Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20212
(378 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0295 + 20537147-20537291,20539111-20539283,20539365-205395... 62 1e-10
01_05_0296 + 20567259-20567386,20568895-20569123,20569205-205694... 60 8e-10
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 48 2e-06
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 48 2e-06
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 48 2e-06
07_03_1392 - 26238885-26239007,26239137-26239235,26239636-262397... 38 0.002
06_03_0337 + 19678152-19678484,19678616-19678801,19679232-196794... 38 0.002
03_05_0052 - 20293197-20293310,20293938-20294024,20294133-202942... 38 0.002
01_06_0020 + 25630728-25631023,25631308-25631548,25631629-256317... 38 0.002
01_05_0721 + 24594815-24594834,24595207-24595313,24595417-245954... 38 0.003
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 37 0.005
06_03_1284 - 28988287-28988922,28989335-28989765,28989850-289899... 37 0.005
02_01_0355 + 2558792-2558862,2558993-2559099,2559185-2559615,256... 37 0.005
01_05_0722 + 24598426-24598649,24599113-24599219,24599319-245993... 37 0.006
07_03_0601 - 19872780-19873099,19873148-19873151,19874196-198743... 36 0.008
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 36 0.008
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 36 0.014
02_05_1293 - 35520733-35520963,35521696-35521878,35522040-355222... 35 0.024
05_01_0079 + 531617-531734,531987-532059,532152-532261,532400-53... 34 0.032
03_05_0997 + 29565311-29565664,29566134-29566298,29566572-295666... 33 0.075
01_07_0333 - 42813789-42814073,42814229-42814315,42815083-428151... 33 0.075
09_03_0167 + 12965030-12965356,12966100-12966387,12966704-129668... 33 0.099
08_01_0397 - 3509186-3510291,3510322-3512335 33 0.099
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 33 0.099
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 32 0.13
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 31 0.30
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 31 0.30
06_03_1515 - 30707600-30707613,30708093-30708167,30708596-307086... 31 0.40
01_06_1636 - 38800814-38800918,38801024-38801169,38801276-388013... 31 0.40
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 30 0.53
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 30 0.69
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 29 1.2
03_06_0344 - 33276366-33276548,33277044-33277169,33277254-332773... 29 1.2
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 28 2.8
01_01_0602 - 4484972-4485450,4485949-4485997,4486108-4486237,448... 27 6.5
>01_05_0295 +
20537147-20537291,20539111-20539283,20539365-20539596,
20539743-20539861,20540480-20540536,20540615-20540799,
20542252-20542396,20542463-20542546,20542634-20542697,
20542799-20542809
Length = 404
Score = 62.5 bits (145), Expect = 1e-10
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = +3
Query: 288 PSEVQHECIPQAVLGMDILCQAKSGMGKTA 377
P +VQHECIPQA+LGMD++CQAKSGMGKTA
Sbjct: 46 PPKVQHECIPQAILGMDVICQAKSGMGKTA 75
>01_05_0296 +
20567259-20567386,20568895-20569123,20569205-20569436,
20569583-20569701,20570321-20570377,20570455-20570639,
20571416-20571560,20571630-20571713,20571798-20571861,
20571889-20571932
Length = 428
Score = 59.7 bits (138), Expect = 8e-10
Identities = 24/27 (88%), Positives = 27/27 (100%)
Frame = +3
Query: 297 VQHECIPQAVLGMDILCQAKSGMGKTA 377
VQHECIPQA+LGMD++CQAKSGMGKTA
Sbjct: 62 VQHECIPQAILGMDVICQAKSGMGKTA 88
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 48.4 bits (110), Expect = 2e-06
Identities = 22/38 (57%), Positives = 27/38 (71%)
Frame = +3
Query: 264 IVDXGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 377
I + GFE PS +Q E IP A+ G DIL +AK+G GKTA
Sbjct: 162 IYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTA 199
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 48.4 bits (110), Expect = 2e-06
Identities = 22/38 (57%), Positives = 27/38 (71%)
Frame = +3
Query: 264 IVDXGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 377
I + GFE PS +Q E IP A+ G DIL +AK+G GKTA
Sbjct: 139 IYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTA 176
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 48.4 bits (110), Expect = 2e-06
Identities = 22/38 (57%), Positives = 27/38 (71%)
Frame = +3
Query: 264 IVDXGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 377
I + GFE PS +Q E IP A+ G DIL +AK+G GKTA
Sbjct: 149 IYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTA 186
>07_03_1392 -
26238885-26239007,26239137-26239235,26239636-26239720,
26239825-26240028,26240360-26240682,26241904-26242575
Length = 501
Score = 38.3 bits (85), Expect = 0.002
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 276 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 377
G P+ VQ CIP+A+ G D+L A++G GKTA
Sbjct: 96 GMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTA 129
>06_03_0337 +
19678152-19678484,19678616-19678801,19679232-19679417,
19680840-19680926,19681045-19681086,19681164-19681253,
19681399-19681503,19681797-19681835,19681914-19682018,
19682463-19682531,19682587-19682736,19683156-19683335
Length = 523
Score = 38.3 bits (85), Expect = 0.002
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 264 IVDXGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 374
I D + H +E+Q IP +LG D++ AK+G GKT
Sbjct: 101 IRDMNYTHLTEIQARSIPPLMLGSDVMASAKTGSGKT 137
>03_05_0052 -
20293197-20293310,20293938-20294024,20294133-20294270,
20295009-20295128,20295236-20295343,20296053-20296133,
20296216-20296456,20297010-20297305
Length = 394
Score = 38.3 bits (85), Expect = 0.002
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 276 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 377
GFE PS +Q + + G D++ QA+SG GKT+
Sbjct: 50 GFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTS 83
>01_06_0020 +
25630728-25631023,25631308-25631548,25631629-25631709,
25632109-25632216,25632329-25632448,25632806-25632943,
25633064-25633150,25633802-25633915
Length = 394
Score = 38.3 bits (85), Expect = 0.002
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 276 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 377
GFE PS +Q + + G D++ QA+SG GKT+
Sbjct: 50 GFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTS 83
>01_05_0721 +
24594815-24594834,24595207-24595313,24595417-24595472,
24595562-24595810,24595871-24596077,24596157-24596243,
24596331-24596426,24596500-24596715,24596908-24597090,
24597222-24597449
Length = 482
Score = 37.5 bits (83), Expect = 0.003
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +3
Query: 264 IVDXGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 374
+ D G+E ++VQ +P + G D+L +AK+G GKT
Sbjct: 21 VKDAGYERMTQVQEATLPVILQGKDVLAKAKTGTGKT 57
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 37.1 bits (82), Expect = 0.005
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 276 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 377
G++ P+ +Q CIP A+ G DI A +G GKTA
Sbjct: 213 GYQKPTPIQAACIPLALTGRDICGSAITGSGKTA 246
>06_03_1284 -
28988287-28988922,28989335-28989765,28989850-28989956,
28990066-28990136
Length = 414
Score = 37.1 bits (82), Expect = 0.005
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +3
Query: 276 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 377
GFE PS +Q I G+D++ QA+SG GKTA
Sbjct: 60 GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 93
>02_01_0355 +
2558792-2558862,2558993-2559099,2559185-2559615,
2560100-2560735
Length = 414
Score = 37.1 bits (82), Expect = 0.005
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +3
Query: 276 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 377
GFE PS +Q I G+D++ QA+SG GKTA
Sbjct: 60 GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 93
>01_05_0722 +
24598426-24598649,24599113-24599219,24599319-24599374,
24599469-24599675,24599757-24599963,24600037-24600123,
24600167-24600208,24600209-24600304,24600406-24600621,
24600693-24600875,24601014-24601241
Length = 550
Score = 36.7 bits (81), Expect = 0.006
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 264 IVDXGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 374
I D G+E ++VQ +P + G D+L +AK+G GKT
Sbjct: 89 IKDAGYEKMTQVQEATLPIILQGEDVLAKAKTGTGKT 125
>07_03_0601 -
19872780-19873099,19873148-19873151,19874196-19874357,
19874429-19874617,19874687-19875010,19875103-19875378,
19875436-19875478,19876110-19876188,19876473-19876555,
19876708-19876782,19877324-19877490,19877960-19878370
Length = 710
Score = 36.3 bits (80), Expect = 0.008
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 276 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 374
G+ SE+Q +P A+ G D+L AK+G GKT
Sbjct: 99 GYTEMSEIQRAALPHALCGRDVLGAAKTGSGKT 131
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 36.3 bits (80), Expect = 0.008
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 264 IVDXGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 377
I G+E P+ +Q + +P + G DI+ AK+G GKTA
Sbjct: 234 IAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTA 271
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 35.5 bits (78), Expect = 0.014
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 276 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 377
G+E P+ VQ +P A+ G D++ A++G GKTA
Sbjct: 103 GYESPTPVQRYSMPIALAGRDLMACAQTGSGKTA 136
>02_05_1293 -
35520733-35520963,35521696-35521878,35522040-35522255,
35522936-35523022,35523125-35523331,35523426-35523650,
35523743-35523798,35524009-35524115,35524443-35525470
Length = 779
Score = 34.7 bits (76), Expect = 0.024
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 264 IVDXGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 377
+ D G+ + VQ +P + G D+L +AK+G GK+A
Sbjct: 357 LTDAGYVQTTVVQETALPMCLEGKDVLVKAKTGTGKSA 394
>05_01_0079 +
531617-531734,531987-532059,532152-532261,532400-532543,
532628-532736,532836-533182,533260-533333,533478-533782,
534168-534294,534385-534414,534589-534837
Length = 561
Score = 34.3 bits (75), Expect = 0.032
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 276 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 374
GF+ P+ +Q + IP A+ G +L +A +G GKT
Sbjct: 43 GFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKT 75
>03_05_0997 +
29565311-29565664,29566134-29566298,29566572-29566661,
29566763-29566891,29568141-29568272,29568904-29568969,
29569326-29569505,29569664-29569693,29569744-29569839,
29569959-29570096,29571060-29571142,29571447-29571484,
29571568-29571788,29572491-29572538
Length = 589
Score = 33.1 bits (72), Expect = 0.075
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 276 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 374
G + + +Q E IP + G D++ +AK+G GKT
Sbjct: 102 GLDKATPIQREAIPLILEGKDVVAKAKTGSGKT 134
>01_07_0333 -
42813789-42814073,42814229-42814315,42815083-42815172,
42815555-42815623,42815859-42815888,42816060-42816164,
42816454-42816549,42816647-42816760,42816862-42816955,
42817027-42817190
Length = 377
Score = 33.1 bits (72), Expect = 0.075
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 270 DXGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 374
+ G+ P+EVQ + +P + G D + A++G GKT
Sbjct: 58 EVGYVVPTEVQEQSLPVLLSGQDCILHAQTGSGKT 92
>09_03_0167 +
12965030-12965356,12966100-12966387,12966704-12966826,
12967229-12967611,12967863-12968190,12968324-12968353,
12968837-12968989,12969510-12969815
Length = 645
Score = 32.7 bits (71), Expect = 0.099
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 276 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 374
G PS VQ CIP + D++ A++G GKT
Sbjct: 101 GLARPSLVQAACIPHVLTTNDVIVAAETGSGKT 133
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 32.7 bits (71), Expect = 0.099
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 276 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 374
GFE P +Q + +P + G D + AK+G GKT
Sbjct: 443 GFEKPMSIQAQALPIIMSGRDCIGIAKTGSGKT 475
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 32.7 bits (71), Expect = 0.099
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 276 GFEHPSEVQHECIPQAV-LGMDILCQAKSGMGKT 374
GF+ P+ +Q C P A G D++ A++G GKT
Sbjct: 161 GFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKT 194
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 32.3 bits (70), Expect = 0.13
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 276 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 374
GFE P +Q + +P + G D + AK+G GKT
Sbjct: 304 GFEKPMPIQAQALPIIMSGRDCIGIAKTGSGKT 336
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 31.1 bits (67), Expect = 0.30
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 276 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 374
GF +P+ +Q + P A+ DI+ AK+G GKT
Sbjct: 623 GFLNPTPIQAQTWPVALQNRDIVAIAKTGSGKT 655
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 31.1 bits (67), Expect = 0.30
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 276 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 374
GF P+ +Q + P A+ DI+ AK+G GKT
Sbjct: 199 GFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKT 231
>06_03_1515 -
30707600-30707613,30708093-30708167,30708596-30708647,
30708751-30708831,30709145-30709219,30709870-30709977,
30710026-30710032,30710133-30710268,30710361-30710685
Length = 290
Score = 30.7 bits (66), Expect = 0.40
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +3
Query: 291 SEVQHECIPQAVLGMDILCQAKSG 362
S+++H C+PQ VLG D+ C+ ++G
Sbjct: 217 SDIEHGCLPQVVLG-DVPCKFRNG 239
>01_06_1636 -
38800814-38800918,38801024-38801169,38801276-38801381,
38801609-38801686,38801786-38801839,38801920-38801992,
38802059-38802183,38802268-38802357,38802447-38802526,
38802869-38802995,38803145-38803227,38803575-38803710
Length = 400
Score = 30.7 bits (66), Expect = 0.40
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 288 PSEVQHECIPQAVLGMDILCQAKSGMGK 371
P EV +C+P A + +DILC ++ GK
Sbjct: 197 PKEVSAKCLPDAGIFLDILCSSEDLSGK 224
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 30.3 bits (65), Expect = 0.53
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 276 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 374
GF+ P+ +Q + IP + G + A +G GKT
Sbjct: 165 GFQEPTPIQRQAIPILLSGRECFACAPTGSGKT 197
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 29.9 bits (64), Expect = 0.69
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 276 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 374
GF P+ +Q + P A+ D++ AK+G GKT
Sbjct: 169 GFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKT 201
>07_02_0023 -
11918735-11918827,11919139-11919231,11919320-11919484,
11920234-11920327,11921012-11921136,11921228-11921313,
11921786-11921864,11923777-11923857,11924153-11924260,
11924870-11924994,11925110-11925530
Length = 489
Score = 29.1 bits (62), Expect = 1.2
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 276 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 374
GFE PS +Q P + G D + A +G GKT
Sbjct: 111 GFERPSPIQAYAWPYLLDGRDFIGIAATGSGKT 143
>03_06_0344 -
33276366-33276548,33277044-33277169,33277254-33277322,
33277401-33277505,33277595-33277633,33277717-33278016,
33278093-33278182,33278271-33278312,33278433-33278516,
33278762-33278947,33279218-33279403,33279663-33280025
Length = 590
Score = 29.1 bits (62), Expect = 1.2
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 264 IVDXGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 374
I + + + +++Q IP + G D++ AK+G GKT
Sbjct: 111 IREMNYTYLTQIQARSIPHLLNGKDVMGAAKTGSGKT 147
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 27.9 bits (59), Expect = 2.8
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +2
Query: 116 STTKMKNKQINRLLTGLPKWRQRRRLKDPTYPSTVLVL 229
ST +++ R G+P +RQ R+ DP + +L
Sbjct: 492 STPAAPPREVGRKAAGVPSFRQEERVLDPKKAQNIAIL 529
>01_01_0602 -
4484972-4485450,4485949-4485997,4486108-4486237,
4486636-4486778,4486819-4486877,4487167-4487200,
4487489-4487629,4487719-4487907,4488027-4488122,
4488163-4488225,4488588-4489097
Length = 630
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +3
Query: 270 DXGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 374
+ G P+E+Q +P + G ++ + +G GKT
Sbjct: 127 EMGISKPTEIQCVGVPAVLAGTSVVLGSHTGSGKT 161
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,514,498
Number of Sequences: 37544
Number of extensions: 126807
Number of successful extensions: 292
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 292
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 612769692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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