Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20228
         (517 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            44   4e-06
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    34   0.002
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    25   1.1  
DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.      25   1.5  
AY330176-1|AAQ16282.1|  179|Anopheles gambiae odorant-binding pr...    24   2.6  
AJ618926-1|CAF02005.1|  315|Anopheles gambiae odorant-binding pr...    24   2.6  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    24   2.6  
DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.       24   3.5  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 43.6 bits (98), Expect = 4e-06
 Identities = 17/65 (26%), Positives = 35/65 (53%)
 Frame = +3

Query: 213 GCRSTSSSIPYEPRPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPN 392
           G    + ++  +   ++F + DTAGQE++  L   YY   Q AI+++D+ +  ++     
Sbjct: 58  GAAFLTQTLCIDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQNSDSFARAKT 117

Query: 393 WHRDL 407
           W ++L
Sbjct: 118 WVKEL 122



 Score = 32.3 bits (70), Expect = 0.010
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +1

Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLG 216
           FK VL+G+   GK++ V R + G+F +   +T+G
Sbjct: 25  FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 58


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 34.3 bits (75), Expect = 0.002
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +1

Query: 118 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVAT 210
           KCV+VGDG  GKT  +  + T  F  +YV T
Sbjct: 8   KCVVVGDGTVGKTCMLISYTTDSFPGEYVPT 38



 Score = 31.9 bits (69), Expect = 0.013
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +3

Query: 258 IRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPN-WHRDL 407
           +   + DTAGQE +  LR   Y Q    +I + V S  +++NV + W+ ++
Sbjct: 54  VSLGLWDTAGQEDYDRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEI 104


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = -3

Query: 491 IVFALTFLSLISTLFPHKXIGIPSHTRDQISMPVRYIFV 375
           +V A+ FL   +  F     GIP  +  ++ +PVR++F+
Sbjct: 247 LVGAVDFLEQPTIAFVRLAEGIPMPSITEVPIPVRFLFL 285


>DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.
          Length = 353

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = +1

Query: 118 KCVLVGDGGTGKTTFVKR 171
           K +L+G G +GK+TF+K+
Sbjct: 35  KLLLLGTGESGKSTFIKQ 52


>AY330176-1|AAQ16282.1|  179|Anopheles gambiae odorant-binding
           protein AgamOBP49 protein.
          Length = 179

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = +2

Query: 350 VRRNLSSYVQKCT*LA*RFGPVYVKVSLLXCAETKW 457
           +RR++++   KC   A  F     +++L  C + +W
Sbjct: 127 IRRDVANVPSKCNAFALLFHVCVTQITLKHCPDDRW 162


>AJ618926-1|CAF02005.1|  315|Anopheles gambiae odorant-binding
           protein OBPjj6b protein.
          Length = 315

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = +2

Query: 350 VRRNLSSYVQKCT*LA*RFGPVYVKVSLLXCAETKW 457
           +RR++++   KC   A  F     +++L  C + +W
Sbjct: 127 IRRDVANVPSKCNAFALLFHVCVTQITLKHCPDDRW 162


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 16/52 (30%), Positives = 18/52 (34%)
 Frame = -3

Query: 275 PHIKTNWPRFVWNTRGCTSTPRVATYFFSNSPVKCLLTKVVLPVPPSPTNTH 120
           P I T  P  VW      S P   T +    P     T  V   P + T TH
Sbjct: 150 PTITTTTP--VWTDPTTWSAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTH 199


>DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.
          Length = 409

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 169 RHLTGEFEKKYVATLGVEVHPLV 237
           RH++G+F + YV TL     PL+
Sbjct: 119 RHMSGDFPRDYVDTLKQLRSPLL 141


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 582,102
Number of Sequences: 2352
Number of extensions: 11912
Number of successful extensions: 34
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)