Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20228
(517 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 158 2e-39
U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein. 89 1e-18
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 53 1e-07
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 53 1e-07
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 51 4e-07
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 49 2e-06
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 49 2e-06
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 49 2e-06
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 48 4e-06
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 48 4e-06
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 47 9e-06
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 46 1e-05
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 46 1e-05
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 46 2e-05
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 46 2e-05
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 45 3e-05
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 45 4e-05
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 45 4e-05
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 45 4e-05
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 44 5e-05
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 44 6e-05
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 44 6e-05
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 44 6e-05
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 44 9e-05
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 43 1e-04
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 43 1e-04
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 43 1e-04
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 42 3e-04
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 42 3e-04
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 41 5e-04
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 41 5e-04
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 41 5e-04
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 41 5e-04
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 41 5e-04
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 41 5e-04
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 41 5e-04
U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical p... 41 6e-04
S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog p... 41 6e-04
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 40 8e-04
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 40 8e-04
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 40 8e-04
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 40 0.001
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 40 0.001
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 40 0.001
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 40 0.001
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 40 0.001
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 39 0.002
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 39 0.002
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 39 0.002
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 38 0.003
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 38 0.003
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 38 0.003
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 38 0.003
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 38 0.003
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 38 0.006
U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific ... 38 0.006
U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like prot... 38 0.006
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 38 0.006
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 38 0.006
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 38 0.006
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 38 0.006
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 38 0.006
U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein. 37 0.007
L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleot... 37 0.007
AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death a... 37 0.010
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 36 0.017
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 36 0.017
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 36 0.017
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 35 0.030
Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical pr... 35 0.030
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 35 0.030
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 35 0.030
U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein. 35 0.030
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 35 0.040
U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like prot... 34 0.069
U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein. 33 0.092
AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical ... 33 0.092
U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein. 33 0.16
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 31 0.65
AL117195-25|CAB55036.1| 1048|Caenorhabditis elegans Hypothetical... 30 0.85
AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical... 30 0.85
AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical... 30 0.85
AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gam... 30 0.85
AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gam... 30 0.85
U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein. 30 1.1
U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein. 29 1.5
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 29 1.5
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 29 1.5
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 29 1.5
Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical pr... 29 2.0
AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical... 29 2.0
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical pr... 29 2.6
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 29 2.6
Z71177-6|CAA94872.2| 1090|Caenorhabditis elegans Hypothetical pr... 28 4.6
AL110487-1|CAB54424.1| 610|Caenorhabditis elegans Hypothetical ... 28 4.6
Z77652-1|CAB01121.1| 254|Caenorhabditis elegans Hypothetical pr... 27 6.0
U97193-15|AAB52443.1| 1932|Caenorhabditis elegans Hypothetical p... 27 6.0
U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like prot... 27 6.0
AL161712-21|CAC70129.2| 729|Caenorhabditis elegans Hypothetical... 27 6.0
Z81577-1|CAB04651.3| 289|Caenorhabditis elegans Hypothetical pr... 27 8.0
U88180-6|AAB42300.1| 373|Caenorhabditis elegans Hypothetical pr... 27 8.0
L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical pr... 27 8.0
AL117193-13|CAB55004.2| 478|Caenorhabditis elegans Hypothetical... 27 8.0
AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical... 27 8.0
AL031627-14|CAA20965.1| 234|Caenorhabditis elegans Hypothetical... 27 8.0
AL031627-12|CAA20963.2| 305|Caenorhabditis elegans Hypothetical... 27 8.0
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 158 bits (384), Expect = 2e-39
Identities = 81/141 (57%), Positives = 93/141 (65%), Gaps = 4/141 (2%)
Frame = +1
Query: 100 DDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMXGT 279
D +PTFK VLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQ
Sbjct: 5 DGIPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQIRFNVWD 64
Query: 280 QPDKRSLVVLETDTIFKDNXLSSCST*PLELRTKMYLTGIEIW----SRVCEGIPIXLCG 447
+ L + C+ ++ ++ + W +RVCE IPI LCG
Sbjct: 65 TAGQEKFGGLRDGYYIQ----GQCAIIMFDVTARVTYKNVPNWHRDLARVCENIPIVLCG 120
Query: 448 NKVDIKDRKVKAKTIVFHRKR 510
NKVD+KDRKVKAKTI FHRK+
Sbjct: 121 NKVDVKDRKVKAKTITFHRKK 141
Score = 109 bits (262), Expect = 1e-24
Identities = 54/86 (62%), Positives = 60/86 (69%)
Frame = +3
Query: 258 IRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNWHRDLVPCM*RYPYX 437
IRFNV DTAGQEKFGGLRDGYYIQGQ AIIMFDVT+RVTYKNVPNWHRDL P
Sbjct: 58 IRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHRDLARVCENIPIV 117
Query: 438 LVRKQSGY*RQKS*GENYCFPQEKNL 515
L + +K + F ++KNL
Sbjct: 118 LCGNKVDVKDRKVKAKTITFHRKKNL 143
>U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein.
Length = 128
Score = 89.4 bits (212), Expect = 1e-18
Identities = 44/76 (57%), Positives = 50/76 (65%)
Frame = +3
Query: 288 QEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNWHRDLVPCM*RYPYXLVRKQSGY*R 467
QEKFGGLRDGYYIQGQ AIIMFDVT+RVTYKNVPNWH DL P L +
Sbjct: 2 QEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHHDLARVCENIPIVLCGNKVDVKD 61
Query: 468 QKS*GENYCFPQEKNL 515
+K + F ++KNL
Sbjct: 62 RKVKAKTITFHRKKNL 77
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 53.2 bits (122), Expect = 1e-07
Identities = 21/65 (32%), Positives = 37/65 (56%)
Frame = +3
Query: 213 GCRSTSSSIPYEPRPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPN 392
G + SI E + ++ + DTAGQE++ + YY A++++D+ VTY+NV
Sbjct: 45 GVEFATRSISVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVER 104
Query: 393 WHRDL 407
W ++L
Sbjct: 105 WLKEL 109
Score = 37.5 bits (83), Expect = 0.006
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
FK VL+GD G GK+ + R EF + +T+GVE
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVE 47
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 53.2 bits (122), Expect = 1e-07
Identities = 21/65 (32%), Positives = 37/65 (56%)
Frame = +3
Query: 213 GCRSTSSSIPYEPRPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPN 392
G + SI E + ++ + DTAGQE++ + YY A++++D+ VTY+NV
Sbjct: 45 GVEFATRSISVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVER 104
Query: 393 WHRDL 407
W ++L
Sbjct: 105 WLKEL 109
Score = 37.5 bits (83), Expect = 0.006
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
FK VL+GD G GK+ + R EF + +T+GVE
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVE 47
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 51.2 bits (117), Expect = 4e-07
Identities = 20/65 (30%), Positives = 39/65 (60%)
Frame = +3
Query: 213 GCRSTSSSIPYEPRPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPN 392
G + ++ + I+F + DTAGQE++ L YY Q AI+++D+T++ +++ N
Sbjct: 53 GAAFLTQTVCLDDATIKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQESFQKAKN 112
Query: 393 WHRDL 407
W ++L
Sbjct: 113 WVKEL 117
Score = 32.3 bits (70), Expect = 0.21
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLG 216
FK VL+G+ GK++ V R + G+F + +T+G
Sbjct: 20 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIG 53
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 48.8 bits (111), Expect = 2e-06
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +3
Query: 234 SIPYEPRPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNWHRDL 407
+I + + I+ + DTAGQE+F + YY I+++D+T+ +++N+ NW R++
Sbjct: 49 TIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNI 106
Score = 35.9 bits (79), Expect = 0.017
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
FK +L+GD G GKT + R F +++T+G++
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGID 44
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 48.8 bits (111), Expect = 2e-06
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +3
Query: 234 SIPYEPRPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNWHRDL 407
+I + + I+ + DTAGQE+F + YY I+++D+T+ +++N+ NW R++
Sbjct: 49 TIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNI 106
Score = 35.9 bits (79), Expect = 0.017
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
FK +L+GD G GKT + R F +++T+G++
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGID 44
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 48.8 bits (111), Expect = 2e-06
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +3
Query: 234 SIPYEPRPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNWHRDL 407
+I + + I+ + DTAGQE+F + YY I+++D+T+ +++N+ NW R++
Sbjct: 49 TIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNI 106
Score = 35.9 bits (79), Expect = 0.017
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
FK +L+GD G GKT + R F +++T+G++
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGID 44
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 48.0 bits (109), Expect = 4e-06
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +3
Query: 252 RPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNW 395
R I + DTAGQE+F + Y+ + ++MFDVTS ++ NV NW
Sbjct: 250 RAIAMQLWDTAGQERFRSITKQYFRKADGVVLMFDVTSEQSFLNVRNW 297
Score = 35.9 bits (79), Expect = 0.017
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
FK V VGD GKT F+ R F+ + AT+GV+
Sbjct: 203 FKVVFVGDSAVGKTCFLHRFCHNRFKPLFNATIGVD 238
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 48.0 bits (109), Expect = 4e-06
Identities = 18/58 (31%), Positives = 34/58 (58%)
Frame = +3
Query: 234 SIPYEPRPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNWHRDL 407
+I + + I+ + DTAGQE+F + YY I+++D+T + T+ NV W +++
Sbjct: 52 TIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEI 109
Score = 35.9 bits (79), Expect = 0.017
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
FK +L+GD G GK+ + R + + Y++T+GV+
Sbjct: 12 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVD 47
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 46.8 bits (106), Expect = 9e-06
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +3
Query: 258 IRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNWHRDL 407
+R V DTAGQE+F + Y A+I++DVT R T+++V W +DL
Sbjct: 105 VRLQVWDTAGQERFRCMVPMYMRNADAALIVYDVTDRNTFEDVEKWLKDL 154
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 118 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLG 216
K V++GD G GKT+ + RH G + AT+G
Sbjct: 54 KVVVLGDSGVGKTSIIYRHRYGAHYRPVNATIG 86
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 46.4 bits (105), Expect = 1e-05
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = +3
Query: 234 SIPYEPRPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNWHRDL 407
++ + + ++ +V DT GQE+F L YY A++++D+TSR ++ ++ +W DL
Sbjct: 47 NLEIDRKKVKLHVWDTCGQERFRSLVGSYYRHAIGALLVYDITSRESFYHLEHWLTDL 104
Score = 34.3 bits (75), Expect = 0.052
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
FK V++GD G GK+ + R + F+ + +TLG+E
Sbjct: 7 FKYVIIGDRGVGKSNLLLRFIGKPFDSIHPSTLGIE 42
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 46.4 bits (105), Expect = 1e-05
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +3
Query: 267 NVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNWHRDLVPCM 419
++ DTAGQEK+ L YY +++FD+T R +++ V NW ++ C+
Sbjct: 64 HIWDTAGQEKYHALGPIYYRGSNGVLLVFDITDRKSFEKVKNWVLEIKTCL 114
Score = 31.9 bits (69), Expect = 0.28
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 213
FK VL+G+G GK++ V R + +F K+++T+
Sbjct: 13 FKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTI 45
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 46.0 bits (104), Expect = 2e-05
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +3
Query: 258 IRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNWHRD 404
I+ + DTAGQE+F + YY A++++D+T R TY ++ +W D
Sbjct: 60 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLAD 108
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
FK +++GD G GK+ + + +F T+GVE
Sbjct: 12 FKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVE 47
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/59 (32%), Positives = 36/59 (61%)
Frame = +3
Query: 231 SSIPYEPRPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNWHRDL 407
+S+ + ++ + DTAGQE+F L YY Q I ++DVTSR +++ + +W +++
Sbjct: 24 TSMAIDGNRVKLAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEV 82
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/59 (32%), Positives = 36/59 (61%)
Frame = +3
Query: 231 SSIPYEPRPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNWHRDL 407
+S+ + ++ + DTAGQE+F L YY Q I ++DVTSR +++ + +W +++
Sbjct: 51 TSMAIDGNRVKLAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEV 109
Score = 33.9 bits (74), Expect = 0.069
Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Frame = +1
Query: 94 MADD----MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
M+DD + T K +++G+ G GK++ + R + F+ + AT+GV+
Sbjct: 1 MSDDSSSPLTTLKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVD 47
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 45.2 bits (102), Expect = 3e-05
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = +3
Query: 237 IPYEPRPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNWHRD 404
+ + + I+ + DTAGQE F + YY A++++D+T R T+ ++ +W D
Sbjct: 48 VTIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTSWLED 103
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
FK +++GD G GK+ + + F+ + T+GVE
Sbjct: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVE 42
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 44.8 bits (101), Expect = 4e-05
Identities = 19/87 (21%), Positives = 42/87 (48%)
Frame = +3
Query: 150 QNNLCQKTFDWRVREKIRCDSGCRSTSSSIPYEPRPIRFNVXDTAGQEKFGGLRDGYYIQ 329
+ +L + + R + + G + + + R + + DTAGQE+F L +Y
Sbjct: 22 KTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIWDTAGQERFQSLGVAFYRG 81
Query: 330 GQXAIIMFDVTSRVTYKNVPNWHRDLV 410
++ FDVT+ ++K++ +W + +
Sbjct: 82 ADCCVLAFDVTNAASFKSLDSWRDEFL 108
Score = 35.9 bits (79), Expect = 0.017
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +1
Query: 118 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
K +++GD G GKT+ + +++ F +Y AT+G +
Sbjct: 11 KVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGAD 45
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 44.8 bits (101), Expect = 4e-05
Identities = 14/48 (29%), Positives = 29/48 (60%)
Frame = +3
Query: 252 RPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNW 395
+ ++ + DTAGQE+F + YY ++++D+ +R +++N NW
Sbjct: 50 KKVKLQIWDTAGQERFRSVTTSYYRDADALLLVYDIANRASFENCRNW 97
Score = 30.3 bits (65), Expect = 0.85
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 118 KCVLVGDGGTGKTTFVKRHLTGEF-EKKYVATLGVE 222
K +L+GD TGKT + R+ G F +++T+G++
Sbjct: 4 KVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGID 39
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 44.8 bits (101), Expect = 4e-05
Identities = 14/48 (29%), Positives = 29/48 (60%)
Frame = +3
Query: 252 RPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNW 395
+ ++ + DTAGQE+F + YY ++++D+ +R +++N NW
Sbjct: 50 KKVKLQIWDTAGQERFRSVTTSYYRDADALLLVYDIANRASFENCRNW 97
Score = 30.3 bits (65), Expect = 0.85
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 118 KCVLVGDGGTGKTTFVKRHLTGEF-EKKYVATLGVE 222
K +L+GD TGKT + R+ G F +++T+G++
Sbjct: 4 KVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGID 39
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 44.4 bits (100), Expect = 5e-05
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = +3
Query: 258 IRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNWHRD 404
++ + DTAGQEKF + YY + ++D T+R ++++V NW ++
Sbjct: 67 VKLQLWDTAGQEKFRSITKSYYRNSVGVLAIYDTTNRESFEHVENWVKE 115
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 44.0 bits (99), Expect = 6e-05
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = +3
Query: 237 IPYEPRPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNWHRDLV 410
I + +P + DTAG E+F +RD Y GQ ++++ +TS+ T+ ++ N +V
Sbjct: 44 IEVDGQPSVLEILDTAGTEQFSSMRDLYIKNGQGFVVVYSITSQQTFHDIRNMKEQIV 101
Score = 30.7 bits (66), Expect = 0.65
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 106 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 213
M FK V++G GG GK+ + ++ F +KY T+
Sbjct: 1 MREFKVVVLGSGGVGKSALTVQFVSSTFIEKYDPTI 36
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 44.0 bits (99), Expect = 6e-05
Identities = 16/58 (27%), Positives = 34/58 (58%)
Frame = +3
Query: 234 SIPYEPRPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNWHRDL 407
+I + + I+ + DTAGQE+F + YY ++++D+T+ ++ N+ W R++
Sbjct: 50 TIELKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNI 107
Score = 35.5 bits (78), Expect = 0.023
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
FK +L+GD G GKT + R F +++T+G++
Sbjct: 10 FKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGID 45
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 44.0 bits (99), Expect = 6e-05
Identities = 16/58 (27%), Positives = 34/58 (58%)
Frame = +3
Query: 234 SIPYEPRPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNWHRDL 407
+I + + I+ + DTAGQE+F + YY ++++D+T+ ++ N+ W R++
Sbjct: 50 TIELKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNI 107
Score = 35.5 bits (78), Expect = 0.023
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
FK +L+GD G GKT + R F +++T+G++
Sbjct: 10 FKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGID 45
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 43.6 bits (98), Expect = 9e-05
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +3
Query: 228 SSSIPYEPRPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNWHRDL 407
S ++ E R IR + DTAGQE+F L Y A++++D+T+ ++ W D+
Sbjct: 50 SKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDV 109
Score = 35.1 bits (77), Expect = 0.030
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
FK V +G+ GKT+ + R + F+ Y AT+G++
Sbjct: 12 FKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGID 47
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 43.2 bits (97), Expect = 1e-04
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 12/139 (8%)
Frame = +1
Query: 94 MADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEV--HPLVFHTNRGQF-- 261
M D K + +GD G GKT+F+ R+ F ++++T+G++ +V+ ++RG F
Sbjct: 1 MGDYDYLIKFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGG 60
Query: 262 ----VLMXGTQPDKRSLVVLETDTIFKDN----XLSSCST*PLELRTKMYLTGIEIWSRV 417
VL+ + T F+D + + L + +L+ +++ +
Sbjct: 61 RGQRVLLQLWDTAGQERFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHA-Y 119
Query: 418 CEGIPIXLCGNKVDIKDRK 474
CE I +CGNK D+++R+
Sbjct: 120 CEQPDIIICGNKADLENRR 138
Score = 39.1 bits (87), Expect = 0.002
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +3
Query: 258 IRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNW 395
+ + DTAGQE+F L ++ I++FD+T+ ++ N+ +W
Sbjct: 65 VLLQLWDTAGQERFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDW 110
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 43.2 bits (97), Expect = 1e-04
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 12/139 (8%)
Frame = +1
Query: 94 MADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEV--HPLVFHTNRGQF-- 261
M D K + +GD G GKT+F+ R+ F ++++T+G++ +V+ ++RG F
Sbjct: 1 MGDYDYLIKFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGG 60
Query: 262 ----VLMXGTQPDKRSLVVLETDTIFKDN----XLSSCST*PLELRTKMYLTGIEIWSRV 417
VL+ + T F+D + + L + +L+ +++ +
Sbjct: 61 RGQRVLLQLWDTAGQERFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHA-Y 119
Query: 418 CEGIPIXLCGNKVDIKDRK 474
CE I +CGNK D+++R+
Sbjct: 120 CEQPDIIICGNKADLENRR 138
Score = 39.1 bits (87), Expect = 0.002
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +3
Query: 258 IRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNW 395
+ + DTAGQE+F L ++ I++FD+T+ ++ N+ +W
Sbjct: 65 VLLQLWDTAGQERFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDW 110
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 42.7 bits (96), Expect = 1e-04
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +3
Query: 228 SSSIPYEPRPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNWHRDL 407
S ++ E R +R + DTAGQE+F L Y A++++D+T+ ++ W D+
Sbjct: 49 SKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDV 108
Score = 35.1 bits (77), Expect = 0.030
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
FK V +G+ GKT+ + R + F+ Y AT+G++
Sbjct: 11 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGID 46
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 42.3 bits (95), Expect = 2e-04
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +3
Query: 258 IRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNWHRDL 407
+R V DT GQE F + YY A++++D+T R ++ ++ W DL
Sbjct: 55 VRLRVWDTCGQENFRSIIRAYYRNALGALLVYDITCRKSFVHLEQWLSDL 104
Score = 36.3 bits (80), Expect = 0.013
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
FK V++GDGG GK+ + R F+ + TLGVE
Sbjct: 7 FKYVIIGDGGVGKSNLLLRFTDELFDPIHTTTLGVE 42
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 41.9 bits (94), Expect = 3e-04
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +3
Query: 261 RFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNWHRDLV 410
R + DTAG E+F G+R+ YY Q +++F + T++N+ D++
Sbjct: 52 RLEILDTAGTEQFTGMRETYYRTAQGFVLVFSLAETSTFENLKQTFTDII 101
Score = 31.5 bits (68), Expect = 0.37
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 106 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 213
M +K V++G+GG GK+ +++ G F Y AT+
Sbjct: 1 MKEYKIVVLGNGGVGKSALTLQYVQGIFVHTYDATI 36
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 41.5 bits (93), Expect = 3e-04
Identities = 15/50 (30%), Positives = 30/50 (60%)
Frame = +3
Query: 258 IRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNWHRDL 407
++ + DTAGQE+F + YY ++++DVT+ ++ NV W +++
Sbjct: 59 VKLQIWDTAGQERFRTITSTYYRGTHGVVVVYDVTNGESFGNVKRWLQEI 108
Score = 37.5 bits (83), Expect = 0.006
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
FK +++GD G GK++ + R F + Y+ T+GV+
Sbjct: 11 FKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVD 46
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 41.1 bits (92), Expect = 5e-04
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +3
Query: 213 GCRSTSSSIPYEPRPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPN 392
G + I E + ++ + DTAG E+F YY A++++D++ TY++V
Sbjct: 42 GVEFATKIISVEGKAVKVQIWDTAGMERFRCGASSYYRGALGALLVYDISKHKTYESVEQ 101
Query: 393 W 395
W
Sbjct: 102 W 102
Score = 35.5 bits (78), Expect = 0.023
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
FK VL+G+ G GK+ + R EF K T+GVE
Sbjct: 9 FKIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVE 44
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 41.1 bits (92), Expect = 5e-04
Identities = 14/46 (30%), Positives = 28/46 (60%)
Frame = +3
Query: 258 IRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNW 395
++ + DTAGQE++ + YY I+M+D+T+ ++ +V +W
Sbjct: 71 VKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDW 116
Score = 35.1 bits (77), Expect = 0.030
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
FK +++G+ GKT+F+ R+ F +V+T+G++
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGID 58
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 41.1 bits (92), Expect = 5e-04
Identities = 14/46 (30%), Positives = 28/46 (60%)
Frame = +3
Query: 258 IRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNW 395
++ + DTAGQE++ + YY I+M+D+T+ ++ +V +W
Sbjct: 71 VKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDW 116
Score = 35.1 bits (77), Expect = 0.030
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
FK +++G+ GKT+F+ R+ F +V+T+G++
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGID 58
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 41.1 bits (92), Expect = 5e-04
Identities = 14/46 (30%), Positives = 28/46 (60%)
Frame = +3
Query: 258 IRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNW 395
++ + DTAGQE++ + YY I+M+D+T+ ++ +V +W
Sbjct: 71 VKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDW 116
Score = 35.1 bits (77), Expect = 0.030
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
FK +++G+ GKT+F+ R+ F +V+T+G++
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGID 58
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 41.1 bits (92), Expect = 5e-04
Identities = 14/46 (30%), Positives = 28/46 (60%)
Frame = +3
Query: 258 IRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNW 395
++ + DTAGQE++ + YY I+M+D+T+ ++ +V +W
Sbjct: 85 VKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDW 130
Score = 35.1 bits (77), Expect = 0.030
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
FK +++G+ GKT+F+ R+ F +V+T+G++
Sbjct: 37 FKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGID 72
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 41.1 bits (92), Expect = 5e-04
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +3
Query: 258 IRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNW 395
I+ + DTAGQE+F + YY ++++DV+ + ++ +P W
Sbjct: 56 IKLQIWDTAGQERFRSITQSYYRSAHAIVLVYDVSCQPSFDCLPEW 101
Score = 37.1 bits (82), Expect = 0.007
Identities = 19/43 (44%), Positives = 24/43 (55%)
Frame = +1
Query: 94 MADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
M D FK VLVG+ G GKT V++ G F AT+GV+
Sbjct: 1 MEDYKYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVD 43
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 41.1 bits (92), Expect = 5e-04
Identities = 14/46 (30%), Positives = 28/46 (60%)
Frame = +3
Query: 258 IRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNW 395
++ + DTAGQE++ + YY I+M+D+T+ ++ +V +W
Sbjct: 71 VKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDW 116
Score = 35.1 bits (77), Expect = 0.030
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
FK +++G+ GKT+F+ R+ F +V+T+G++
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGID 58
>U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical
protein R07G3.1 protein.
Length = 191
Score = 40.7 bits (91), Expect = 6e-04
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +1
Query: 106 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 213
M T KCV+VGDG GKT + + T +F +YV T+
Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV 36
Score = 33.9 bits (74), Expect = 0.069
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +3
Query: 255 PIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNV-PNWHRDLVPCM*RYP 431
P + DTAGQE + LR Y Q ++ F V + +++NV W ++ + P
Sbjct: 50 PYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVAPASFENVREKWVPEISHHCSKTP 109
Query: 432 YXLVRKQ 452
+ LV Q
Sbjct: 110 FLLVGTQ 116
>S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog
protein.
Length = 191
Score = 40.7 bits (91), Expect = 6e-04
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +1
Query: 106 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 213
M T KCV+VGDG GKT + + T +F +YV T+
Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV 36
Score = 33.9 bits (74), Expect = 0.069
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +3
Query: 255 PIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNV-PNWHRDLVPCM*RYP 431
P + DTAGQE + LR Y Q ++ F V + +++NV W ++ + P
Sbjct: 50 PYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVAPASFENVREKWVPEISHHCSKTP 109
Query: 432 YXLVRKQ 452
+ LV Q
Sbjct: 110 FLLVGTQ 116
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 40.3 bits (90), Expect = 8e-04
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +3
Query: 267 NVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNWHRDL 407
++ DTAGQE++ +RD Y G+ +++F V +++NV N+ +
Sbjct: 54 DILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNEAKSFENVANYREQI 100
Score = 31.1 bits (67), Expect = 0.49
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 106 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 213
M +K V+VGDGG GK+ + + F ++Y T+
Sbjct: 1 MTEYKLVVVGDGGVGKSALTIQLIQNHFVEEYDPTI 36
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 40.3 bits (90), Expect = 8e-04
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Frame = +1
Query: 112 TFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTN-RGQFVLMXGTQPD 288
TF+ V+ GD GK++FV R + +F + +TLGV+ H + + R + + T
Sbjct: 461 TFRIVMCGDAAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVALQLWDTAGQ 520
Query: 289 KRSLVVLETDTIFKDNXL---SSCST*PLELRTKMYLTGIEIWSRVCEGIPIXLCGNKVD 459
+R + ++ D + C+ LR + ++ I+ IPI L GNKVD
Sbjct: 521 ERFRSLCKSYFRRADGAILVYDVCAEQSF-LRVRDWIETIK--ESTERSIPIILVGNKVD 577
Query: 460 IK 465
++
Sbjct: 578 MR 579
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +3
Query: 234 SIPYEPRPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNW 395
++ + R + + DTAGQE+F L Y+ + AI+++DV + ++ V +W
Sbjct: 502 TVNVDGRNVALQLWDTAGQERFRSLCKSYFRRADGAILVYDVCAEQSFLRVRDW 555
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 40.3 bits (90), Expect = 8e-04
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +3
Query: 267 NVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNWHRDL 407
++ DTAGQE++ +RD Y G+ +++F V +++NV N+ +
Sbjct: 57 DILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNEAKSFENVANYREQI 103
Score = 31.1 bits (67), Expect = 0.49
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 106 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 213
M +K V+VGDGG GK+ + + F ++Y T+
Sbjct: 4 MTEYKLVVVGDGGVGKSALTIQLIQNHFVEEYDPTI 39
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 39.9 bits (89), Expect = 0.001
Identities = 14/65 (21%), Positives = 33/65 (50%)
Frame = +3
Query: 213 GCRSTSSSIPYEPRPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPN 392
G T ++ + + ++ + DT GQE+F + YY ++ +D+T + ++ ++
Sbjct: 44 GVDFTMKTLVVDGKRVKLQIWDTGGQERFRTITQSYYRSANGIVLCYDITCKQSFGSLQR 103
Query: 393 WHRDL 407
W D+
Sbjct: 104 WIDDV 108
Score = 37.5 bits (83), Expect = 0.006
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
FK VLVGD G GKT V+R G F + T+GV+
Sbjct: 11 FKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVD 46
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 261 RFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNWH 398
+ + DTAGQE+F +R+ Y G +I+F VT R +++ V H
Sbjct: 66 KLEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLH 111
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 261 RFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNWH 398
+ + DTAGQE+F +R+ Y G +I+F VT R +++ V H
Sbjct: 66 KLEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLH 111
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 261 RFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNWH 398
+ + DTAGQE+F +R+ Y G +I+F VT R +++ V H
Sbjct: 66 KLEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLH 111
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 261 RFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNWH 398
+ + DTAGQE+F +R+ Y G +I+F VT R +++ V H
Sbjct: 66 KLEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLH 111
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +3
Query: 267 NVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNWHRDLVPCM*R--YPYXL 440
+V DTAGQE+F +R+ Y G+ +++F VT R +++ + ++ R YP L
Sbjct: 68 DVLDTAGQEEFSAMREQYIRGGRGFLLVFSVTERKSFEEAHKLYNQVLRVKDRSEYPVLL 127
Query: 441 V 443
V
Sbjct: 128 V 128
Score = 30.7 bits (66), Expect = 0.65
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 106 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 213
+P +K V++GDGG GK++ + +F Y T+
Sbjct: 15 LPYYKLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTI 50
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +3
Query: 267 NVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNWHRDLVPCM*R--YPYXL 440
+V DTAGQE+F +R+ Y G+ +++F VT R +++ + ++ R YP L
Sbjct: 68 DVLDTAGQEEFSAMREQYIRGGRGFLLVFSVTERKSFEEAHKLYNQVLRVKDRSEYPVLL 127
Query: 441 V 443
V
Sbjct: 128 V 128
Score = 30.7 bits (66), Expect = 0.65
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 106 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 213
+P +K V++GDGG GK++ + +F Y T+
Sbjct: 15 LPYYKLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTI 50
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 100 DDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFV 264
D + T K V+VG+ G GKT + L FE + T+G++ + N GQ +
Sbjct: 2 DTIKTVKVVVVGESGAGKTALLTCFLDNTFETDPLTTIGIDFKHKIVQLNDGQSI 56
Score = 33.1 bits (72), Expect = 0.12
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 258 IRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNW 395
IR + DTAGQE+F L Y + A+++ D++ +++ W
Sbjct: 56 IRLQLWDTAGQERFRQLAPAYIRSARVALLVIDLSDENCVEHLIRW 101
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 38.3 bits (85), Expect = 0.003
Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 5/126 (3%)
Frame = +1
Query: 106 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMXGT-- 279
M KCV+VGDG GKT + + T F +Y+ T+ V R + + T
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLLSYTTNAFPGEYILTVFDTYSTNVMVDGRPINLSLWDTAG 60
Query: 280 QPDK---RSLVVLETDTIFKDNXLSSCST*PLELRTKMYLTGIEIWSRVCEGIPIXLCGN 450
Q D R L +TD L++ ++ +R K Y E+ S C PI L G
Sbjct: 61 QDDYDQFRHLSFPQTDVFLVCFALNNPASFE-NVRAKWY---PEV-SHHCPNTPIILVGT 115
Query: 451 KVDIKD 468
K D+++
Sbjct: 116 KADLRE 121
Score = 33.5 bits (73), Expect = 0.092
Identities = 15/61 (24%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +3
Query: 228 SSSIPYEPRPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNV-PNWHRD 404
S+++ + RPI ++ DTAGQ+ + R + Q ++ F + + +++NV W+ +
Sbjct: 41 STNVMVDGRPINLSLWDTAGQDDYDQFRHLSFPQTDVFLVCFALNNPASFENVRAKWYPE 100
Query: 405 L 407
+
Sbjct: 101 V 101
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 38.3 bits (85), Expect = 0.003
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +1
Query: 100 DDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
+D ++K +++GD G GKT+ ++R + F Y T+GV+
Sbjct: 7 NDKISYKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVD 47
Score = 35.1 bits (77), Expect = 0.030
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 258 IRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNWHRDL 407
+ + D +GQ+++G + YY AII+ D T T + W DL
Sbjct: 61 VHLQIWDISGQDRYGVMTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDL 110
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 38.3 bits (85), Expect = 0.003
Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 5/126 (3%)
Frame = +1
Query: 106 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMXGT-- 279
M KCV+VGDG GKT + + T F +Y+ T+ V R + + T
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLLSYTTNAFPGEYILTVFDTYSTNVMVDGRPINLSLWDTAG 60
Query: 280 QPDK---RSLVVLETDTIFKDNXLSSCST*PLELRTKMYLTGIEIWSRVCEGIPIXLCGN 450
Q D R L +TD L++ ++ +R K Y E+ S C PI L G
Sbjct: 61 QDDYDQFRHLSFPQTDVFLVCFALNNPASFE-NVRAKWY---PEV-SHHCPNTPIILVGT 115
Query: 451 KVDIKD 468
K D+++
Sbjct: 116 KADLRE 121
Score = 33.5 bits (73), Expect = 0.092
Identities = 15/61 (24%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +3
Query: 228 SSSIPYEPRPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNV-PNWHRD 404
S+++ + RPI ++ DTAGQ+ + R + Q ++ F + + +++NV W+ +
Sbjct: 41 STNVMVDGRPINLSLWDTAGQDDYDQFRHLSFPQTDVFLVCFALNNPASFENVRAKWYPE 100
Query: 405 L 407
+
Sbjct: 101 V 101
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 38.3 bits (85), Expect = 0.003
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +1
Query: 100 DDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
+D ++K +++GD G GKT+ ++R + F Y T+GV+
Sbjct: 7 NDKISYKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVD 47
Score = 35.1 bits (77), Expect = 0.030
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 258 IRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPNWHRDL 407
+ + D +GQ+++G + YY AII+ D T T + W DL
Sbjct: 61 VHLQIWDISGQDRYGVMTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDL 110
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 38.3 bits (85), Expect = 0.003
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 103 DMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
D K V+VGDG +GKT+ +R F+K Y TLG++
Sbjct: 32 DDKVIKIVVVGDGASGKTSICQRFAKESFDKSYHQTLGLD 71
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 37.5 bits (83), Expect = 0.006
Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 5/126 (3%)
Frame = +1
Query: 106 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMXGT-- 279
M KCV+VGDG GKT + + T F +Y+ T+ V R + + T
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAG 60
Query: 280 QPD---KRSLVVLETDTIFKDNXLSSCST*PLELRTKMYLTGIEIWSRVCEGIPIXLCGN 450
Q D R L +TD L++ ++ +R K Y E+ S C PI L G
Sbjct: 61 QEDYDRLRPLSYPQTDVFLVCFALNNPASFE-NVRAKWY---PEV-SHHCPNTPIILVGT 115
Query: 451 KVDIKD 468
K D+++
Sbjct: 116 KADLRE 121
Score = 37.5 bits (83), Expect = 0.006
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +3
Query: 228 SSSIPYEPRPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNV-PNWHRD 404
S+++ + RPI + DTAGQE + LR Y Q ++ F + + +++NV W+ +
Sbjct: 41 SANVMVDGRPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPE 100
Query: 405 L 407
+
Sbjct: 101 V 101
>U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific
family, class rprotein 2 protein.
Length = 332
Score = 37.5 bits (83), Expect = 0.006
Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 12/145 (8%)
Frame = +1
Query: 91 KMADDM--PTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFV 264
K D+M ++ V++G GKT ++R+L EF KY T+ ++H F
Sbjct: 8 KTEDEMCEERYRLVVLGSAKVGKTNIIRRYLYNEFSSKYKETI-EDLHSREFRIQGVPLP 66
Query: 265 L-MXGTQ---PDKRSLVVLETDTIFKDNXLSSCST*PLELRTKMYLTGIEIWSRVC---- 420
L + T PD R L + + ++ + +IW +C
Sbjct: 67 LDILDTNFNFPDMRRLSIASASAFLLVFSVDDVTS---------FKEMSDIWQEICSRRS 117
Query: 421 --EGIPIXLCGNKVDIKDRKVKAKT 489
+PI + GNK D++++K+ +T
Sbjct: 118 DLNELPIVVVGNKCDVENKKIYEET 142
>U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like
protein.
Length = 69
Score = 37.5 bits (83), Expect = 0.006
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
FK VLVGD G GKT V+R G F + T+GV+
Sbjct: 11 FKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVD 46
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 37.5 bits (83), Expect = 0.006
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
FK +++GD G GK++ + R F + Y+ T+GV+
Sbjct: 11 FKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVD 46
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 37.5 bits (83), Expect = 0.006
Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 5/126 (3%)
Frame = +1
Query: 106 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMXGT-- 279
M KCV+VGDG GKT + + T F +Y+ T+ V R + + T
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAG 60
Query: 280 QPD---KRSLVVLETDTIFKDNXLSSCST*PLELRTKMYLTGIEIWSRVCEGIPIXLCGN 450
Q D R L +TD L++ ++ +R K Y E+ S C PI L G
Sbjct: 61 QEDYDRLRPLSYPQTDVFLVCFALNNPASFE-NVRAKWY---PEV-SHHCPNTPIILVGT 115
Query: 451 KVDIKD 468
K D+++
Sbjct: 116 KADLRE 121
Score = 37.5 bits (83), Expect = 0.006
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +3
Query: 228 SSSIPYEPRPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNV-PNWHRD 404
S+++ + RPI + DTAGQE + LR Y Q ++ F + + +++NV W+ +
Sbjct: 41 SANVMVDGRPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPE 100
Query: 405 L 407
+
Sbjct: 101 V 101
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 37.5 bits (83), Expect = 0.006
Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 5/126 (3%)
Frame = +1
Query: 106 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMXGT-- 279
M KCV+VGDG GKT + + T F +Y+ T+ V R + + T
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAG 60
Query: 280 QPD---KRSLVVLETDTIFKDNXLSSCST*PLELRTKMYLTGIEIWSRVCEGIPIXLCGN 450
Q D R L +TD L++ ++ +R K Y E+ S C PI L G
Sbjct: 61 QEDYDRLRPLSYPQTDVFLVCFALNNPASFE-NVRAKWY---PEV-SHHCPNTPIILVGT 115
Query: 451 KVDIKD 468
K D+++
Sbjct: 116 KADLRE 121
Score = 37.5 bits (83), Expect = 0.006
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +3
Query: 228 SSSIPYEPRPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNV-PNWHRD 404
S+++ + RPI + DTAGQE + LR Y Q ++ F + + +++NV W+ +
Sbjct: 41 SANVMVDGRPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPE 100
Query: 405 L 407
+
Sbjct: 101 V 101
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 37.5 bits (83), Expect = 0.006
Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 5/126 (3%)
Frame = +1
Query: 106 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMXGT-- 279
M KCV+VGDG GKT + + T F +Y+ T+ V R + + T
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAG 60
Query: 280 QPD---KRSLVVLETDTIFKDNXLSSCST*PLELRTKMYLTGIEIWSRVCEGIPIXLCGN 450
Q D R L +TD L++ ++ +R K Y E+ S C PI L G
Sbjct: 61 QEDYDRLRPLSYPQTDVFLVCFALNNPASFE-NVRAKWY---PEV-SHHCPNTPIILVGT 115
Query: 451 KVDIKD 468
K D+++
Sbjct: 116 KADLRE 121
Score = 37.5 bits (83), Expect = 0.006
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +3
Query: 228 SSSIPYEPRPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNV-PNWHRD 404
S+++ + RPI + DTAGQE + LR Y Q ++ F + + +++NV W+ +
Sbjct: 41 SANVMVDGRPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPE 100
Query: 405 L 407
+
Sbjct: 101 V 101
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 37.5 bits (83), Expect = 0.006
Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 5/126 (3%)
Frame = +1
Query: 106 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMXGT-- 279
M KCV+VGDG GKT + + T F +Y+ T+ V R + + T
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAG 60
Query: 280 QPD---KRSLVVLETDTIFKDNXLSSCST*PLELRTKMYLTGIEIWSRVCEGIPIXLCGN 450
Q D R L +TD L++ ++ +R K Y E+ S C PI L G
Sbjct: 61 QEDYDRLRPLSYPQTDVFLVCFALNNPASFE-NVRAKWY---PEV-SHHCPNTPIILVGT 115
Query: 451 KVDIKD 468
K D+++
Sbjct: 116 KADLRE 121
Score = 37.5 bits (83), Expect = 0.006
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +3
Query: 228 SSSIPYEPRPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNV-PNWHRD 404
S+++ + RPI + DTAGQE + LR Y Q ++ F + + +++NV W+ +
Sbjct: 41 SANVMVDGRPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPE 100
Query: 405 L 407
+
Sbjct: 101 V 101
>U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein.
Length = 74
Score = 37.1 bits (82), Expect = 0.007
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +1
Query: 94 MADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEV--HPLVFHTNRGQF 261
M D K + GD G GKT+F+ R+ F ++++T+G++ +V+ ++RG F
Sbjct: 1 MGDYDYLIKFLAPGDPGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYESSRGGF 58
>L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 188
Score = 37.1 bits (82), Expect = 0.007
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 118 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 213
KCV+VGDG GKT + + T +F +YV T+
Sbjct: 2 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV 33
Score = 33.9 bits (74), Expect = 0.069
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +3
Query: 255 PIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNV-PNWHRDLVPCM*RYP 431
P + DTAGQE + LR Y Q ++ F V + +++NV W ++ + P
Sbjct: 47 PYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVAPASFENVREKWVPEISHHCSKTP 106
Query: 432 YXLVRKQ 452
+ LV Q
Sbjct: 107 FLLVGTQ 113
>AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death
abnormality protein10, isoform a protein.
Length = 129
Score = 36.7 bits (81), Expect = 0.010
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 106 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 213
M KCV+VGDG GKT + + T F +Y+ T+
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV 36
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 228 SSSIPYEPRPIRFNVXDTAGQEKFGGLRD 314
S+++ + RPI + DTAGQE + LR+
Sbjct: 41 SANVMVDGRPINLGLWDTAGQEDYDRLRE 69
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 35.9 bits (79), Expect = 0.017
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = +3
Query: 270 VXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNV 386
+ DTAG E+F +RD Y GQ ++++ +T++ T+ ++
Sbjct: 55 ILDTAGTEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDL 93
Score = 30.7 bits (66), Expect = 0.65
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 106 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 213
M +K V++G GG GK+ + + G F +KY T+
Sbjct: 1 MREYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTI 36
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 35.9 bits (79), Expect = 0.017
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
FK +L+GD G GK+ + R + + Y++T+GV+
Sbjct: 12 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVD 47
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 35.9 bits (79), Expect = 0.017
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 267 NVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYK 380
++ DTAGQE + +RD YY G+ I +F + +++
Sbjct: 68 DILDTAGQEDYSAIRDNYYRSGEGFICVFSILDMESFE 105
Score = 27.9 bits (59), Expect = 4.6
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 118 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVAT 210
K ++VG GG GK+ + + EF ++Y T
Sbjct: 19 KVIMVGTGGVGKSALTLQFMYDEFVEEYEPT 49
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 35.1 bits (77), Expect = 0.030
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 94 MADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 213
M+ KCV+VGDG GKT + + T F +YV T+
Sbjct: 1 MSSPSRQIKCVVVGDGTVGKTCMLISYTTDSFPVQYVPTV 40
Score = 34.3 bits (75), Expect = 0.052
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 228 SSSIPYEPRPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNV 386
S+ + + + + DTAGQE + LR Y Q I+ F V S V++ NV
Sbjct: 45 SAQMSLDGNVVNLGLWDTAGQEDYDRLRPLSYPQTDVFILCFSVVSPVSFDNV 97
>Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical
protein F22E12.2 protein.
Length = 207
Score = 35.1 bits (77), Expect = 0.030
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +3
Query: 246 EPRPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVP-NWHRDL 407
+ +PIR + DTAGQ F LR Y +I++ V ++++V +W+ ++
Sbjct: 53 DKKPIRLQLHDTAGQSSFDTLRPLCYTDADVFVIVYSVVDLQSFEDVSHHWYPEV 107
Score = 31.9 bits (69), Expect = 0.28
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 100 DDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVAT 210
+D KC+ VG+ GKT+ + + T + YV T
Sbjct: 5 EDEKCLKCIFVGNAAVGKTSMIVSYTTNVYPHNYVPT 41
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 35.1 bits (77), Expect = 0.030
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +1
Query: 85 TTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
+TK TFK ++VG+ GKT R G F + AT+GV+
Sbjct: 91 STKTYKQKRTFKVIIVGNAAVGKTCLSFRFCCGRFPEHTEATIGVD 136
Score = 32.7 bits (71), Expect = 0.16
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +3
Query: 183 RVREKIRCDSGCRSTSSSIPYEPRPIRFNVXDTAGQEKFGGLRDGYYIQGQXAII-MFDV 359
R E G S E +R + DTAGQE++ +Y + A++ ++DV
Sbjct: 124 RFPEHTEATIGVDFRERSCVIENELLRVQLWDTAGQERYRQSIVAHYYRNVNAVVFVYDV 183
Query: 360 TSRVTYKNVPNWHRD 404
T R ++ ++ W ++
Sbjct: 184 TCRESFNDLALWIKE 198
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 35.1 bits (77), Expect = 0.030
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 94 MADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 213
M+ KCV+VGDG GKT + + T F +YV T+
Sbjct: 1 MSSPSRQIKCVVVGDGTVGKTCMLISYTTDSFPVQYVPTV 40
Score = 34.3 bits (75), Expect = 0.052
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 228 SSSIPYEPRPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNV 386
S+ + + + + DTAGQE + LR Y Q I+ F V S V++ NV
Sbjct: 45 SAQMSLDGNVVNLGLWDTAGQEDYDRLRPLSYPQTDVFILCFSVVSPVSFDNV 97
>U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein.
Length = 65
Score = 35.1 bits (77), Expect = 0.030
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
FK V +G+ GKT+ + R + F+ Y AT+G++
Sbjct: 12 FKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGID 47
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 34.7 bits (76), Expect = 0.040
Identities = 13/51 (25%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +3
Query: 258 IRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVPN-WHRDL 407
IR + DTAG E++ + + YY + ++D+T+ +++N+ W +++
Sbjct: 55 IRLELWDTAGMERYRTIYNSYYHSAHGVMCVYDMTNEKSFENLEKYWLKEI 105
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
FK V+VGD GK+ + R F +++TLGV+
Sbjct: 7 FKIVVVGDHNCGKSCILLRFAENSFRMDHISTLGVD 42
>U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like
protein.
Length = 53
Score = 33.9 bits (74), Expect = 0.069
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +1
Query: 94 MADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
M D FK VLV + G GKT V++ G F AT+GV+
Sbjct: 1 MEDYKYLFKVVLVPNAGVGKTCLVRKFTQGIFPPGQSATIGVD 43
>U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein.
Length = 67
Score = 33.5 bits (73), Expect = 0.092
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
F+ V +G+ GKT+ + R + F+ Y AT+G++
Sbjct: 11 FELVFLGEQSVGKTSLITRFMYDSFDNTYQATIGID 46
>AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical
protein Y52B11A.4 protein.
Length = 467
Score = 33.5 bits (73), Expect = 0.092
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +1
Query: 61 ITK*NSHKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKY 201
+ K ++ T + T+K +VGD GTGK++ + + +T E++ +
Sbjct: 220 VAKMTVNEMTNASTSHKTYKIYVVGDTGTGKSSLISQLITSEYKNAF 266
>U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein.
Length = 115
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 118 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLG 216
K V++GD G GKT+ + RH G + AT+G
Sbjct: 54 KVVVLGDSGVGKTSIIYRHRYGAHYRPVNATIG 86
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 30.7 bits (66), Expect = 0.65
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +3
Query: 258 IRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSR 368
I+FNV D GQ+K L YY Q I + D R
Sbjct: 57 IKFNVWDVGGQDKIRPLWRHYYTGTQALIFVMDAADR 93
>AL117195-25|CAB55036.1| 1048|Caenorhabditis elegans Hypothetical
protein Y57A10A.31 protein.
Length = 1048
Score = 30.3 bits (65), Expect = 0.85
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -2
Query: 156 CFASTTISYQ-YTLECGHIICHFRCFMAILLRDCIRKSRFN 37
C A T IS Y LECGH++C R + +R I + +FN
Sbjct: 807 CTAETGISNDFYRLECGHVMC--RTCINTQIRSRIDEQQFN 845
>AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical
protein Y39A1A.15b protein.
Length = 951
Score = 30.3 bits (65), Expect = 0.85
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 73 NSHKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEF 189
NSH+ T ++ + K +VG +GKT V R+LTG +
Sbjct: 66 NSHEWT-LSRSISEMKLGIVGTSQSGKTALVHRYLTGTY 103
>AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical
protein Y39A1A.15a protein.
Length = 1107
Score = 30.3 bits (65), Expect = 0.85
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 73 NSHKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEF 189
NSH+ T ++ + K +VG +GKT V R+LTG +
Sbjct: 222 NSHEWT-LSRSISEMKLGIVGTSQSGKTALVHRYLTGTY 259
>AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gamma
1B protein.
Length = 1107
Score = 30.3 bits (65), Expect = 0.85
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 73 NSHKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEF 189
NSH+ T ++ + K +VG +GKT V R+LTG +
Sbjct: 222 NSHEWT-LSRSISEMKLGIVGTSQSGKTALVHRYLTGTY 259
>AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gamma
1A protein.
Length = 952
Score = 30.3 bits (65), Expect = 0.85
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 73 NSHKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEF 189
NSH+ T ++ + K +VG +GKT V R+LTG +
Sbjct: 66 NSHEWT-LSRSISEMKLGIVGTSQSGKTALVHRYLTGTY 103
>U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein.
Length = 66
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 276 DTAGQEKFGGLRDGYYIQGQXAII-MFDVTSRVTYKNVPNWHRD 404
DTAGQE++ +Y + A++ ++DVT R ++ ++ W ++
Sbjct: 2 DTAGQERYRQSIVAHYYRNVNAVVFVYDVTCRESFNDLALWIKE 45
>U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein.
Length = 70
Score = 29.5 bits (63), Expect = 1.5
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 118 KCVLVGDGGTGKTTFVKRHLTGEFEKKYV 204
K +++GD G GKT+ + ++ G+ +YV
Sbjct: 11 KVIILGDSGVGKTSLMNQYEIGDLMNQYV 39
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein.
Length = 66
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
FK +++GD G GK+ + + F+ + T+GVE
Sbjct: 7 FKHIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVE 42
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +3
Query: 231 SSIPYEPRPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVP 389
+ I + + + + DTAGQE + LR Y ++ F + S + +N+P
Sbjct: 44 ADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIP 96
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +3
Query: 231 SSIPYEPRPIRFNVXDTAGQEKFGGLRDGYYIQGQXAIIMFDVTSRVTYKNVP 389
+ I + + + + DTAGQE + LR Y ++ F + S + +N+P
Sbjct: 44 ADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIP 96
>Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical
protein F08G12.1 protein.
Length = 635
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 118 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEV 225
K V+ GD GKT KR F+++YVAT ++V
Sbjct: 45 KIVIRGDRNVGKTCLWKRLQGLSFQEEYVATEEIQV 80
>AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical
protein Y54G2A.13 protein.
Length = 610
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -3
Query: 224 TSTPRVATYFFSNSPVKCLLTKVVLPVPPSPTNT 123
T+TP T+ N+ K KV P PP PT T
Sbjct: 135 TTTPLTTTFTLENATTK---EKVTTPTPPPPTTT 165
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 127 LVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPL 234
LVG +GKTTFV +G+F + + T+G + +
Sbjct: 25 LVGLQNSGKTTFVNVIASGQFTEDMIPTVGFNMRKI 60
>Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical
protein ZK593.4 protein.
Length = 1477
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 130 VGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVL 267
+ G TG+ + H+T + +LGV +H + H N G+FV+
Sbjct: 552 IAPGLTGRQRDLFHHMTTAANPHLLRSLGVPIHSV--HQNAGEFVI 595
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 127 LVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPL 234
LVG +GKTTFV +G+F + + T+G + +
Sbjct: 25 LVGLQNSGKTTFVNVIASGQFTEDMIPTVGFNMRKI 60
>Z71177-6|CAA94872.2| 1090|Caenorhabditis elegans Hypothetical
protein AC3.5 protein.
Length = 1090
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 325 FKDNXLSSCST*PLELRTKMYLTGIE 402
F N S CS P +LR K+Y G+E
Sbjct: 891 FSGNFSSDCSEVPGDLREKVYCNGVE 916
>AL110487-1|CAB54424.1| 610|Caenorhabditis elegans Hypothetical
protein Y39E4B.1 protein.
Length = 610
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 73 NSHKTTKMADDMPTFKCVLVGDGGTGKTTFVK 168
N H + D + V++G+ GTGKTT +K
Sbjct: 368 NFHLDVEAGDFSDSEIIVMLGENGTGKTTMIK 399
>Z77652-1|CAB01121.1| 254|Caenorhabditis elegans Hypothetical
protein C06B3.1 protein.
Length = 254
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/41 (21%), Positives = 23/41 (56%)
Frame = -3
Query: 491 IVFALTFLSLISTLFPHKXIGIPSHTRDQISMPVRYIFVRN 369
++FA + + F H + + +D++++PV +I++ N
Sbjct: 53 VIFAFLTVIMQPDFFSHSSVFLVIARKDRLNLPVSFIYIMN 93
>U97193-15|AAB52443.1| 1932|Caenorhabditis elegans Hypothetical
protein C06A5.1 protein.
Length = 1932
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +3
Query: 282 AGQEKFGGLRDGYYIQG---QXAIIMFDVTSRVTYKNVPNWHRDLVPCM*RYPYXLVRKQ 452
AG E GG G+Y + A +R+T K + RD +PC + + + RK
Sbjct: 1590 AGLESQGGTDTGFYFGRALLETACANPKSVTRITAKRLLELLRDRLPCQLKITFKIYRKY 1649
Query: 453 SGY 461
Y
Sbjct: 1650 LSY 1652
>U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like
protein.
Length = 69
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 222
FK +++GD G GK+ + + +F T+GVE
Sbjct: 12 FKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVE 47
>AL161712-21|CAC70129.2| 729|Caenorhabditis elegans Hypothetical
protein Y66D12A.5 protein.
Length = 729
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 516 ANSFPVENNSFRLNFSVFN 460
AN FP +NN F +F +FN
Sbjct: 338 ANEFPAKNNDFPSDFELFN 356
>Z81577-1|CAB04651.3| 289|Caenorhabditis elegans Hypothetical
protein R11.1 protein.
Length = 289
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -3
Query: 218 TPRVATYFFSNSPVKCLLTKVVLPVPPSPTNTHLNVGISSAIFV 87
TP+ AT FF+ K T +P+P + + L G++ AI +
Sbjct: 72 TPKRATKFFTFEQYKIAFTHSEIPLPVTMSFAGLFSGLTEAIVI 115
>U88180-6|AAB42300.1| 373|Caenorhabditis elegans Hypothetical
protein T27A3.7 protein.
Length = 373
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/17 (58%), Positives = 11/17 (64%), Gaps = 2/17 (11%)
Frame = -2
Query: 126 YTLECG--HIICHFRCF 82
YT EC H +CHF CF
Sbjct: 255 YTAECQKCHALCHFNCF 271
>L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical
protein C06E1.10 protein.
Length = 1148
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 175 LTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMXGTQPDKRSLV 303
+TG+ E K + T + +P+V+ T++ VL+ GT+ K V
Sbjct: 458 VTGQHEVKQLITKLKKRYPVVYETDKNGEVLVKGTKEWKEKKV 500
>AL117193-13|CAB55004.2| 478|Caenorhabditis elegans Hypothetical
protein Y105C5A.24 protein.
Length = 478
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 421 HIHGTKSLCQLGTFLYVTREVTSN 350
H H T +C GTF + + +TSN
Sbjct: 178 HHHRTLKICDFGTFTSIHQSMTSN 201
>AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical
protein Y39A1A.15c protein.
Length = 903
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 115 FKCVLVGDGGTGKTTFVKRHLTGEF 189
F+ +VG +GKT V R+LTG +
Sbjct: 31 FRIGIVGTSQSGKTALVHRYLTGTY 55
>AL031627-14|CAA20965.1| 234|Caenorhabditis elegans Hypothetical
protein Y102A5C.24 protein.
Length = 234
Score = 27.1 bits (57), Expect = 8.0
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -3
Query: 326 NIVSVSKTTKLLLSGCVPHIKTNWPRFVWNTRGCTSTPRVATYFFSNSPVKCL 168
+I S S TTKL++ I ++ +V+N + +P + FS +PV CL
Sbjct: 43 SIFSASNTTKLIIFSWTLTILPSFYLYVYNDCKYSWSPEFWLFAFSTTPV-CL 94
>AL031627-12|CAA20963.2| 305|Caenorhabditis elegans Hypothetical
protein Y102A5C.22 protein.
Length = 305
Score = 27.1 bits (57), Expect = 8.0
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -3
Query: 326 NIVSVSKTTKLLLSGCVPHIKTNWPRFVWNTRGCTSTPRVATYFFSNSPVKCL 168
+I S S TTKL++ I ++ +V+N + +P + FS +PV CL
Sbjct: 114 SIFSASNTTKLIIFSWTLTILPSFYLYVYNDCKYSWSPEFWLFAFSTTPV-CL 165
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,694,972
Number of Sequences: 27780
Number of extensions: 275450
Number of successful extensions: 1095
Number of sequences better than 10.0: 109
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1090
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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