Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20214
         (482 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex det...    21   9.1  
DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex det...    21   9.1  
DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex det...    21   9.1  
DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex det...    21   9.1  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    21   9.1  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    21   9.1  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    21   9.1  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    21   9.1  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   9.1  

>DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +3

Query: 228 PPTYYPTQAPVTIHPSHTPKN 290
           PPT +P   P   +  H P N
Sbjct: 147 PPTPFPRFIPPNAYRFHPPLN 167


>DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +3

Query: 228 PPTYYPTQAPVTIHPSHTPKN 290
           PPT +P   P   +  H P N
Sbjct: 147 PPTPFPRFIPPNAYRFHPPLN 167


>DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +3

Query: 228 PPTYYPTQAPVTIHPSHTPKN 290
           PPT +P   P   +  H P N
Sbjct: 147 PPTPFPRFIPPNAYRFHPPLN 167


>DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +3

Query: 228 PPTYYPTQAPVTIHPSHTPKN 290
           PPT +P   P   +  H P N
Sbjct: 147 PPTPFPRFIPPNAYRFHPPLN 167


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +3

Query: 228 PPTYYPTQAPVTIHPSHTPKN 290
           PPT +P   P   +  H P N
Sbjct: 151 PPTPFPRFIPPNAYRFHPPLN 171


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +3

Query: 228 PPTYYPTQAPVTIHPSHTPKN 290
           PPT +P   P   +  H P N
Sbjct: 156 PPTPFPRFIPPNAYRFHPPLN 176


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +3

Query: 228 PPTYYPTQAPVTIHPSHTPKN 290
           PPT +P   P   +  H P N
Sbjct: 156 PPTPFPRFIPPNAYRFHPPLN 176


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +3

Query: 228 PPTYYPTQAPVTIHPSHTPKN 290
           PPT +P   P   +  H P N
Sbjct: 156 PPTPFPRFIPPNAYRFHPPLN 176


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 290 VLGGMTGMDSDWSLGRVVGR 231
           V+GG+TG+    +LGR + R
Sbjct: 207 VVGGLTGLIGCLTLGRRILR 226


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,384
Number of Sequences: 438
Number of extensions: 1402
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13174803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)