Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20220
         (490 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   1.5  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   2.6  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    21   4.5  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   6.0  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.9  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 439 IHSLFTVLITTESCHVDITTSQCNW 365
           +H++ TVL TT S   DIT  +  W
Sbjct: 388 LHTVKTVLKTTMSTFSDITFMRTVW 412


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -3

Query: 272 ITFAYTHILGALFTETC*STNYFK 201
           I F YT     +FT TC  TN  +
Sbjct: 169 INFGYTLAKFMIFTSTCIYTNLLR 192


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 11/44 (25%), Positives = 21/44 (47%)
 Frame = -1

Query: 457 KIMXAYIHSLFTVLITTESCHVDITTSQCNWGKNNKPKYLFLKY 326
           K+   YI  L+ VL    +  VD+  + C++   +K    F ++
Sbjct: 138 KLAARYIDFLYHVLSNENALDVDLIGNVCSYVVRDKLLKAFTRW 181


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 430 LFTVLITTESCHVDITT 380
           LF + +  E+C  DITT
Sbjct: 504 LFCINVLAEACGSDITT 520


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 255 TYFRCTFYRNVLI 217
           T F C FY+N LI
Sbjct: 93  TVFFCLFYQNKLI 105


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,720
Number of Sequences: 336
Number of extensions: 2374
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)