-33
Identities = 65/71 (91%), Positives = 67/71 (94%)
Frame = +1
Query: 55 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 234
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 235 SKRGILTSNTP 267
SKRGILT P
Sbjct: 61 SKRGILTLKYP 71
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2
Query: 602 GRDLTDYLMKILTERGY 652
GRDLTDYLMKILTERGY
Sbjct: 183 GRDLTDYLMKILTERGY 199
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 205 bits (500), Expect = 3e-53
Identities = 96/106 (90%), Positives = 99/106 (93%), Gaps = 2/106 (1%)
Frame = +3
Query: 255 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 434
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 435 FNTPAMYVAIQAVLSLYASGPYHRYVLDSGDGVSHTVPIYE--GYA 566
FN+PAMYVAIQAVLSLYASG V+DSGDGVSHTVPIYE GY+
Sbjct: 128 FNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
Score = 139 bits (336), Expect = 2e-33
Identities = 63/71 (88%), Positives = 67/71 (94%)
Frame = +1
Query: 55 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 234
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 235 SKRGILTSNTP 267
SKRGILT P
Sbjct: 61 SKRGILTLKYP 71
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 140 bits (340), Expect = 7e-34
Identities = 64/121 (52%), Positives = 86/121 (71%), Gaps = 2/121 (1%)
Frame = +3
Query: 237 QKRYP-DLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREK 410
Q RY ++ YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREK
Sbjct: 63 QLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREK 122
Query: 411 MTQIMFETFNTPAMYVAIQAVLSLYASGPYHRYVLDSGDGVSHTVPIYEGYALPHAILRL 590
M ++MFE + +Y+AIQAVL+LYA G V+DSGDGV+H P+YEG+ALPH RL
Sbjct: 123 MIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRL 182
Query: 591 D 593
D
Sbjct: 183 D 183
Score = 55.2 bits (127), Expect = 4e-08
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = +1
Query: 73 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 246
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 247 ILTSNTP 267
+L N P
Sbjct: 67 MLEVNYP 73
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 138 bits (334), Expect = 4e-33
Identities = 63/96 (65%), Positives = 76/96 (79%)
Frame = +3
Query: 306 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 485
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 486 ASGPYHRYVLDSGDGVSHTVPIYEGYALPHAILRLD 593
ASG V D GDGVSHTVP+Y+GY LPHA R+D
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRID 2224
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 79 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 180
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
Score = 31.9 bits (69), Expect = 0.47
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +2
Query: 602 GRDLTDYLMKILTERGY 652
GRDLT YL +++TERGY
Sbjct: 2227 GRDLTHYLQRLVTERGY 2243
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 137 bits (332), Expect = 6e-33
Identities = 63/69 (91%), Positives = 66/69 (95%)
Frame = +1
Query: 61 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 240
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 241 RGILTSNTP 267
RGILT P
Sbjct: 62 RGILTLKYP 70
Score = 108 bits (259), Expect = 4e-24
Identities = 51/65 (78%), Positives = 57/65 (87%)
Frame = +3
Query: 399 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGPYHRYVLDSGDGVSHTVPIYEGYALPHA 578
N + M +IMFETFN+PAMYVAIQAVLSLYASG V+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 579 ILRLD 593
I+RLD
Sbjct: 138 IIRLD 142
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +3
Query: 255 LKYPIEHGIVTNWDDMEKIWHHTF 326
LKYPIEHGIVTNWDDMEKI TF
Sbjct: 67 LKYPIEHGIVTNWDDMEKIMFETF 90
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2
Query: 602 GRDLTDYLMKILTERGY 652
GRDLTDYLMKILTERGY
Sbjct: 145 GRDLTDYLMKILTERGY 161
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 124 bits (300), Expect = 5e-29
Identities = 53/80 (66%), Positives = 69/80 (86%)
Frame = +3
Query: 354 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGPYHRYVLDSGDGV 533
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+G VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 534 SHTVPIYEGYALPHAILRLD 593
SH+VPIYEG+A+PH+I+R D
Sbjct: 186 SHSVPIYEGFAMPHSIMRTD 205
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 100 bits (239), Expect = 1e-21
Identities = 48/58 (82%), Positives = 50/58 (86%)
Frame = +3
Query: 420 IMFETFNTPAMYVAIQAVLSLYASGPYHRYVLDSGDGVSHTVPIYEGYALPHAILRLD 593
IMFE FN+PA+YVAIQAVLSLYASG V DSGDGVSH VPIYEGYALPHAILRLD
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLD 58
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +2
Query: 602 GRDLTDYLMKILTERGY 652
GRDLTDYLMK++TERGY
Sbjct: 61 GRDLTDYLMKLMTERGY 77
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 92.7 bits (220), Expect = 2e-19
Identities = 40/108 (37%), Positives = 69/108 (63%)
Frame = +3
Query: 264 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 443
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 444 PAMYVAIQAVLSLYASGPYHRYVLDSGDGVSHTVPIYEGYALPHAILR 587
PA ++ +VL+ +A+G + V+DSG + VP+++GY L AI+R
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVR 110
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 64 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 180
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 58.0 bits (134), Expect = 6e-09
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Frame = +1
Query: 43 Y*FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-S 213
Y FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 691 YSFKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYK 750
Query: 214 YVGDEAQSKRGILTSN 261
GD A +K G++ N
Sbjct: 751 KYGDAAVAKSGVMHLN 766
Score = 35.5 bits (78), Expect = 0.038
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = +3
Query: 465 QAVLSLYASGPYHRYVLDSGDGVSHTVPIYEGYALPHAILRLDFG 599
Q LSLYASG L SG + IYEG+ L H + L+ G
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIG 811
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +3
Query: 258 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 371
K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 28.3 bits (60), Expect = 5.8
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +3
Query: 510 VLDSGDGVSHTVPI 551
V+DSGDGV+H +P+
Sbjct: 359 VIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 44.4 bits (100), Expect = 8e-05
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = -2
Query: 177 MAGPSDDRGEYGARSIISCETGLAHTGAIVYYQRGNFLV 61
MA +DD GE G+ SI+S ETGLAHTGAI+ Q + +V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +1
Query: 436 STRPPCTSPSKPCSRCTRPVRTTGTCWTPATVSPTPYPSTRDTHSLT-PSCVWTLARSRP 612
ST P T+P+ T P +TT T TP +PTP T T +LT P+ T ++P
Sbjct: 46 STAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKP 105
Query: 613 HRLPH 627
H
Sbjct: 106 TPTAH 110
Score = 31.9 bits (69), Expect = 0.47
Identities = 21/62 (33%), Positives = 27/62 (43%)
Frame = +1
Query: 439 TRPPCTSPSKPCSRCTRPVRTTGTCWTPATVSPTPYPSTRDTHSLTPSCVWTLARSRPHR 618
T P T+P++ T P T T TP +PTP T T + T S TL + P
Sbjct: 42 TTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTS---TLTKPTPAT 98
Query: 619 LP 624
P
Sbjct: 99 TP 100
Score = 29.9 bits (64), Expect = 1.9
Identities = 26/101 (25%), Positives = 38/101 (37%), Gaps = 3/101 (2%)
Frame = +1
Query: 253 TSNTPSNTESSLTGMTWRRFGIIPSTMSSVSPPRNIPSFSXXXXXXXXXXXXXXXXXCSK 432
T TP+ T S T T T ++ +P P+ S +
Sbjct: 50 TQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTA 109
Query: 433 HS-TRPPCTS--PSKPCSRCTRPVRTTGTCWTPATVSPTPY 546
H+ T P T+ P+KP + P T T TP T +PT +
Sbjct: 110 HTPTTPTPTAHTPTKPTPKTPTPTTPTPTAHTPTTPTPTTF 150
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +1
Query: 439 TRPPCTSPSKPCSRCTRPVRTTGTCWTPATVSPTP-YPSTRDTHSLTPS 582
T P T P+ T+P TT T P +PTP PS TP+
Sbjct: 22 TTPTPTKPTPTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPT 70
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 37.1 bits (82), Expect = 0.013
Identities = 35/126 (27%), Positives = 52/126 (41%), Gaps = 8/126 (6%)
Frame = +3
Query: 234 EQKRYPDLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 407
E K Y L Y P + G + NWD ++IW +TF E +
Sbjct: 280 ECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE--------------------GLED 319
Query: 408 KMTQIMFETFNTPAMYVAIQAVLSLY------ASGPYHRYVLDSGDGVSHTVPIYEGYAL 569
M +I+FE +N A+ A LS Y S V+D+G +H VP++ G +
Sbjct: 320 AMDEILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKVI 379
Query: 570 PHAILR 587
A+ R
Sbjct: 380 KKAVRR 385
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 67 EVAALVVDNGSGMCKAGFAGDDAPRAV 147
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 35.9 bits (79), Expect = 0.029
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +3
Query: 510 VLDSGDGVSHTVPIYEGYALPHAI 581
V+DSGDGV+H +P+ EGY + I
Sbjct: 65 VIDSGDGVTHVIPVAEGYVIGSCI 88
>SB_35006| Best HMM Match : PT (HMM E-Value=3.4)
Length = 325
Score = 34.7 bits (76), Expect = 0.067
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = -3
Query: 272 FDGVFEVRIPLLLCASSPTYESFCPMPTITP*WRGLPT 159
+DGV ++++ LLL +SSP + S P+ TP +GL T
Sbjct: 273 YDGVIDIKLNLLLLSSSPMFLSAVPIAPHTPTLQGLHT 310
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 33.1 bits (72), Expect = 0.20
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -1
Query: 568 SAYPS*MGTVWETPSPESSTYRWYGPDAYSESTAW 464
S +P T W +PSP+ T W P ++T+W
Sbjct: 68 STFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSW 102
Score = 31.1 bits (67), Expect = 0.83
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -1
Query: 544 TVWETPSPESSTYRWYGPDAYSESTAWMATYMAGVLNVSNMIWVIFSLLALGLR 383
T W +PSP+ T W P ++T+W + +S++ +I L + R
Sbjct: 112 TSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSLYHIIGRLSGVHYR 165
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -1
Query: 568 SAYPS*MGTVWETPSPESSTYRWYGPDAYSESTAW 464
S P T W +PSP+ T W P ++T+W
Sbjct: 80 SPSPQYKTTSWTSPSPQYKTTSWSLPLPQHKTTSW 114
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = -1
Query: 568 SAYPS*MGTVWETPSPESSTYRWYGPDAYSESTAW 464
S P T W P P+ T W P ++T+W
Sbjct: 92 SPSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSW 126
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 32.7 bits (71), Expect = 0.27
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 433 HSTRPPCTSPSKPCSRCTRPVRTT-GTCWTPATVSPTPYPSTRDTHSLTPS 582
HST ++PS P + CT +T T TP+T S PST T S TPS
Sbjct: 63 HSTPSAPSTPSTPSTPCTPSTPSTPSTPSTPSTPSTPSAPSTPSTPS-TPS 112
Score = 30.7 bits (66), Expect = 1.1
Identities = 34/110 (30%), Positives = 47/110 (42%)
Frame = +1
Query: 253 TSNTPSNTESSLTGMTWRRFGIIPSTMSSVSPPRNIPSFSXXXXXXXXXXXXXXXXXCSK 432
T +TPS T S+ + ++ +P+T S+ S P + PS S
Sbjct: 200 TPSTPS-TPSTPSTLSMPSTPSMPNTPSTPSTP-STPSTLSTPITPSTPSTPSTPSTPSM 257
Query: 433 HSTRPPCTSPSKPCSRCTRPVRTTGTCWTPATVSPTPYPSTRDTHSLTPS 582
ST ++PS P + CT T T TP+ S PST T S TPS
Sbjct: 258 PSTPSTPSTPSTPSTPCT--PNTPSTPSTPSMPSTPSTPSTPSTPS-TPS 304
Score = 30.7 bits (66), Expect = 1.1
Identities = 34/110 (30%), Positives = 47/110 (42%)
Frame = +1
Query: 253 TSNTPSNTESSLTGMTWRRFGIIPSTMSSVSPPRNIPSFSXXXXXXXXXXXXXXXXXCSK 432
T +TPS T S+ + ++ +P+T S+ S P + PS S
Sbjct: 750 TPSTPS-TPSTPSTLSMPSTPSMPNTPSTPSTP-STPSTLSTPITPSTPSTPSTPSTPSM 807
Query: 433 HSTRPPCTSPSKPCSRCTRPVRTTGTCWTPATVSPTPYPSTRDTHSLTPS 582
ST ++PS P + CT T T TP+ S PST T S TPS
Sbjct: 808 PSTPSTPSTPSTPSTPCT--PNTPSTPSTPSMPSTPSTPSTPSTPS-TPS 854
Score = 30.3 bits (65), Expect = 1.4
Identities = 36/114 (31%), Positives = 46/114 (40%), Gaps = 4/114 (3%)
Frame = +1
Query: 253 TSNTPSNTESSLTGMTWRRFGIIPSTMSSVSPPRNIPSFSXXXXXXXXXXXXXXXXXCSK 432
T +TPS + T T PST S+ S P + PS S
Sbjct: 92 TPSTPSTPSAPSTPST-PSTPSTPSTPSTPSTP-STPSAPSTPSTPSTPSTPSTPSTPST 149
Query: 433 HSTRPPCTSPSKPCSRCTRPVRTT----GTCWTPATVSPTPYPSTRDTHSLTPS 582
ST ++PS P + T +T GT TP+T+S PST T S TPS
Sbjct: 150 PSTPSTPSTPSTPITPGTPSTPSTPSAPGTPITPSTLSTPSTPSTPSTRS-TPS 202
Score = 29.9 bits (64), Expect = 1.9
Identities = 37/110 (33%), Positives = 45/110 (40%)
Frame = +1
Query: 253 TSNTPSNTESSLTGMTWRRFGIIPSTMSSVSPPRNIPSFSXXXXXXXXXXXXXXXXXCSK 432
T +TPS + T T PST S+ S P + PS S
Sbjct: 433 TPSTPSTPSTPSTPST-PSLTHTPSTPSTPSTP-STPSTPSTPSTPSTPSTPSTPSTPST 490
Query: 433 HSTRPPCTSPSKPCSRCTRPVRTTGTCWTPATVSPTPYPSTRDTHSLTPS 582
ST ++PS P S + P T GT TP+T S PST T S TPS
Sbjct: 491 PSTSSTPSTPSTP-STPSAP-GTPGTPSTPSTPSAPGTPSTPSTPS-TPS 537
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +1
Query: 430 KHSTRPPCTSPSKPCSRCTRPVRTT-GTCWTPATVSPTPYPSTRDTHS--LTPS 582
K+ R ++PS PC+ T +T T TP+T S PST T S +TPS
Sbjct: 2 KNPHRLKLSTPSTPCTPSTPSTPSTPSTPRTPSTPSTPCTPSTPSTPSTPITPS 55
Score = 28.7 bits (61), Expect = 4.4
Identities = 37/114 (32%), Positives = 46/114 (40%), Gaps = 4/114 (3%)
Frame = +1
Query: 253 TSNTPSNTESSLTGMTWRRFGIIPSTMSSVSPPRNIPSFSXXXXXXXXXXXXXXXXXCSK 432
T +TPS T + T T PST S+ S P + PS S
Sbjct: 445 TPSTPSLTHTPSTPST-------PSTPSTPSTP-STPSTPSTPSTPSTPSTPSTPSTSST 496
Query: 433 HSTRPPCTSPSKPCSRCTRPVRTT----GTCWTPATVSPTPYPSTRDTHSLTPS 582
ST ++PS P + T +T GT TP+T S PST T S TPS
Sbjct: 497 PSTPSTPSTPSAPGTPGTPSTPSTPSAPGTPSTPSTPSTPSTPSTPSTPS-TPS 549
Score = 28.7 bits (61), Expect = 4.4
Identities = 35/117 (29%), Positives = 47/117 (40%), Gaps = 7/117 (5%)
Frame = +1
Query: 253 TSNTPSNTESSLTGMTWRRFGIIPSTMSSVSPPRNIPSFSXXXXXXXXXXXXXXXXXCSK 432
T +TPS + T T PST S+ S P + PS + S
Sbjct: 639 TPSTPSTPSTRSTPST-PSTPSTPSTPSTPSTP-STPSLTHTPSTPSTPSTPSTPSTPSM 696
Query: 433 HSTRPPCTSPSKPCSRCTRPVRTT-------GTCWTPATVSPTPYPSTRDTHSLTPS 582
+T ++PS P + T +T GT TP+T+S PST T S TPS
Sbjct: 697 PNTPSTPSTPSTPSTPITPGTPSTPSTPSAPGTPITPSTLSTPSTPSTPSTRS-TPS 752
Score = 28.3 bits (60), Expect = 5.8
Identities = 22/46 (47%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 448 PCTSPSKPCSRCTRPV-RTTGTCWTPATVSPTPYPSTRDTHSLTPS 582
PCT PS P + T RT T TP T S PST T S TPS
Sbjct: 15 PCT-PSTPSTPSTPSTPRTPSTPSTPCTPSTPSTPSTPITPS-TPS 58
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +1
Query: 454 TSPSKPCSRCTRPVRTTGTCWTPATVSPTPYPSTRDTHSLT 576
++PS P + TR +T + TP+T S PST T SLT
Sbjct: 638 STPSTPSTPSTRSTPSTPS--TPSTPSTPSTPSTPSTPSLT 676
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 32.7 bits (71), Expect = 0.27
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = +1
Query: 433 HSTRPPCTSPSKPCSRCTRPVRTTGTCWTPATVSP-TPYPSTRDTHSLTP 579
H+T+PP T P T+P T P T P T P T H+ P
Sbjct: 137 HTTKPPTTKPQTTKPHTTKPRTTKPPTTKPHTTKPHTTKPHTTKPHTTKP 186
Score = 31.9 bits (69), Expect = 0.47
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Frame = +1
Query: 433 HSTRPPCTSPSKPCSRCTRPVRTTGTCWTP--ATVSPTPYPSTRDTHSLTPSCVWTLARS 606
H+ +P T P R T+P TT C T T PT P T H+ P +
Sbjct: 107 HTNKPYTTKPRTTKPRTTKP-HTTKPCTTKPHTTKPPTTKPQTTKPHTTKPRTT-KPPTT 164
Query: 607 RPHRL-PH-EDPHRAR 648
+PH PH PH +
Sbjct: 165 KPHTTKPHTTKPHTTK 180
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/66 (27%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Frame = +1
Query: 433 HSTRPPCTSPSKPCSRCTRPVRTTGTCWTPATVSP-TPYPSTRDTHSLTPSCVWTLARSR 609
H+T+P T P T+P T P T P T P T H+ P +
Sbjct: 42 HTTKPHTTKPHTIKPHTTKPHTTKPHTTKPHTTKPRTTKPQTTKPHTTKPHTIKLYTTKP 101
Query: 610 PHRLPH 627
PH
Sbjct: 102 KTTKPH 107
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.62
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 255 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 407
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.62
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 152 GNTARGASSPAKPALHIPEPLSTT 81
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.62
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 152 GNTARGASSPAKPALHIPEPLSTT 81
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_15263| Best HMM Match : Jun (HMM E-Value=1.8)
Length = 315
Score = 31.1 bits (67), Expect = 0.83
Identities = 20/68 (29%), Positives = 27/68 (39%)
Frame = +1
Query: 445 PPCTSPSKPCSRCTRPVRTTGTCWTPATVSPTPYPSTRDTHSLTPSCVWTLARSRPHRLP 624
PPC P + T TT T AT P P+T +L P R++P +
Sbjct: 113 PPCYIPCPTATATTSTTATTPAKTTSATTKPVMTPTTPAPMTLPPISPIDPPRTQPPPIF 172
Query: 625 HEDPHRAR 648
DP R +
Sbjct: 173 PIDPPRTQ 180
Score = 27.9 bits (59), Expect = 7.7
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +1
Query: 436 STRPPCTSPSKPCSRCTRPVRTTGTCWTPATVSPTPYPSTRDTHSLTPSCVWTL--ARSR 609
+T T+P+K S T+PV T T P T+ P S D P ++ + R++
Sbjct: 125 TTSTTATTPAKTTSATTKPVMTP-TTPAPMTLPPI---SPIDPPRTQPPPIFPIDPPRTQ 180
Query: 610 PHRLPHEDPHRAR 648
P +P DP R +
Sbjct: 181 PPPIPPIDPPRTQ 193
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 31.1 bits (67), Expect = 0.83
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +1
Query: 433 HSTRPPCTSPSKPCSRCTRPVRTTGTCWT----PATVSPTPYPSTRDTHSLTPS 582
++T P T+P+KP + T P TT T T PAT +PT +T + TP+
Sbjct: 66 NTTPPATTTPTKPTTT-TPPATTTPTTPTTTTPPATTTPTKPTTTTPPATTTPT 118
Score = 31.1 bits (67), Expect = 0.83
Identities = 31/115 (26%), Positives = 44/115 (38%), Gaps = 5/115 (4%)
Frame = +1
Query: 253 TSNTPSNTESSLTGMTWRRFGIIPSTMSSVSPPRNIPSFSXXXXXXXXXXXXXXXXXCSK 432
T+ TP T + T T P+T + P P +
Sbjct: 79 TTTTPPATTTPTTPTTTTP----PATTTPTKPTTTTPPATTTPTKPTTTTPPGTTTPTKP 134
Query: 433 HSTRPPCTS-PSKPCSRCTRPVRTTGTCWT----PATVSPTPYPSTRDTHSLTPS 582
+T PP T+ P+KP + T P TT T T PAT +PT +T + TP+
Sbjct: 135 TTTTPPATTTPTKPTTT-TPPATTTPTKPTTTTPPATTTPTKSTTTTPPATTTPT 188
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 433 HSTRPPCT-SPSKPCSRCTRPVRTTGTCWTPATVSPTPYPSTRDTHSLTPS 582
H RPP S P +R T P T T PAT +PT +T + TP+
Sbjct: 27 HHQRPPLLPSQQLPHNRTTTPTTPTTTT-PPATTTPTKPTNTTPPATTTPT 76
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Frame = +1
Query: 436 STRPPC-TSPSKPCSRCTRPVRTTGTCWT----PATVSPTPYPSTRDTHSLTPS 582
+T PP T+P+KP + T P TT T T PAT +PT +T + TP+
Sbjct: 52 TTTPPATTTPTKP-TNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 436 STRPPC-TSPSKPCSRCTRPVRTTGTCWTPATVSPTPYPSTR 558
+T PP T+P+KP + T P TT T T T T P+TR
Sbjct: 150 TTTPPATTTPTKP-TTTTPPATTTPTKSTTTTPPATTTPTTR 190
>SB_14859| Best HMM Match : SEA (HMM E-Value=0.01)
Length = 1776
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +1
Query: 436 STRPPCTSPSKPCSRCTRPVRTTGTCWTPATVSP-TPYPSTRDTHSLTP 579
+T P T+P T P TT TP T +P T P T + TP
Sbjct: 163 TTTPETTAPRTTTPETTTPETTTPRTTTPVTTTPRTTTPETTTPETTTP 211
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/59 (33%), Positives = 23/59 (38%)
Frame = +1
Query: 436 STRPPCTSPSKPCSRCTRPVRTTGTCWTPATVSPTPYPSTRDTHSLTPSCVWTLARSRP 612
+T P T+P R T P TT T A P P T T S PS +RP
Sbjct: 198 TTTPETTTPETTTPRTTTPETTTPKKTTAA--KKAPLPVTHATTSHAPSTTENPTTARP 254
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +1
Query: 454 TSPSKPCSRCTRPVRTTGTCWTPATVSPTP--YPSTRDTHSLTPSCVWTLARS 606
T +KPC T +T C+TP T+SP P Y ++ + + +W LA S
Sbjct: 707 TLSTKPCF--TPLTLSTKLCFTPLTLSPKPNAYYASFERSCTNKNIIWDLAES 757
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +1
Query: 448 PCTSPSKPCSRCTRPVR----TTGTCWTPATVSPTPYPSTRDTHSLTPSCVWTLARSRPH 615
P T+P KP S T P++ TT +P+T P PST T + PS T + P
Sbjct: 1301 PSTTPIKP-SPSTTPIKPSPSTTPIKPSPSTTPIKPSPSTTSTTPIKPSPSTTPIKPSPS 1359
Query: 616 RLP 624
P
Sbjct: 1360 TTP 1362
Score = 27.9 bits (59), Expect = 7.7
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = +1
Query: 448 PCTSPSKPCSRCTRPVRTTGTCWTPATVSPTPYPSTRDTHSLTPSCVWTLARSRPHRLP 624
P T+P KP T TT +P+T P PST T + PS T + P P
Sbjct: 1259 PSTTPIKPSPSTTS---TTPIKPSPSTNPIKPSPSTTSTTPIKPSPSTTPIKPSPSTTP 1314
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 152 GNTARGASSPAKPALHIPEPLSTT 81
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 442 RPPCTSPSKPCSRCTRPVRTTGTCWTPATVSPTPYPSTRDTHS 570
+PP T+PSK + + P+ TT T AT +PT +T T +
Sbjct: 383 KPPTTTPSKATAPISDPMTTTTPTTTKAT-TPTTTKATASTQT 424
>SB_7573| Best HMM Match : Nucleoporin (HMM E-Value=0.21)
Length = 928
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Frame = -3
Query: 263 VFEVRIPLLLCASS-PTYESFC----PMPTITP*WRGLPTIEGNTARGASSPAKPALHIP 99
VF VR+P+L+C SS T+ C IT + L I ++A+ S P++P P
Sbjct: 375 VFPVRLPMLVCVSSVVTHVGVCFQHQCYKCITDCLQRLLAIRQSSAQSPSLPSRPG---P 431
Query: 98 EPLSTTNAAT 69
P NA T
Sbjct: 432 PPTPDPNALT 441
>SB_56329| Best HMM Match : DUF112 (HMM E-Value=4.3)
Length = 573
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +3
Query: 429 ETFNTPAMYVAIQAVLSLYASGPYHRYVLDSGDGVSHTVPIYEGYALPHAILRLDFGPV 605
+ F +++A + V++ S RY+ DSG +S V Y Y + + FGP+
Sbjct: 319 DRFGARQVFIASRHVITTIPSMHRARYIRDSGSLLSSAVESYANYFGIIQLCSIGFGPI 377
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +1
Query: 424 CSKHSTRPPCTSPSKPCSRCTRPVRTTGTCWTPATVSPTPYPSTRDTHSLTPSCVWTLA 600
CS+ +T PP T+ S T+ + T TP T T P +L P T+A
Sbjct: 620 CSRPTT-PPVTTTKSTTSSTTKGTTASTTTSTPTTTPTTRPPCNLHCQTLNPDGTCTVA 677
>SB_5696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +1
Query: 430 KHSTRPPCTSPSKPCSRCTRPVRTTGTCWTPATVSPTPYPSTRDTHSLTP 579
+H +P T PS+P P++T +P +PT P + T + P
Sbjct: 189 QHKDQP--TGPSQPLPAAVPPIKTKPAAPSPVKATPTVAPLVKATPMVAP 236
>SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05)
Length = 1878
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +1
Query: 430 KHSTRPPCTSPSKPCSRCTRPVRTTGTCWTPATVSPTPYPSTRDTHSLTP 579
+H +P T PS+P P++T +P +PT P + T + P
Sbjct: 244 QHKDQP--TGPSQPLPAAVPPIKTKPAAPSPVKATPTVAPLVKATPMVAP 291
>SB_19383| Best HMM Match : Rpr2 (HMM E-Value=0.74)
Length = 335
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Frame = +3
Query: 246 YPDLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT-EAPLNPKANREKMTQI 422
Y DL Y H ++T ++K+W F L E + ++ +APLN ++ Q+
Sbjct: 14 YADLTYSNTHLLITVRSQVDKLWLGLFVTLLTQGLWESGITVSQQAPLNIIKSK---WQL 70
Query: 423 MFETFNTPAMYVAIQAVLSLYASGPYHRYVL-DSGD 527
+ ++ A +A + + S++ + + R +L D D
Sbjct: 71 LENFVSSVAKTLASRRITSIFHAAKHPRVILQDQSD 106
>SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23)
Length = 932
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 10/57 (17%)
Frame = +1
Query: 454 TSPSKPCSRCTRPVRTTGTCWTPATVS---------PTPYPSTRDTHSLTPSC-VWT 594
T S+PC +CT V T T A S PTP S R+ H +P WT
Sbjct: 38 TGLSRPCQKCTVFVSTPDNSVTGAVASSVPSFGVELPTPRTSARNPHQRSPPLQAWT 94
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/62 (30%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
Frame = +1
Query: 436 STRPPCTSPSKPCSRCTRPVRTTGTCWTP---ATVSPTPYPSTRDTHSLTPSCVWTLARS 606
+T P T+P T+P TT TP P P T T S PS +
Sbjct: 1794 TTTPETTTPRTTTPETTKPRTTTPKTTTPKKTTAAKKAPLPVTHATTSHAPSTTENPTTA 1853
Query: 607 RP 612
RP
Sbjct: 1854 RP 1855
>SB_33399| Best HMM Match : Ank (HMM E-Value=0)
Length = 1416
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -3
Query: 266 GVFEVRIPLLLCASSPTYESFCPMPTITP*WRGLPTI 156
G +P A+SP Y S P+PT TP PTI
Sbjct: 1210 GALFTPLPHETSATSPPYTSASPVPTTTPSASSSPTI 1246
>SB_27892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1441
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 481 CTRPVRTTGTCWTPATVSPTPYPS 552
C++P T GTC P +SP P PS
Sbjct: 517 CSQPDNTAGTCSCPQRISP-PTPS 539
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 152 GNTARGASSPAKPALHIPEPLSTT 81
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 152 GNTARGASSPAKPALHIPEPLSTT 81
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_25842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +1
Query: 424 CSKHSTRPPCTSPSKPCSRCTRPVRTTGTCWTPATVSPTPYPSTRDTHSLTP 579
CS PP +P CTRP + G P + +PT P TR+ +P
Sbjct: 98 CSNKKPPPPPLNPVSKNEACTRPEKIPGPETIPKS-TPTD-PGTRNDPQKSP 147
>SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3762
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 496 RTTGTCWTPATVSPTPYPSTRDTHSLTPSCVW 591
+TTGT + PA+ SP + ++TP W
Sbjct: 854 QTTGTQFAPASASPAAAAAAAAASAITPQSFW 885
>SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 286
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +1
Query: 436 STRPPCTSPSKPCSRCTRPVRTTGTCWTPATVSPTPYPSTRDTHSLTPSCVWT 594
+T P + + P + T P TT T T T +PT +T +T + TP+ T
Sbjct: 149 TTTSPNATTTTPNTTTTTP-NTTTTTPTATTTTPTATTTTPNTTTNTPNATTT 200
>SB_40626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 979
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +3
Query: 192 RHGTERLVRRRRGT---EQKRYPDLKYPIEHGIVTNWDDMEKIWHHTFYNELR 341
++ TE + R R ++KRY +L ++ T+ +D+ K+W Y E R
Sbjct: 55 KYKTEEALNRSRAYLEFQRKRYGNLYQLLKGNTFTDAEDLVKLWDAAHYEEER 107
>SB_20050| Best HMM Match : RVT_1 (HMM E-Value=1.3e-07)
Length = 493
Score = 27.9 bits (59), Expect = 7.7
Identities = 27/83 (32%), Positives = 34/83 (40%), Gaps = 12/83 (14%)
Frame = +1
Query: 433 HSTRPPCTSPSKPCSR-----CTRPVR---TTGTC----WTPATVSPTPYPSTRDTHSLT 576
H TRP TSP+ +R CT+P T +C TP S P+P T + T
Sbjct: 70 HKTRPNYTSPTTNAARIVNEGCTKPASEHDVTCSCPQRETTPPRPSELPFPCTAANN--T 127
Query: 577 PSCVWTLARSRPHRLPHEDPHRA 645
W L R + PHRA
Sbjct: 128 KMKAWLLNRYASSTF-NTCPHRA 149
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,243,650
Number of Sequences: 59808
Number of extensions: 569757
Number of successful extensions: 2359
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2306
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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