Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20212
         (378 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    24   0.58 
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   0.77 
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   1.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   1.8  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   4.1  
AY819656-1|AAV70656.1|   56|Tribolium castaneum elongation facto...    21   5.4  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    20   9.5  

>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 23.8 bits (49), Expect = 0.58
 Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = +2

Query: 152 LLTGL-PKWRQRRRLKDPTYPSTVL 223
           LLT   PKW+ RR++  P +   +L
Sbjct: 115 LLTSAGPKWQNRRKILTPAFHFNIL 139


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 23.4 bits (48), Expect = 0.77
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 167 PKWRQRRRLKDPTYPSTVL 223
           PKW+ RR++  P +   +L
Sbjct: 121 PKWQNRRKILTPAFHFNIL 139


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +2

Query: 158 TGLPKWRQRRRLKDPTYPSTVL 223
           TGL KW+ RR++  P +  ++L
Sbjct: 126 TGL-KWQTRRKILTPAFHFSIL 146


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +2

Query: 158 TGLPKWRQRRRLKDPTYPSTVL 223
           TGL KW+ RR++  P +  ++L
Sbjct: 126 TGL-KWQTRRKILTPAFHFSIL 146


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 202 YVSIHSSGFRDFL 240
           YV +HSS   DFL
Sbjct: 695 YVGVHSSELLDFL 707


>AY819656-1|AAV70656.1|   56|Tribolium castaneum elongation factor
           1-alpha protein.
          Length = 56

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 294 EVQHECIPQAVLG 332
           E+ HE +P+AV G
Sbjct: 44  EMHHEALPEAVPG 56


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 140 QINRLLTGLPKWRQRRRLKD 199
           Q+N   + +  W Q RR+KD
Sbjct: 107 QLNLPESTIKVWFQNRRMKD 126


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,907
Number of Sequences: 336
Number of extensions: 1247
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7803226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)