Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20218
(585 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z67734-1|CAA91527.2| 279|Caenorhabditis elegans Hypothetical pr... 46 1e-05
Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical pr... 45 3e-05
Z78415-6|CAH60758.1| 291|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical pr... 38 0.004
AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin f... 36 0.021
AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin f... 36 0.021
Z73971-4|CAA98254.1| 205|Caenorhabditis elegans Hypothetical pr... 35 0.037
AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical ... 34 0.085
Z73908-1|CAA98130.2| 230|Caenorhabditis elegans Hypothetical pr... 32 0.34
AL021487-1|CAA16352.4| 241|Caenorhabditis elegans Hypothetical ... 32 0.34
Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical pr... 31 0.80
U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin fam... 30 1.1
Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z81086-1|CAB03120.2| 258|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical p... 28 4.2
Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical p... 28 4.2
Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical pr... 28 4.2
U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein. 28 4.2
AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical ... 28 4.2
U53332-2|AAK31532.1| 473|Caenorhabditis elegans Tetraspanin fam... 28 5.6
DQ178635-1|ABD75714.1| 361|Caenorhabditis elegans tetraspanin f... 28 5.6
Z83220-4|CAC42264.1| 617|Caenorhabditis elegans Hypothetical pr... 27 7.4
U00055-11|AAN65307.1| 290|Caenorhabditis elegans Hypothetical p... 27 7.4
U00055-9|AAL06042.1| 309|Caenorhabditis elegans Hypothetical pr... 27 7.4
U00055-8|AAL06043.1| 311|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z83114-5|CAB05550.2| 485|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z72507-8|CAA96632.1| 1101|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z68319-5|CAA92703.1| 261|Caenorhabditis elegans Hypothetical pr... 27 9.8
AF348167-1|AAK37545.1| 485|Caenorhabditis elegans Pelle IRAK-li... 27 9.8
AC024859-3|AAK29969.2| 871|Caenorhabditis elegans Hypothetical ... 27 9.8
>Z67734-1|CAA91527.2| 279|Caenorhabditis elegans Hypothetical
protein B0198.1 protein.
Length = 279
Score = 46.4 bits (105), Expect = 1e-05
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 17/102 (16%)
Frame = +3
Query: 258 HTDLEDSVMRNL-NASITQYPVDKNVQKTIDIIQTDLQCCGINSPADW-----ADHGLP- 416
H E + +L N + Y +D N+ K ++ +Q D +CCG N+ DW DH LP
Sbjct: 121 HATYEQELNASLPNDILNNYNLDPNIAKAVNYLQRDSKCCGSNAFNDWPKPEVEDHYLPY 180
Query: 417 ----------IPSTCCSAQEINDGVVAACTENSTNFHSKGCL 512
IP +CC + G A +++ N +GCL
Sbjct: 181 AKTVVQRVQYIPDSCCKSTHQRKG--CALSDSPNNIFYRGCL 220
>Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical
protein T23D8.2 protein.
Length = 232
Score = 45.2 bits (102), Expect = 3e-05
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +1
Query: 151 CCGAVKENHCMIITFSVFLLIIFVAELAVGIAGY 252
CCGA++EN+C+ ++F+V L ++ E+A I GY
Sbjct: 71 CCGAIRENYCLTVSFAVLLALLITCEIAAVIIGY 104
Score = 35.5 bits (78), Expect = 0.028
Identities = 17/85 (20%), Positives = 31/85 (36%)
Frame = +3
Query: 258 HTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGINSPADWADHGLPIPSTCCS 437
H + L + +Y + V+ D +CCG+ + +DW IP +CC
Sbjct: 107 HDSFRLGIGNQLQTGMVRYHESRGVESAWDKTHQLFECCGVTNSSDWLTF-TTIPDSCCI 165
Query: 438 AQEINDGVVAACTENSTNFHSKGCL 512
+ + C + GC+
Sbjct: 166 EE------IEGCARENAPLFEPGCI 184
>Z78415-6|CAH60758.1| 291|Caenorhabditis elegans Hypothetical
protein C17G1.8 protein.
Length = 291
Score = 42.3 bits (95), Expect = 2e-04
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 15/132 (11%)
Frame = +3
Query: 228 TGCGHRWLHKHTDLEDSVMRNLN--ASITQYPVDKNVQKTIDIIQTDLQCCGINSPADWA 401
TG H+ K +L S++ N+N A +T+ + + T D +Q +LQCCG+++ DW
Sbjct: 98 TGSLHKEEAKE-NLRKSMLHNINTTAVVTKIGREIKLSLTWDHLQRELQCCGVDNYTDWH 156
Query: 402 -----DHGLPIPSTCCSAQEIN-DGVVAAC---TENSTNFHSKGC---LLNWLFT*RTLV 545
+ L P +CC Q + + C + + + KGC +WL+ LV
Sbjct: 157 YSVHWPNNLYTPDSCCDPQHFDAENGTENCGKLPDEQSLLYQKGCFPKFSDWLYHHIILV 216
Query: 546 -WCSPALESVSL 578
W + L V +
Sbjct: 217 NWVTSILFVVEI 228
>Z68880-6|CAA93092.1| 308|Caenorhabditis elegans Hypothetical
protein T14G10.6 protein.
Length = 308
Score = 38.3 bits (85), Expect = 0.004
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +3
Query: 264 DLEDSVMRNL-NASITQYPVDKNVQKTIDIIQTDLQCCGINSPADW-ADHGLPIPSTCCS 437
D D+ +RNL N + Y D ++Q ID +Q CCGIN DW + I + +
Sbjct: 140 DQLDNYIRNLLNDVVVGYRDDPDLQLLIDSMQETWMCCGINGADDWDRNTYFSIEAREVA 199
Query: 438 AQEINDGVVAACTENSTNFHSK 503
+ E GV +C NS+ K
Sbjct: 200 SPEAG-GVPFSCCINSSKLEFK 220
Score = 29.5 bits (63), Expect = 1.8
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +1
Query: 151 CCGAVKENHCMIITFSVFLLIIFVAELAVGIAGY 252
C G+++EN + +S L ++ +AE + G+ Y
Sbjct: 103 CVGSLRENTSFLTFYSTLLGLLLIAEFSAGVFAY 136
>AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin
family protein 14,isoform a protein.
Length = 427
Score = 35.9 bits (79), Expect = 0.021
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Frame = +3
Query: 258 HTDLEDSVMRN--LNASITQYPVDKNVQKTIDIIQTDLQCCGINSPAD-WADHGLPIPST 428
+TD + + N L ++ Y ++N+ + +D +Q +L+CCG++S A + D +
Sbjct: 128 YTDTTEGLSANWLLLYAVKNYHTNRNLAEIMDALQENLECCGVSSIAQGYRDWNMSYQFN 187
Query: 429 CCSA--QEINDGVVAACTENSTNFHSKG 506
C ++ Q GV +C S + G
Sbjct: 188 CTNSNPQPEKCGVPFSCCRKSVISEAAG 215
>AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin
family protein 14,isoform b protein.
Length = 451
Score = 35.9 bits (79), Expect = 0.021
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Frame = +3
Query: 258 HTDLEDSVMRN--LNASITQYPVDKNVQKTIDIIQTDLQCCGINSPAD-WADHGLPIPST 428
+TD + + N L ++ Y ++N+ + +D +Q +L+CCG++S A + D +
Sbjct: 152 YTDTTEGLSANWLLLYAVKNYHTNRNLAEIMDALQENLECCGVSSIAQGYRDWNMSYQFN 211
Query: 429 CCSA--QEINDGVVAACTENSTNFHSKG 506
C ++ Q GV +C S + G
Sbjct: 212 CTNSNPQPEKCGVPFSCCRKSVISEAAG 239
>Z73971-4|CAA98254.1| 205|Caenorhabditis elegans Hypothetical
protein C50H2.6 protein.
Length = 205
Score = 35.1 bits (77), Expect = 0.037
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 414 PIPSTCCSAQEINDGVVAACTENSTNFHSK 503
P+P+T CSA I++ V +C ST H+K
Sbjct: 96 PLPATFCSAASIDNNAVKSCKNKSTTLHAK 125
>AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical
protein Y39B6A.6 protein.
Length = 321
Score = 33.9 bits (74), Expect = 0.085
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +3
Query: 234 CGHRWLHKHTDLEDSVMRNLNASITQYPVDKNV-QKTIDIIQTDLQCCGINSPADWADHG 410
CG L+K L+ + LN + Y V Q+++D +QT +CCG +D+
Sbjct: 160 CGIYLLYKKDGLDVELSDALNYMVQHYYQGPGVVQESLDHLQTAFRCCGNAGCSDFRVFR 219
Query: 411 LPIPSTC 431
IP +C
Sbjct: 220 QDIPRSC 226
>Z73908-1|CAA98130.2| 230|Caenorhabditis elegans Hypothetical
protein F53B2.2 protein.
Length = 230
Score = 31.9 bits (69), Expect = 0.34
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 303 ITQYPVDKNVQKTIDIIQTDLQCCGINSPADWADHGLPIPSTC 431
+ Y + + T+D + T L+CCG N D+ G P++C
Sbjct: 124 VANYHNNSRTKNTLDWVHTSLKCCGANGCEDFLPAG-NFPTSC 165
>AL021487-1|CAA16352.4| 241|Caenorhabditis elegans Hypothetical
protein Y45F10B.1 protein.
Length = 241
Score = 31.9 bits (69), Expect = 0.34
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 303 ITQYPVDKNVQKTIDIIQTDLQCCGINSPADWADHGLPIPSTC 431
+ Y + + T+D + T L+CCG N D+ G P++C
Sbjct: 135 VANYHNNSRTKNTLDWVHTSLKCCGANGCEDFLPAG-NFPTSC 176
>Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 30.7 bits (66), Expect = 0.80
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 258 HTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGIN-SPADWADHGLPIPS 425
HT+ S MR S + D+NV TI I+ ++ SP+ W + G+P+ S
Sbjct: 515 HTETPRSSMRFKENSSSVGSGDQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSS 571
>Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 30.7 bits (66), Expect = 0.80
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 258 HTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGIN-SPADWADHGLPIPS 425
HT+ S MR S + D+NV TI I+ ++ SP+ W + G+P+ S
Sbjct: 515 HTETPRSSMRFKENSSSVGSGDQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSS 571
>U41545-5|AAK39137.2| 243|Caenorhabditis elegans Tetraspanin family
protein 17 protein.
Length = 243
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 154 CGAVKENHCMIITFSVFLLIIFVAELAVG 240
CGAV + +++ F +FL+ F+A++A+G
Sbjct: 46 CGAVNRSRFLLLAFVMFLIGTFLADVAMG 74
Score = 28.3 bits (60), Expect = 4.2
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +3
Query: 279 VMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGINSPADWADHGLPIPSTCCSAQEINDG 458
++++ +T P +K V + ID +Q +CCG P D+ ST ++EI
Sbjct: 94 IVKSKYGVMTSEPENKMVTEFIDKLQFYEKCCGSLGPTDYISSRWS-QSTNQDSEEIESP 152
Query: 459 V--VAACTE 479
+ V+ CT+
Sbjct: 153 LFPVSCCTQ 161
>Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical
protein F33C8.3 protein.
Length = 282
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/50 (24%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 252 HKHTDLEDSVMRNLNASI-TQYPVDKNVQKTIDIIQTDLQCCGINSPADW 398
HK ++ V ++ +I +Y + + D +Q +CCG+ + DW
Sbjct: 109 HKQEHIKHYVESSMYDTIRNRYSSETAFKDAFDTVQEKFECCGVKTYTDW 158
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 151 CCGAVKENHCMIITFSVFLLIIFVAELAVGI 243
C GA K N C + F L++ F ELA +
Sbjct: 75 CIGAWKMNQCALAFFCCILILAFFLELAAAV 105
>Z81086-1|CAB03120.2| 258|Caenorhabditis elegans Hypothetical
protein F53B6.1 protein.
Length = 258
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 12/54 (22%)
Frame = +3
Query: 324 KNVQKTIDIIQTDLQCCGIN--------SPADWADH----GLPIPSTCCSAQEI 449
K + ++ D +Q++ +CCG+N + W H L IP +CC EI
Sbjct: 142 KGITESWDALQSNFKCCGVNGTDNAQIWKTSKWYMHQRAPKLLIPESCCIPSEI 195
>Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 28.3 bits (60), Expect = 4.2
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 258 HTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGIN-SPADWADHGLPIPS 425
HT+ S M N ++S+ D+NV TI I+ ++ SP+ W + G+P+ S
Sbjct: 515 HTETPRSSMEN-SSSVGSG--DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSS 568
>Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 28.3 bits (60), Expect = 4.2
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 258 HTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGIN-SPADWADHGLPIPS 425
HT+ S M N ++S+ D+NV TI I+ ++ SP+ W + G+P+ S
Sbjct: 515 HTETPRSSMEN-SSSVGSG--DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSS 568
>Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 28.3 bits (60), Expect = 4.2
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 258 HTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGIN-SPADWADHGLPIPS 425
HT+ S M N ++S+ D+NV TI I+ ++ SP+ W + G+P+ S
Sbjct: 515 HTETPRSSMEN-SSSVGSG--DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSS 568
>Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 28.3 bits (60), Expect = 4.2
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 258 HTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGIN-SPADWADHGLPIPS 425
HT+ S M N ++S+ D+NV TI I+ ++ SP+ W + G+P+ S
Sbjct: 515 HTETPRSSMEN-SSSVGSG--DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSS 568
>Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 28.3 bits (60), Expect = 4.2
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 258 HTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGIN-SPADWADHGLPIPS 425
HT+ S M N ++S+ D+NV TI I+ ++ SP+ W + G+P+ S
Sbjct: 515 HTETPRSSMEN-SSSVGSG--DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSS 568
>Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 28.3 bits (60), Expect = 4.2
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 258 HTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGIN-SPADWADHGLPIPS 425
HT+ S M N ++S+ D+NV TI I+ ++ SP+ W + G+P+ S
Sbjct: 515 HTETPRSSMEN-SSSVGSG--DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSS 568
>U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.
Length = 1016
Score = 28.3 bits (60), Expect = 4.2
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 258 HTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGIN-SPADWADHGLPIPS 425
HT+ S M N ++S+ D+NV TI I+ ++ SP+ W + G+P+ S
Sbjct: 515 HTETPRSSMEN-SSSVGSG--DQNVSATIPIVPLSAPPKAVHQSPSSWINRGVPLSS 568
>AL110487-3|CAB54426.1| 223|Caenorhabditis elegans Hypothetical
protein Y39E4B.4 protein.
Length = 223
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = +1
Query: 157 GAVKENHCMIITFSVFLLIIFVAELAVGIAGYISIRT 267
GAV + ++ + +F++I+F+ E+A+GI + R+
Sbjct: 91 GAVIRSKYLLAPYFLFMVILFLLEIAIGITVLVKRRS 127
>U53332-2|AAK31532.1| 473|Caenorhabditis elegans Tetraspanin family
protein 18 protein.
Length = 473
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +3
Query: 291 LNASITQYPVDKNVQKTIDIIQTDLQCCGINSPADWAD 404
L + Y ++ +D I + CCG+NS D+ D
Sbjct: 137 LMTNYLNYNESMESRRLVDRIHIEYSCCGVNSIEDFVD 174
>DQ178635-1|ABD75714.1| 361|Caenorhabditis elegans tetraspanin
family protein protein.
Length = 361
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +3
Query: 291 LNASITQYPVDKNVQKTIDIIQTDLQCCGINSPADWAD 404
L + Y ++ +D I + CCG+NS D+ D
Sbjct: 25 LMTNYLNYNESMESRRLVDRIHIEYSCCGVNSIEDFVD 62
>Z83220-4|CAC42264.1| 617|Caenorhabditis elegans Hypothetical
protein C34B7.4 protein.
Length = 617
Score = 27.5 bits (58), Expect = 7.4
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 411 LPIPSTCCSAQEINDGVVAACTENSTNFHSKGCL 512
LP+ S C Q+ +D + C+E +H + CL
Sbjct: 90 LPVCSFCKEDQKADDEPLKECSECKAKYHIRKCL 123
>U00055-11|AAN65307.1| 290|Caenorhabditis elegans Hypothetical
protein R02F2.1d protein.
Length = 290
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +3
Query: 309 QYPVDKNVQKTIDIIQTDLQCCGINSPADWADHGLPIPSTCCSAQEIND 455
QYP++ + + I +++ C + W+ H LP+PST +++D
Sbjct: 200 QYPINA-LARLCKIPMSEVNRCRVKVSNLWSRHVLPMPSTFHLLADLDD 247
>U00055-9|AAL06042.1| 309|Caenorhabditis elegans Hypothetical
protein R02F2.1a protein.
Length = 309
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +3
Query: 309 QYPVDKNVQKTIDIIQTDLQCCGINSPADWADHGLPIPSTCCSAQEIND 455
QYP++ + + I +++ C + W+ H LP+PST +++D
Sbjct: 219 QYPINA-LARLCKIPMSEVNRCRVKVSNLWSRHVLPMPSTFHLLADLDD 266
>U00055-8|AAL06043.1| 311|Caenorhabditis elegans Hypothetical
protein R02F2.1b protein.
Length = 311
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +3
Query: 309 QYPVDKNVQKTIDIIQTDLQCCGINSPADWADHGLPIPSTCCSAQEIND 455
QYP++ + + I +++ C + W+ H LP+PST +++D
Sbjct: 221 QYPINA-LARLCKIPMSEVNRCRVKVSNLWSRHVLPMPSTFHLLADLDD 268
>Z83114-5|CAB05550.2| 485|Caenorhabditis elegans Hypothetical
protein K09B11.1 protein.
Length = 485
Score = 27.1 bits (57), Expect = 9.8
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -2
Query: 440 GGAARARYGQTVIGPVGRTVYTAALQVCLYDINSLLDVLVYRILSNGSVQ 291
G R R T + + R + L + Y + LVY+ +SNGS++
Sbjct: 226 GSRERLRQSLTELRTLARFRHDNILPIYAYSLEGSEPCLVYQFMSNGSLE 275
>Z72507-8|CAA96632.1| 1101|Caenorhabditis elegans Hypothetical
protein F17C11.10 protein.
Length = 1101
Score = 27.1 bits (57), Expect = 9.8
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +2
Query: 293 ERFHYSISGRQERPEDY*YHTNRLAMLRYKQSGRLGRSRSAHTEHVLLRPG 445
E H+ +G R + +L + Y G+L SA+T HVL PG
Sbjct: 658 ENRHHGSTGAVSRIDVPIETGEQLDWIAYSNQGKLAVMDSAYTVHVLSAPG 708
>Z68319-5|CAA92703.1| 261|Caenorhabditis elegans Hypothetical
protein T23G7.5a protein.
Length = 261
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +3
Query: 321 DKNVQKTIDIIQTDLQCCGINSPADWADHGLPIPSTCCSAQEIND 455
+K + ID+ TD +WADHG+ C E+N+
Sbjct: 108 NKQIGLVIDLTNTDRYY----KKTEWADHGVKYLKLNCPGHEVNE 148
>AF348167-1|AAK37545.1| 485|Caenorhabditis elegans Pelle IRAK-like
kinase 1 protein.
Length = 485
Score = 27.1 bits (57), Expect = 9.8
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -2
Query: 440 GGAARARYGQTVIGPVGRTVYTAALQVCLYDINSLLDVLVYRILSNGSVQ 291
G R R T + + R + L + Y + LVY+ +SNGS++
Sbjct: 226 GSRERLRQSLTELRTLARFRHDNILPIYAYSLEGSEPCLVYQFMSNGSLE 275
>AC024859-3|AAK29969.2| 871|Caenorhabditis elegans Hypothetical
protein Y71H2AM.10 protein.
Length = 871
Score = 27.1 bits (57), Expect = 9.8
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = +3
Query: 237 GHRWLHKHTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTDLQCCGIN 383
G +L++H D + S + + + +PVD+N + + T + C N
Sbjct: 74 GKCYLNRHEDQKSSCVIRIPVPFSWFPVDQNRTSVLSVSYTVSEKCDQN 122
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,277,826
Number of Sequences: 27780
Number of extensions: 248270
Number of successful extensions: 805
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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