Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20212
(378 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 78 2e-15
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 78 2e-15
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 78 2e-15
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 42 2e-04
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 42 2e-04
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 41 3e-04
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 40 4e-04
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 40 6e-04
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 40 6e-04
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 39 0.001
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 38 0.002
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 36 0.007
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 34 0.029
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 34 0.029
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 34 0.029
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 33 0.051
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 33 0.068
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 32 0.16
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 31 0.21
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 31 0.27
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 31 0.36
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 30 0.48
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 30 0.48
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 30 0.63
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 29 1.1
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 29 1.1
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 29 1.5
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 29 1.5
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 29 1.5
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 29 1.5
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 27 3.4
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 27 4.5
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 27 4.5
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 27 4.5
U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical p... 27 5.9
U80815-9|AAV34785.1| 361|Caenorhabditis elegans Hypothetical pr... 27 5.9
U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical pr... 27 5.9
U80815-7|AAO91677.1| 473|Caenorhabditis elegans Hypothetical pr... 27 5.9
U80815-6|AAO91675.1| 464|Caenorhabditis elegans Hypothetical pr... 27 5.9
U80815-5|AAO91676.1| 439|Caenorhabditis elegans Hypothetical pr... 27 5.9
U80815-4|AAO91674.1| 524|Caenorhabditis elegans Hypothetical pr... 27 5.9
U80815-3|AAK73899.1| 499|Caenorhabditis elegans Hypothetical pr... 27 5.9
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 78.2 bits (184), Expect = 2e-15
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +3
Query: 264 IVDXGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 377
I D GFEHPSEVQHECIPQA+LGMD++CQAKSGMGKTA
Sbjct: 56 IGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTA 93
Score = 44.4 bits (100), Expect = 3e-05
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1
Query: 184 KEVKGSYVSIHSSGFRDFLLKPE 252
++ KG+Y SIHSSGFRDFLLKPE
Sbjct: 29 RKTKGTYASIHSSGFRDFLLKPE 51
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 78.2 bits (184), Expect = 2e-15
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +3
Query: 264 IVDXGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 377
I D GFEHPSEVQHECIPQA+LGMD++CQAKSGMGKTA
Sbjct: 56 IGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTA 93
Score = 44.4 bits (100), Expect = 3e-05
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1
Query: 184 KEVKGSYVSIHSSGFRDFLLKPE 252
++ KG+Y SIHSSGFRDFLLKPE
Sbjct: 29 RKTKGTYASIHSSGFRDFLLKPE 51
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 78.2 bits (184), Expect = 2e-15
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +3
Query: 264 IVDXGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 377
I D GFEHPSEVQHECIPQA+LGMD++CQAKSGMGKTA
Sbjct: 55 IGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTA 92
Score = 44.4 bits (100), Expect = 3e-05
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1
Query: 184 KEVKGSYVSIHSSGFRDFLLKPE 252
++ KG+Y SIHSSGFRDFLLKPE
Sbjct: 28 RKTKGTYASIHSSGFRDFLLKPE 50
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 41.5 bits (93), Expect = 2e-04
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = +3
Query: 279 FEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 374
F+ PS VQ IP +LG D+L QAKSG GKT
Sbjct: 42 FDRPSPVQARAIPVGLLGRDMLVQAKSGTGKT 73
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 41.5 bits (93), Expect = 2e-04
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = +3
Query: 279 FEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 374
F+ PS VQ IP +LG D+L QAKSG GKT
Sbjct: 42 FDRPSPVQARAIPVGLLGRDMLVQAKSGTGKT 73
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 40.7 bits (91), Expect = 3e-04
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +3
Query: 276 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 377
GFE PS +Q IP + D++ QA+SG GKTA
Sbjct: 45 GFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTA 78
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 40.3 bits (90), Expect = 4e-04
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 276 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 377
GFE PS +Q +P + D++ QA+SG GKTA
Sbjct: 45 GFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTA 78
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 39.9 bits (89), Expect = 6e-04
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 264 IVDXGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 377
I GFE PS +Q I G D++ QA+SG GKTA
Sbjct: 44 IYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTA 81
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 39.9 bits (89), Expect = 6e-04
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +3
Query: 264 IVDXGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 377
I GFE PS +Q I G D++ QA+SG GKTA
Sbjct: 44 IYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTA 81
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 39.1 bits (87), Expect = 0.001
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +3
Query: 264 IVDXGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 374
I + G+E PS +Q I A+ G DIL +AK+G GKT
Sbjct: 58 IFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKT 94
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 37.9 bits (84), Expect = 0.002
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +3
Query: 276 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 377
G+ P+ +Q CIP A+ G DI A +G GKTA
Sbjct: 167 GYSDPTPIQQACIPVALTGKDICACAATGTGKTA 200
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 36.3 bits (80), Expect = 0.007
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +3
Query: 279 FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 377
+E P+ +Q IP A+ G D+L AK+G GKTA
Sbjct: 285 YEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTA 317
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 34.3 bits (75), Expect = 0.029
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 264 IVDXGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 374
I GFE PS +Q + G D+ Q+++G GKT
Sbjct: 11 IYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKT 47
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 34.3 bits (75), Expect = 0.029
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 276 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 377
GF P+ +Q + IP + G D++ +++G GKTA
Sbjct: 43 GFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTA 76
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 34.3 bits (75), Expect = 0.029
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 276 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 377
GF P+ +Q + IP + G D++ +++G GKTA
Sbjct: 43 GFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTA 76
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 33.5 bits (73), Expect = 0.051
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 276 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 374
G+ PS++Q +P A+ G D++ A++G GKT
Sbjct: 63 GWMKPSKIQQAALPHALQGKDVIGLAETGSGKT 95
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 33.1 bits (72), Expect = 0.068
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 270 DXGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 374
D + P+E+Q + I ++ G D++ AK+G GKT
Sbjct: 93 DNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKT 127
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 31.9 bits (69), Expect = 0.16
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 264 IVDXGFEHPSEVQHECIPQAVLG-MDILCQAKSGMGKT 374
I GF P+E+Q +P AV D+L A++G GKT
Sbjct: 170 IEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKT 207
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 31.5 bits (68), Expect = 0.21
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 279 FEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 374
+ P+ +Q + IP + G D++ AK+G GKT
Sbjct: 324 YSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKT 355
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 31.1 bits (67), Expect = 0.27
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 276 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 374
GF +E+Q + I + G D+L AK+G GKT
Sbjct: 87 GFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKT 119
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 30.7 bits (66), Expect = 0.36
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 276 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 374
GFE PS +Q + P + G D + +++G GKT
Sbjct: 103 GFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKT 135
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 30.3 bits (65), Expect = 0.48
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 297 VQHECIPQAVLGMDILCQAKSGMGKT 374
VQ CIP+ + G DIL A++G GKT
Sbjct: 115 VQAACIPKILEGSDILGCARTGTGKT 140
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 30.3 bits (65), Expect = 0.48
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 297 VQHECIPQAVLGMDILCQAKSGMGKT 374
VQ CIP+ + G DIL A++G GKT
Sbjct: 115 VQAACIPKILEGSDILGCARTGTGKT 140
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 29.9 bits (64), Expect = 0.63
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 279 FEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 374
F+ P+ +Q P A+ G DI+ AK+G GKT
Sbjct: 149 FQKPTVIQSISWPIAMSGRDIISIAKTGSGKT 180
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 29.1 bits (62), Expect = 1.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 276 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 377
G+ + +Q +P G DIL A++G GKTA
Sbjct: 317 GYTRTTPIQQYTLPLVADGKDILACAQTGSGKTA 350
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 29.1 bits (62), Expect = 1.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 276 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 377
G+ + +Q +P G DIL A++G GKTA
Sbjct: 317 GYTRTTPIQQYTLPLVADGKDILACAQTGSGKTA 350
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 28.7 bits (61), Expect = 1.5
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 297 VQHECIPQAVLGMDILCQAKSGMGKTA 377
+Q IPQ + G D+L QA++ GKTA
Sbjct: 407 IQGAMIPQVLDGHDVLGQAETSAGKTA 433
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 264 IVDXGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 377
+ G+ + +Q +P G DI+ A++G GKTA
Sbjct: 356 VAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTA 393
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 264 IVDXGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 377
+ G+ + +Q +P G DI+ A++G GKTA
Sbjct: 356 VAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTA 393
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 264 IVDXGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 377
+ G+ + +Q +P G DI+ A++G GKTA
Sbjct: 356 VAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTA 393
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 27.5 bits (58), Expect = 3.4
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 264 IVDXGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKT 374
I + G+E ++VQ I A+ +I+ +A++G GKT
Sbjct: 104 IGELGWEKANQVQESVISLALENKNIMGRARTGSGKT 140
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 264 IVDXGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 377
+ G+ + +Q +P G DI+ A++G GKTA
Sbjct: 567 VAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTA 604
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 264 IVDXGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 377
+ G+ + +Q +P G DI+ A++G GKTA
Sbjct: 567 VAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTA 604
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 264 IVDXGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTA 377
+ G+ + +Q +P G DI+ A++G GKTA
Sbjct: 567 VAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTA 604
>U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical
protein W02C12.3g protein.
Length = 437
Score = 26.6 bits (56), Expect = 5.9
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = -2
Query: 335 HTEXGLRNAFVLNFGRMLKTAINNSAEISGLSKKSLKPELWMDT*DPLTSFFGATSVDP 159
HT G +FV + G L NN+A + S +P +M+ P SFF S P
Sbjct: 359 HTPTG---SFVSSSG-FLSEVTNNTAAMQITSPNDSRPNNFMNNSAPSDSFFSVGSASP 413
>U80815-9|AAV34785.1| 361|Caenorhabditis elegans Hypothetical
protein W02C12.3h protein.
Length = 361
Score = 26.6 bits (56), Expect = 5.9
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = -2
Query: 335 HTEXGLRNAFVLNFGRMLKTAINNSAEISGLSKKSLKPELWMDT*DPLTSFFGATSVDP 159
HT G +FV + G L NN+A + S +P +M+ P SFF S P
Sbjct: 222 HTPTG---SFVSSSG-FLSEVTNNTAAMQITSPNDSRPNNFMNNSAPSDSFFSVGSASP 276
>U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical
protein W02C12.3a protein.
Length = 498
Score = 26.6 bits (56), Expect = 5.9
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = -2
Query: 335 HTEXGLRNAFVLNFGRMLKTAINNSAEISGLSKKSLKPELWMDT*DPLTSFFGATSVDP 159
HT G +FV + G L NN+A + S +P +M+ P SFF S P
Sbjct: 359 HTPTG---SFVSSSG-FLSEVTNNTAAMQITSPNDSRPNNFMNNSAPSDSFFSVGSASP 413
>U80815-7|AAO91677.1| 473|Caenorhabditis elegans Hypothetical
protein W02C12.3f protein.
Length = 473
Score = 26.6 bits (56), Expect = 5.9
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = -2
Query: 335 HTEXGLRNAFVLNFGRMLKTAINNSAEISGLSKKSLKPELWMDT*DPLTSFFGATSVDP 159
HT G +FV + G L NN+A + S +P +M+ P SFF S P
Sbjct: 334 HTPTG---SFVSSSG-FLSEVTNNTAAMQITSPNDSRPNNFMNNSAPSDSFFSVGSASP 388
>U80815-6|AAO91675.1| 464|Caenorhabditis elegans Hypothetical
protein W02C12.3d protein.
Length = 464
Score = 26.6 bits (56), Expect = 5.9
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = -2
Query: 335 HTEXGLRNAFVLNFGRMLKTAINNSAEISGLSKKSLKPELWMDT*DPLTSFFGATSVDP 159
HT G +FV + G L NN+A + S +P +M+ P SFF S P
Sbjct: 325 HTPTG---SFVSSSG-FLSEVTNNTAAMQITSPNDSRPNNFMNNSAPSDSFFSVGSASP 379
>U80815-5|AAO91676.1| 439|Caenorhabditis elegans Hypothetical
protein W02C12.3e protein.
Length = 439
Score = 26.6 bits (56), Expect = 5.9
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = -2
Query: 335 HTEXGLRNAFVLNFGRMLKTAINNSAEISGLSKKSLKPELWMDT*DPLTSFFGATSVDP 159
HT G +FV + G L NN+A + S +P +M+ P SFF S P
Sbjct: 300 HTPTG---SFVSSSG-FLSEVTNNTAAMQITSPNDSRPNNFMNNSAPSDSFFSVGSASP 354
>U80815-4|AAO91674.1| 524|Caenorhabditis elegans Hypothetical
protein W02C12.3c protein.
Length = 524
Score = 26.6 bits (56), Expect = 5.9
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = -2
Query: 335 HTEXGLRNAFVLNFGRMLKTAINNSAEISGLSKKSLKPELWMDT*DPLTSFFGATSVDP 159
HT G +FV + G L NN+A + S +P +M+ P SFF S P
Sbjct: 385 HTPTG---SFVSSSG-FLSEVTNNTAAMQITSPNDSRPNNFMNNSAPSDSFFSVGSASP 439
>U80815-3|AAK73899.1| 499|Caenorhabditis elegans Hypothetical
protein W02C12.3b protein.
Length = 499
Score = 26.6 bits (56), Expect = 5.9
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = -2
Query: 335 HTEXGLRNAFVLNFGRMLKTAINNSAEISGLSKKSLKPELWMDT*DPLTSFFGATSVDP 159
HT G +FV + G L NN+A + S +P +M+ P SFF S P
Sbjct: 360 HTPTG---SFVSSSG-FLSEVTNNTAAMQITSPNDSRPNNFMNNSAPSDSFFSVGSASP 414
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,387,147
Number of Sequences: 27780
Number of extensions: 112568
Number of successful extensions: 343
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 343
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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