Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20211
(536 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_06_0035 - 9896289-9896390,9897394-9897503,9897587-9897715,989... 36 0.027
12_01_0101 - 779047-779298,779459-779711,779857-780005,780033-78... 31 0.77
11_01_0101 - 738305-738556,738723-738977,739306-739554,739649-73... 31 0.77
03_06_0621 - 35147070-35148359,35148499-35148579,35148665-351487... 30 1.0
07_03_0502 + 18826595-18826660,18826815-18826885,18828963-188290... 29 1.8
06_01_1133 + 9364842-9364850,9364929-9365048,9365157-9365476,936... 29 3.1
04_04_1385 - 33157557-33157655,33157752-33158201,33158864-331590... 28 4.1
01_06_0449 - 29468797-29469090 28 4.1
05_07_0040 + 27243195-27243428,27243665-27243736,27243837-272439... 28 5.4
03_03_0090 + 14367033-14367279,14367402-14368205,14368314-143700... 28 5.4
03_02_0752 - 10922456-10922644,10922719-10922796,10922888-109230... 28 5.4
01_07_0252 - 42296138-42296281,42296527-42296613,42297043-422971... 28 5.4
09_03_0065 + 12013715-12013720,12013899-12014612 27 7.2
03_05_1036 + 29875585-29875648,29875742-29875956 27 7.2
11_04_0442 - 17790811-17790889,17791047-17791114,17791144-177911... 27 9.5
04_04_1476 - 33863067-33863148,33863239-33863310,33863393-338634... 27 9.5
02_02_0475 - 10746593-10748104 27 9.5
01_06_1816 + 40086972-40087820,40088324-40088459,40088544-400886... 27 9.5
>10_06_0035 -
9896289-9896390,9897394-9897503,9897587-9897715,
9898734-9898800,9898888-9898970,9899878-9899959,
9900049-9900125,9900206-9900289,9900368-9900437,
9900580-9900668,9900921-9901613,9902833-9903142
Length = 631
Score = 35.5 bits (78), Expect = 0.027
Identities = 26/67 (38%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +3
Query: 33 CICIFKKDGKFVRCDDC-KCDENGKCDKTECFCIQTEGKPCICLCSDDKGNIKVCDDC-S 206
C F+ DG +C+D +C E C EC C T G C CS D IK D C S
Sbjct: 505 CPAGFRGDG-VKKCEDINECKEKKACQCPECSCRDTWG-DYECTCSGDLLYIKEHDTCIS 562
Query: 207 CTPAQSK 227
T Q K
Sbjct: 563 KTAVQGK 569
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Frame = +2
Query: 257 CVPTEGKSCICICKKDGKFVR-CDDC-KCDENGKCDKTECFCIQTEGKPCICLCSDDKGN 430
C + C C G V+ C+D +C E C EC C T G C CS D
Sbjct: 495 CQESGNGKCQCPAGFRGDGVKKCEDINECKEKKACQCPECSCRDTWG-DYECTCSGDLLY 553
Query: 431 IK 436
IK
Sbjct: 554 IK 555
>12_01_0101 -
779047-779298,779459-779711,779857-780005,780033-780281,
780377-780571,780681-780788,780935-781156,781669-781986,
781988-782615,783059-783135,783161-783267,783491-783619,
783763-783820,783902-783984,784458-784539,784617-784693,
784827-784910,784999-785068,785146-785234,785319-786008,
786485-786797
Length = 1410
Score = 30.7 bits (66), Expect = 0.77
Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +3
Query: 21 EGKSCICIFKKDGKFVRCDDC-KCDENGKCDKTECFCIQTEGKPCICLCSDDKGNIKVCD 197
+G C FK DG +C+D +C E C EC C T G C CS +K D
Sbjct: 498 DGCKCPDGFKGDGVH-KCEDIDECKERTACQCKECKCKNTWGS-YECGCSGGLLYMKEHD 555
Query: 198 DC 203
C
Sbjct: 556 TC 557
>11_01_0101 -
738305-738556,738723-738977,739306-739554,739649-739843,
739953-740060,740184-740405,740806-741390,741495-741863,
742423-742529,742755-742883,743027-743084,743166-743248,
744115-744196,744274-744350,744477-744560,744649-744718,
744796-744884,744965-745654,746127-746439
Length = 1338
Score = 30.7 bits (66), Expect = 0.77
Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +3
Query: 21 EGKSCICIFKKDGKFVRCDDC-KCDENGKCDKTECFCIQTEGKPCICLCSDDKGNIKVCD 197
+G C FK DG +C+D +C E C EC C T G C CS +K D
Sbjct: 498 DGCKCPDGFKGDGVH-KCEDIDECKERTACQCKECKCKNTWGS-YECGCSGGLLYMKEHD 555
Query: 198 DC 203
C
Sbjct: 556 TC 557
>03_06_0621 -
35147070-35148359,35148499-35148579,35148665-35148741,
35148792-35149298,35149405-35150278
Length = 942
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/48 (27%), Positives = 19/48 (39%)
Frame = +3
Query: 105 CDKTECFCIQTEGKPCICLCSDDKGNIKVCDDCSCTPAQSKELKCDKS 248
C C + G C C + D GN + DDC + + C +S
Sbjct: 257 CGSNNCIDVANGGYSCACPGNSDDGNPYLLDDCKQEFNPTPKKNCSRS 304
>07_03_0502 +
18826595-18826660,18826815-18826885,18828963-18829056,
18829575-18831521
Length = 725
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -1
Query: 335 ICSRHSERISHLSCKCKCKTFLQLVHKATRFVTFQ 231
IC R E ++H C+C T L L ++++ ++F+
Sbjct: 430 ICGREEEDVAHALCRCPHATNLWLSLRSSKDISFE 464
>06_01_1133 +
9364842-9364850,9364929-9365048,9365157-9365476,
9366267-9366428,9367151-9367235,9367352-9367501,
9367588-9367635,9367705-9367773,9367897-9368600,
9369426-9369561,9369636-9369856,9370355-9370486,
9371316-9371406,9371878-9371925,9372004-9372132,
9372357-9372626
Length = 897
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +3
Query: 3 CVCVPTEGKSCICIFKKDGKFVRCDD-CKCDENGKCDKTECFCIQTE--GKPCICLCSDD 173
C C GK C C+ +G C+ C C + K C C +++ + C C +D
Sbjct: 651 CGCQSACGKQCPCL--TNGTC--CEKYCGCPKMCKNRFRGCHCAKSQCRSRQCPCFAADR 706
Query: 174 KGNIKVCDDC 203
+ + VC +C
Sbjct: 707 ECDPDVCRNC 716
>04_04_1385 -
33157557-33157655,33157752-33158201,33158864-33159004,
33159058-33159329,33160371-33160821
Length = 470
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/60 (30%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Frame = +3
Query: 87 CDENGKC-DKTECFCIQTEGKPCICLCSDDKGNIKVCDD-CSCTPAQSKELKCDKSGCFV 260
CD C D T C CI GK C CDD SC P + + C +
Sbjct: 379 CDNYYTCPDSTTCCCIYEYGKYCYAWGCCPLEGATCCDDHYSCCPHEYPICNVQQGTCLM 438
>01_06_0449 - 29468797-29469090
Length = 97
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 272 GKSCICICKKDGKFVRCDDCKCDENGKCDKTEC 370
G++CIC C K R + +GKC +T C
Sbjct: 27 GQNCICECVKLCMRTRIPSIEAQCSGKCRETAC 59
>05_07_0040 +
27243195-27243428,27243665-27243736,27243837-27243904,
27243987-27244113,27244514-27244669
Length = 218
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +3
Query: 48 KKDGKFVRCDDCKCDENGKCDKTECFC---IQTEGKPCICLCSDDKGNIKVCDDC 203
+K G V C C+ +++ +T C C ++ + CI D+KG+ +C+ C
Sbjct: 47 EKSGVLVECRICQEEDDQTYMETPCSCRGSLKYAHRKCIQRWCDEKGD-TICEIC 100
>03_03_0090 +
14367033-14367279,14367402-14368205,14368314-14370039,
14370135-14370219,14370398-14370457,14370744-14370836
Length = 1004
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Frame = +3
Query: 75 DDCKCDENGKCDKTECFCIQT-EGKPCI-----CLCSDDKGNIKVCDDCSCTPAQ 221
D KC +N D ++C ++ +G C +C + N+K CD P Q
Sbjct: 196 DASKCSQNKSLDGSKCSQSKSLDGSKCSNSKVHAVCGNGDSNVKACDRYKVKPLQ 250
>03_02_0752 -
10922456-10922644,10922719-10922796,10922888-10923016,
10923105-10923152,10923243-10923333,10923517-10923648,
10923869-10924086,10925121-10925271,10925360-10926009,
10926715-10926786,10926938-10926985,10927105-10927242,
10927750-10927756,10928064-10928212
Length = 699
Score = 27.9 bits (59), Expect = 5.4
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 78 DCKCDENGKCDKTECFCIQT-EGKPCICLCSDDKGNIKVCDDCSCTPAQSKELKCDKSGC 254
DC C ENG C + C C ++ + + C C+ + + C C A S+E CD C
Sbjct: 463 DCACVENGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSR---QCPCF-AASRE--CDPDVC 516
>01_07_0252 -
42296138-42296281,42296527-42296613,42297043-42297135,
42297267-42297341,42297480-42297575,42297987-42298133,
42298225-42298296,42298912-42298959,42299507-42299607,
42300226-42300337,42300506-42300590,42300693-42300848,
42300956-42301047,42301155-42301238,42301676-42301726,
42302227-42302295,42302417-42302476,42303305-42303535
Length = 600
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -2
Query: 301 FLANANARLSFSWYTKQPDLSHFSSLD*AGVHEQSSHTFIL 179
FL + A S+ W K + +HFSS D G+H S+ + IL
Sbjct: 239 FLTDKQA--SYGWMFKLSEWAHFSSYD-VGLHSGSTASHIL 276
>09_03_0065 + 12013715-12013720,12013899-12014612
Length = 239
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 99 HFHHICSRHSERISHLS*KCKCMTF 25
H H+IC+ E I+H + +C TF
Sbjct: 27 HLHYICAHAEETITHPLHRDRCCTF 51
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 347 HFHHICSRHSERISHLSCKCKCKTF 273
H H+IC+ E I+H + +C TF
Sbjct: 27 HLHYICAHAEETITHPLHRDRCCTF 51
>03_05_1036 + 29875585-29875648,29875742-29875956
Length = 92
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 3 CVCVPTEGKSCICIFKKDGKFVRC 74
C+C PT+G+ C+ + DG +C
Sbjct: 66 CLCAPTDGERCV-LHLHDGSSYKC 88
>11_04_0442 - 17790811-17790889,17791047-17791114,17791144-17791166,
17791210-17795913,17797414-17797624,17798478-17798666
Length = 1757
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 257 CVPTEGKSCICICKKDGKFV 316
C+ + K C CICK+DG F+
Sbjct: 1266 CILFDPK-CTCICKEDGPFI 1284
>04_04_1476 -
33863067-33863148,33863239-33863310,33863393-33863472,
33863549-33863611,33863837-33863924,33864277-33864339,
33864421-33864494,33864683-33864732,33866126-33866295,
33867041-33867120
Length = 273
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 329 SRHSERISHLSCKCKCKTFLQLV 261
S HS + HLSC+ KT + LV
Sbjct: 111 SDHSSPVEHLSCRSSRKTLIYLV 133
>02_02_0475 - 10746593-10748104
Length = 503
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = -2
Query: 205 EQSSHTFILPLSSLHRQIQGFPSVCIQKHSVLSHLPFSSH--LQSSQRTNFPSFL 47
EQSSH LP Q P+ H L SSH L + +++N+ FL
Sbjct: 250 EQSSHQLFLPAEEQSNQQFFMPAEEQSSHQFLPAEEQSSHQFLPAEEQSNYQQFL 304
>01_06_1816 +
40086972-40087820,40088324-40088459,40088544-40088640,
40088742-40088842,40089149-40089312,40089407-40089595,
40089904-40090025,40090200-40090242
Length = 566
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 279 LAFAFARKMGNSFAVTTANVMKMANVI 359
LA AFA+K AVTTA V+++A V+
Sbjct: 452 LASAFAKKDHYKVAVTTARVLQLAVVL 478
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,618,058
Number of Sequences: 37544
Number of extensions: 320144
Number of successful extensions: 991
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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