Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20221
         (437 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   1.7  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    21   5.1  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   6.8  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   6.8  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   6.8  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   6.8  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   6.8  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 38  YFCREAVMRFGLRGGTAVIK 97
           Y+  E V  + +RG TAV+K
Sbjct: 124 YYEAEVVSEYVIRGNTAVLK 143


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 293 GFLHHAYFCREKVL 334
           GFL   Y CRE  L
Sbjct: 76  GFLKECYCCRESFL 89


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 78  PLKPKRITASRQK*AGWWYLP 16
           P +   +T  R +   WWYLP
Sbjct: 262 PARQIALTVPRYQ--AWWYLP 280


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 78  PLKPKRITASRQK*AGWWYLP 16
           P +   +T  R +   WWYLP
Sbjct: 262 PARQIALTVPRYQ--AWWYLP 280


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 78  PLKPKRITASRQK*AGWWYLP 16
           P +   +T  R +   WWYLP
Sbjct: 262 PARQIALTVPRYQ--AWWYLP 280


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 78  PLKPKRITASRQK*AGWWYLP 16
           P +   +T  R +   WWYLP
Sbjct: 262 PARQIALTVPRYQ--AWWYLP 280


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 78  PLKPKRITASRQK*AGWWYLP 16
           P +   +T  R +   WWYLP
Sbjct: 262 PARQIALTVPRYQ--AWWYLP 280


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,638
Number of Sequences: 336
Number of extensions: 1792
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9775509
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)