Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20211
(536 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_38090| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_51924| Best HMM Match : PALP (HMM E-Value=3.1e-05) 36 0.028
SB_13550| Best HMM Match : rve (HMM E-Value=3.4e-08) 36 0.028
SB_36580| Best HMM Match : Borrelia_orfA (HMM E-Value=1.6) 36 0.028
SB_49127| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.037
SB_29802| Best HMM Match : Laminin_EGF (HMM E-Value=0) 35 0.048
SB_54615| Best HMM Match : rve (HMM E-Value=4.4e-25) 34 0.064
SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0) 34 0.064
SB_31807| Best HMM Match : rve (HMM E-Value=4.4e-25) 34 0.064
SB_10244| Best HMM Match : Laminin_EGF (HMM E-Value=0) 34 0.064
SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23) 34 0.085
SB_26932| Best HMM Match : rve (HMM E-Value=3.2) 33 0.11
SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33) 33 0.11
SB_6200| Best HMM Match : Laminin_EGF (HMM E-Value=0) 33 0.11
SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 33 0.20
SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_4052| Best HMM Match : EGF (HMM E-Value=7.2e-05) 33 0.20
SB_16126| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.34
SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.34
SB_39739| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 31 0.60
SB_22953| Best HMM Match : EGF_2 (HMM E-Value=1.3e-14) 31 0.79
SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_786| Best HMM Match : EGF (HMM E-Value=0) 30 1.0
SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_38843| Best HMM Match : Dickkopf_N (HMM E-Value=0.28) 30 1.0
SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_52909| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_471| Best HMM Match : Laminin_EGF (HMM E-Value=0) 29 2.4
SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0) 29 3.2
SB_49286| Best HMM Match : Laminin_N (HMM E-Value=0) 29 3.2
SB_27398| Best HMM Match : DUF1096 (HMM E-Value=2.3) 29 3.2
SB_9510| Best HMM Match : Keratin_B2 (HMM E-Value=3.8e-05) 29 3.2
SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16) 29 3.2
SB_21938| Best HMM Match : Big_2 (HMM E-Value=0.69) 29 3.2
SB_9221| Best HMM Match : Cornifin (HMM E-Value=6.7) 29 3.2
SB_552| Best HMM Match : Laminin_EGF (HMM E-Value=1.3e-23) 29 3.2
SB_53740| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 28 4.2
SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013) 28 4.2
SB_25222| Best HMM Match : Flagellin_C (HMM E-Value=0.72) 28 4.2
SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_2315| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_46360| Best HMM Match : EGF (HMM E-Value=0) 28 4.2
SB_32722| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_23967| Best HMM Match : SRCR (HMM E-Value=5.4e-11) 28 4.2
SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_6077| Best HMM Match : EGF (HMM E-Value=0) 28 4.2
SB_5218| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_56788| Best HMM Match : 7tm_1 (HMM E-Value=4e-32) 28 5.6
SB_27229| Best HMM Match : 7tm_1 (HMM E-Value=0.0014) 28 5.6
SB_21099| Best HMM Match : Thyroglobulin_1 (HMM E-Value=1e-25) 28 5.6
SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_14021| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_30923| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_22642| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_7007| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_52925| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 9.7
SB_42661| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_31963| Best HMM Match : Integrin_beta (HMM E-Value=0) 27 9.7
SB_25340| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_16910| Best HMM Match : EGF (HMM E-Value=0) 27 9.7
SB_8046| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5) 27 9.7
>SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1937
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +3
Query: 9 CVPTEG-KSCICIFKKDGKFVRCDDC-KCDENGKCDKTECFCIQTEGKPCICLCSDDKGN 182
C +G K C+C G C D +C++N +CD + C TEG C C G
Sbjct: 850 CFTYQGQKQCVCERGYQGNGEDCKDINECEQNHECDPLKAVCTNTEGS-YSCTCRPGYGG 908
Query: 183 IKVCDDCSCTPAQS 224
D +CTP S
Sbjct: 909 ----DGRTCTPISS 918
Score = 36.3 bits (80), Expect = 0.016
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +2
Query: 257 CVPTEG-KSCICICKKDGKFVRCDDC-KCDENGKCDKTECFCIQTEGK-PCIC 406
C +G K C+C G C D +C++N +CD + C TEG C C
Sbjct: 850 CFTYQGQKQCVCERGYQGNGEDCKDINECEQNHECDPLKAVCTNTEGSYSCTC 902
Score = 32.3 bits (70), Expect = 0.26
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 9/97 (9%)
Frame = +3
Query: 3 CVCVPTEGKSCICIFKKDGKFVRC--DDC------KCDENGKCDKTECFCIQTEGK-PCI 155
CV + G+ C+C+ G V C D+C +C +CD CI T G C
Sbjct: 760 CVRLAVGGQVCVCLPGYTGDGVSCEHDECFVADVKECARLDRCD-PNADCIDTVGSYRCA 818
Query: 156 CLCSDDKGNIKVCDDCSCTPAQSKELKCDKSGCFVYQ 266
C S G+ +C + A ++ + CF YQ
Sbjct: 819 CK-SGYTGDGSICTKVPSSVACGGKVCHTHAECFTYQ 854
Score = 30.7 bits (66), Expect = 0.79
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 9/95 (9%)
Frame = +3
Query: 3 CVCVPT---EGKSCICIFKKDGKFVRCDDCKCDENGKCDKTECFCIQTEGKPCICLCSDD 173
CVC P +G+ C DG C+ KCD N K C G+ C C+D
Sbjct: 1224 CVCNPGYLGDGRKCTA----DGT---CEGVKCDPNAK-----CIAASPSGENRTCACNDG 1271
Query: 174 -KGNIKVC---DDCSCTPAQ-SKELKC-DKSGCFV 260
GN C D+C+ A ++ +C ++ G FV
Sbjct: 1272 FSGNGLFCRDIDECALGHANCHRKAECVNQLGSFV 1306
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/52 (34%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +2
Query: 293 CKKDGKFVRCDDCKCDENGKCDKTECFCIQTEGKPCICLCSDD-KGNIKVCR 445
C DG C+ KCD N K C G+ C C+D GN CR
Sbjct: 1237 CTADGT---CEGVKCDPNAK-----CIAASPSGENRTCACNDGFSGNGLFCR 1280
>SB_38090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 431
Score = 36.7 bits (81), Expect = 0.012
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +3
Query: 3 CVCVPTEGKS--CICIFKKDGKFVRCDDCKCDENGKCDKTECFCIQTEGKPCICLCSDDK 176
C C+ E + C C+ +D V C C +E+ + CFC++ E +C C ++
Sbjct: 130 CCCMKNEDNAPICCCMKNEDNAAVCC--CMKNED---NAPVCFCMKNEDNAPVCCCMKNE 184
Query: 177 GNIKVC 194
N VC
Sbjct: 185 DNAPVC 190
Score = 36.7 bits (81), Expect = 0.012
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +2
Query: 257 CVPTEGKSCICICKKDGKFVRCDDCKCDENGKCDKTECFCIQTEGKPCICLCSDDKGNIK 436
C+ E + IC C K+ C C +N + + CFC++ E +C C ++ N
Sbjct: 132 CMKNEDNAPICCCMKNEDNAAV--CCCMKN-EDNAPVCFCMKNEDNAPVCCCMKNEDNAP 188
Query: 437 VC 442
VC
Sbjct: 189 VC 190
Score = 35.1 bits (77), Expect = 0.037
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +2
Query: 257 CVPTEGKSCICICKKDGKFVRCDDCKCDENGKCDKTECFCIQTEGKPCICLCSDDKGNIK 436
C+ E + +C C K+ C C +N + + C C++ E +C C ++ N
Sbjct: 156 CMKNEDNAPVCFCMKNED--NAPVCCCMKN-EDNAPVCCCMKNEDNAAVCCCMKNEDNAP 212
Query: 437 VC 442
VC
Sbjct: 213 VC 214
Score = 34.3 bits (75), Expect = 0.064
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +3
Query: 3 CVCVPTEGKS--CICIFKKDGKFVRCDDCKCDENGKCDKTECFCIQTEGKPCICLCSDDK 176
C C+ E + C C+ +D V C C +E+ + C C++ E +C C ++
Sbjct: 154 CCCMKNEDNAPVCFCMKNEDNAPVCC--CMKNED---NAPVCCCMKNEDNAAVCCCMKNE 208
Query: 177 GNIKVC 194
N VC
Sbjct: 209 DNAPVC 214
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 9/71 (12%)
Frame = +2
Query: 257 CVPTEGKSCICIC-KKDGKFVRCDDCKCDENGK---CDKTE-----CFCIQTEGKPCICL 409
C+ E + +C C K + C K ++N C K E C C++ E +C
Sbjct: 24 CMKNEDNAAVCCCMKNEDNAPVCCCMKNEDNAPIFCCMKNEDNAAVCCCMKNEDNAPVCC 83
Query: 410 CSDDKGNIKVC 442
C ++ N+ +C
Sbjct: 84 CIKNEDNVPIC 94
Score = 33.5 bits (73), Expect = 0.11
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +3
Query: 3 CVCVPTEGKS--CICIFKKDGKFVRCDDCKCDENGKCDKTECFCIQTEGKPCICLCSDDK 176
C C+ E + C C+ +D + C C +E+ + C C++ E +C C ++
Sbjct: 34 CCCMKNEDNAPVCCCMKNEDNAPIFC--CMKNED---NAAVCCCMKNEDNAPVCCCIKNE 88
Query: 177 GNIKVC 194
N+ +C
Sbjct: 89 DNVPIC 94
Score = 31.9 bits (69), Expect = 0.34
Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +3
Query: 3 CVCVPTEGKS--CICIFKKDGKFVRCDDCKCDENGKCDKTECFCIQTEGKPCICLCSDDK 176
C C+ E C C+ +D + C C +E+ + C C++ E +C C ++
Sbjct: 82 CCCIKNEDNVPICCCMKNEDNAPIFC--CMKNED---NAAVCCCMKNEDNAPVCCCMKNE 136
Query: 177 GNIKVC 194
N +C
Sbjct: 137 DNAPIC 142
Score = 31.1 bits (67), Expect = 0.60
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 9/71 (12%)
Frame = +2
Query: 257 CVPTEGKSCICICKKDGKFVRCDDCKCDENGK----CDKTE-----CFCIQTEGKPCICL 409
C+ E IC C K+ C +E+ C K E C C++ E IC
Sbjct: 84 CIKNEDNVPICCCMKNEDNAPIFCCMKNEDNAAVCCCMKNEDNAPVCCCMKNEDNAPICC 143
Query: 410 CSDDKGNIKVC 442
C ++ N VC
Sbjct: 144 CMKNEDNAAVC 154
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/58 (24%), Positives = 26/58 (44%)
Frame = +2
Query: 257 CVPTEGKSCICICKKDGKFVRCDDCKCDENGKCDKTECFCIQTEGKPCICLCSDDKGN 430
C+ E + +C C K+ C C +N + + C C++ E +C C ++ N
Sbjct: 168 CMKNEDNAPVCCCMKNED--NAPVCCCMKN-EDNAAVCCCMKNEDNAPVCCCMKNEDN 222
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 3/65 (4%)
Frame = +2
Query: 257 CVPTEGKSCICICKKDGKFVRCDD---CKCDENGKCDKTECFCIQTEGKPCICLCSDDKG 427
C+ E + +C C K+ +D C K + C++ E +C C ++
Sbjct: 204 CMKNEDNAPVCCCMKNEDNAPNEDNAPVYCCMKNKDNAPIYCCMKNEDNAPVCCCMKNED 263
Query: 428 NIKVC 442
N VC
Sbjct: 264 NAPVC 268
Score = 27.9 bits (59), Expect = 5.6
Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 9/70 (12%)
Frame = +2
Query: 257 CVPTEGKSCICICKKDGKFVRCDDCKCDENGK----CDKTE-----CFCIQTEGKPCICL 409
C+ E + +C C K+ C +E+ C K E C CI+ E IC
Sbjct: 36 CMKNEDNAPVCCCMKNEDNAPIFCCMKNEDNAAVCCCMKNEDNAPVCCCIKNEDNVPICC 95
Query: 410 CSDDKGNIKV 439
C ++ N +
Sbjct: 96 CMKNEDNAPI 105
Score = 27.1 bits (57), Expect = 9.7
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +3
Query: 120 CFCIQTEGKPCICLCSDDKGNIKVC 194
C C++ E +C C ++ N VC
Sbjct: 22 CCCMKNEDNAAVCCCMKNEDNAPVC 46
Score = 27.1 bits (57), Expect = 9.7
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = +2
Query: 368 CFCIQTEGKPCICLCSDDKGNIKVC 442
C C++ E +C C ++ N VC
Sbjct: 22 CCCMKNEDNAAVCCCMKNEDNAPVC 46
Score = 27.1 bits (57), Expect = 9.7
Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 3/67 (4%)
Frame = +3
Query: 3 CVCVPTEGKSCICIFKKDGKFVRCDD---CKCDENGKCDKTECFCIQTEGKPCICLCSDD 173
C C+ E + +C K+ +D C K + C++ E +C C +
Sbjct: 202 CCCMKNEDNAPVCCCMKNEDNAPNEDNAPVYCCMKNKDNAPIYCCMKNEDNAPVCCCMKN 261
Query: 174 KGNIKVC 194
+ N VC
Sbjct: 262 EDNAPVC 268
>SB_51924| Best HMM Match : PALP (HMM E-Value=3.1e-05)
Length = 407
Score = 35.5 bits (78), Expect = 0.028
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = -1
Query: 425 LCHRYTDKYKVFLQSVYRNIPFYHICHFHHICSRHSERISHLSCKCK 285
+CHR DK +L Y N+P I F IC H E+ S L+ CK
Sbjct: 281 ICHRGRDKTAKYLSENYSNLPKQIITLFTSICKLHQEQAS-LTNYCK 326
Score = 35.1 bits (77), Expect = 0.037
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = -3
Query: 177 LCHRYTDKYKVFLQSVYRNIPFYHICHFHHICSRHSERISHLS*KCK 37
+CHR DK +L Y N+P I F IC H E+ S L+ CK
Sbjct: 281 ICHRGRDKTAKYLSENYSNLPKQIITLFTSICKLHQEQAS-LTNYCK 326
>SB_13550| Best HMM Match : rve (HMM E-Value=3.4e-08)
Length = 241
Score = 35.5 bits (78), Expect = 0.028
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = -1
Query: 425 LCHRYTDKYKVFLQSVYRNIPFYHICHFHHICSRHSERISHLSCKCK 285
+CHR DK +L Y N+P I F IC H E+ S L+ CK
Sbjct: 57 ICHRGRDKTAKYLSENYSNLPKQIITLFTSICKLHQEQAS-LTNYCK 102
Score = 35.1 bits (77), Expect = 0.037
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = -3
Query: 177 LCHRYTDKYKVFLQSVYRNIPFYHICHFHHICSRHSERISHLS*KCK 37
+CHR DK +L Y N+P I F IC H E+ S L+ CK
Sbjct: 57 ICHRGRDKTAKYLSENYSNLPKQIITLFTSICKLHQEQAS-LTNYCK 102
>SB_36580| Best HMM Match : Borrelia_orfA (HMM E-Value=1.6)
Length = 364
Score = 35.5 bits (78), Expect = 0.028
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = -1
Query: 425 LCHRYTDKYKVFLQSVYRNIPFYHICHFHHICSRHSERISHLSCKCK 285
+CHR DK +L Y N+P I F IC H E+ S L+ CK
Sbjct: 105 ICHRGRDKTAKYLSENYSNLPKQIITLFTSICKLHQEQAS-LTNYCK 150
Score = 35.1 bits (77), Expect = 0.037
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = -3
Query: 177 LCHRYTDKYKVFLQSVYRNIPFYHICHFHHICSRHSERISHLS*KCK 37
+CHR DK +L Y N+P I F IC H E+ S L+ CK
Sbjct: 105 ICHRGRDKTAKYLSENYSNLPKQIITLFTSICKLHQEQAS-LTNYCK 150
>SB_49127| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 35.1 bits (77), Expect = 0.037
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = -1
Query: 425 LCHRYTDKYKVFLQSVYRNIPFYHICHFHHICSRHSERISHLSCKCK 285
+CHR DK +L Y N+P I F +C H E+ S L+ CK
Sbjct: 105 ICHRGRDKTAKYLSENYNNLPKQIITLFTSLCKLHQEQAS-LTNYCK 150
Score = 34.7 bits (76), Expect = 0.048
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = -3
Query: 177 LCHRYTDKYKVFLQSVYRNIPFYHICHFHHICSRHSERISHLS*KCK 37
+CHR DK +L Y N+P I F +C H E+ S L+ CK
Sbjct: 105 ICHRGRDKTAKYLSENYNNLPKQIITLFTSLCKLHQEQAS-LTNYCK 150
>SB_29802| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 546
Score = 34.7 bits (76), Expect = 0.048
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 7/67 (10%)
Frame = +3
Query: 81 CKCDENGK----CDKT--ECFC-IQTEGKPCICLCSDDKGNIKVCDDCSCTPAQSKELKC 239
C C+ G CD++ C C + GK C LC N C C C P +K+ C
Sbjct: 2 CNCNPEGATNLVCDQSTGRCPCRTRIRGKKCD-LCPLGHFNFPRCKGCDCDPLTTKDEIC 60
Query: 240 DKSGCFV 260
D +G V
Sbjct: 61 DNTGSCV 67
Score = 28.3 bits (60), Expect = 4.2
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 8/67 (11%)
Frame = +3
Query: 81 CKCDENGK----CDKT--ECFCIQTE-GKPCICLCSDDKGNIKVCDDCSCTPAQSKELK- 236
C C+ G CD+ +C C + G C +C+ D + C C+C P + L
Sbjct: 155 CNCNVQGSESQSCDQASGKCTCKKNVIGWKCD-MCAKDLVSFPACTKCNCDPGGTVVLPG 213
Query: 237 CDKSGCF 257
K GCF
Sbjct: 214 QSKVGCF 220
>SB_54615| Best HMM Match : rve (HMM E-Value=4.4e-25)
Length = 460
Score = 34.3 bits (75), Expect = 0.064
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -1
Query: 425 LCHRYTDKYKVFLQSVYRNIPFYHICHFHHICSRHSERIS 306
+CHR DK +L Y N+P I F IC H E+ S
Sbjct: 105 ICHRGRDKTAKYLSGNYSNLPKQIITLFTSICKLHQEQAS 144
Score = 34.3 bits (75), Expect = 0.064
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -3
Query: 177 LCHRYTDKYKVFLQSVYRNIPFYHICHFHHICSRHSERIS 58
+CHR DK +L Y N+P I F IC H E+ S
Sbjct: 105 ICHRGRDKTAKYLSGNYSNLPKQIITLFTSICKLHQEQAS 144
>SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0)
Length = 960
Score = 34.3 bits (75), Expect = 0.064
Identities = 25/92 (27%), Positives = 35/92 (38%), Gaps = 6/92 (6%)
Frame = +3
Query: 3 CVCVPT-EGKSCICIFKKDGKF-VRCDD-CKCDENGKCDKT--ECFCIQ-TEGKPCICLC 164
C C P G +C + DG++ + C C C E G CD +C C+ G CI C
Sbjct: 155 CACAPGFHGNTCQ-LPCPDGQWGIDCKGVCTCSEYGSCDSRTGKCHCMPGYSGPTCIDEC 213
Query: 165 SDDKGNIKVCDDCSCTPAQSKELKCDKSGCFV 260
+ C C S + + C V
Sbjct: 214 PTGYYGYECTQKCQCVNGASCDRRTGSCNCTV 245
Score = 31.5 bits (68), Expect = 0.45
Identities = 23/76 (30%), Positives = 28/76 (36%), Gaps = 5/76 (6%)
Frame = +3
Query: 3 CVC-VPTEGKSCICIFKKDGKFVRCDD-CKCDENGKCDKT--ECFCIQ-TEGKPCICLCS 167
C C V +GK C I K C C C+ KCD+ C C EG C C
Sbjct: 884 CTCPVGYKGKYCDVICDKGTFGPGCTQRCLCENGAKCDRKTGACTCAPGFEGLRCSRPCL 943
Query: 168 DDKGNIKVCDDCSCTP 215
+ + C C P
Sbjct: 944 EGRYGGNCTKICDCNP 959
Score = 29.9 bits (64), Expect = 1.4
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Frame = +2
Query: 269 EGKSCICICKKDGKFVRCDD-CKCDENGKCDKT--ECFCIQ-TEGKPCICLCSDDK--GN 430
+GK C IC K C C C+ KCD+ C C EG C C + + GN
Sbjct: 891 KGKYCDVICDKGTFGPGCTQRCLCENGAKCDRKTGACTCAPGFEGLRCSRPCLEGRYGGN 950
Query: 431 -IKVC 442
K+C
Sbjct: 951 CTKIC 955
Score = 28.7 bits (61), Expect = 3.2
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
Frame = +2
Query: 257 CVPT-EGKSCICICKKDGKF-VRCDD-CKCDENGKCDKT--ECFCIQ-TEGKPCICLC 412
C P G +C C DG++ + C C C E G CD +C C+ G CI C
Sbjct: 157 CAPGFHGNTCQLPCP-DGQWGIDCKGVCTCSEYGSCDSRTGKCHCMPGYSGPTCIDEC 213
Score = 27.1 bits (57), Expect = 9.7
Identities = 16/64 (25%), Positives = 23/64 (35%), Gaps = 3/64 (4%)
Frame = +3
Query: 81 CKCDENGKCDKT--ECFCIQ-TEGKPCICLCSDDKGNIKVCDDCSCTPAQSKELKCDKSG 251
C+C NG+CD C C G C C + C+C + CD +
Sbjct: 419 CQCSRNGECDAASGRCACAPGFTGDRCESRCPKGYYGTNCSNACTCKATNTN--VCDVTS 476
Query: 252 CFVY 263
F +
Sbjct: 477 GFCH 480
>SB_31807| Best HMM Match : rve (HMM E-Value=4.4e-25)
Length = 460
Score = 34.3 bits (75), Expect = 0.064
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -1
Query: 425 LCHRYTDKYKVFLQSVYRNIPFYHICHFHHICSRHSERIS 306
+CHR DK +L Y N+P I F IC H E+ S
Sbjct: 105 ICHRGRDKTAKYLSGNYSNLPKQIITLFTSICKLHQEQAS 144
Score = 34.3 bits (75), Expect = 0.064
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -3
Query: 177 LCHRYTDKYKVFLQSVYRNIPFYHICHFHHICSRHSERIS 58
+CHR DK +L Y N+P I F IC H E+ S
Sbjct: 105 ICHRGRDKTAKYLSGNYSNLPKQIITLFTSICKLHQEQAS 144
>SB_10244| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 205
Score = 34.3 bits (75), Expect = 0.064
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 8/68 (11%)
Frame = +3
Query: 72 CDDCKCDENGK----CDKT--ECFC-IQTEGKPCI-CLCSDDKGNIKVCDDCSCTPAQSK 227
C C C+ NG CD +C C G+ C C S C +C+C S
Sbjct: 108 CRPCDCNVNGSSSSLCDHVTGQCSCKANVVGRDCSRCKVSSYGFGPAGCTECACNVHGSA 167
Query: 228 ELKCDKSG 251
L+CD SG
Sbjct: 168 SLQCDDSG 175
>SB_22952| Best HMM Match : EGF_2 (HMM E-Value=2e-23)
Length = 300
Score = 33.9 bits (74), Expect = 0.085
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +3
Query: 81 CKCDENGKCDKTECFCIQTEGKPCI-CLCSDDKGNIKVCDDCSC 209
CKC +N CDK + C G I C CS K K CSC
Sbjct: 232 CKCQKNATCDKIDGTCQCKPGWTGIDCECSPGKYGNKCEKTCSC 275
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/67 (26%), Positives = 25/67 (37%), Gaps = 4/67 (5%)
Frame = +3
Query: 24 GKSCICIFKKDGKFVRCDD-CKCDENGKCDKT--ECFCIQT-EGKPCICLCSDDKGNIKV 191
G++C + V C C C N C +C C G C C+ D G +
Sbjct: 126 GENCDITCSQGRWGVGCQGTCDCKNNATCSPFTGQCNCTSGFTGDRCEKQCAGDSGGVDC 185
Query: 192 CDDCSCT 212
C+CT
Sbjct: 186 RQHCNCT 192
Score = 29.5 bits (63), Expect = 1.8
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +2
Query: 272 GKSCICICKKDGKF-VRCD-DCKCDENGKCDKTECFCIQTEGKPCI-CLCSDDK-GN 430
G+ C C DG + C CKC +N CDK + C G I C CS K GN
Sbjct: 212 GEDCGAECP-DGTYGPACTAHCKCQKNATCDKIDGTCQCKPGWTGIDCECSPGKYGN 267
>SB_26932| Best HMM Match : rve (HMM E-Value=3.2)
Length = 241
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = -1
Query: 425 LCHRYTDKYKVFLQSVYRNIPFYHICHFHHICSRHSERISHLSCKCK 285
+CHR +K +L Y N+P I F IC H E+ S L+ CK
Sbjct: 76 ICHRGKNKTAKYLSENYSNLPKQIITLFTSICKLHQEQAS-LTNYCK 121
Score = 33.1 bits (72), Expect = 0.15
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = -3
Query: 177 LCHRYTDKYKVFLQSVYRNIPFYHICHFHHICSRHSERISHLS*KCK 37
+CHR +K +L Y N+P I F IC H E+ S L+ CK
Sbjct: 76 ICHRGKNKTAKYLSENYSNLPKQIITLFTSICKLHQEQAS-LTNYCK 121
>SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33)
Length = 1065
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Frame = +2
Query: 287 CICKKD--GKFVRCDDC-KCDENGKCDKTECFCIQTEGK-PCIC 406
C+CK G V C+D +CD CDK CI T G C C
Sbjct: 459 CVCKSGYHGDGVTCEDIDECDIAHHCDKLHATCINTPGSHTCRC 502
Score = 33.1 bits (72), Expect = 0.15
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +3
Query: 33 CICIFKKDGKFVRCDDC-KCDENGKCDKTECFCIQTEGK-PCIC 158
C+C G V C+D +CD CDK CI T G C C
Sbjct: 459 CVCKSGYHGDGVTCEDIDECDIAHHCDKLHATCINTPGSHTCRC 502
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/53 (26%), Positives = 20/53 (37%), Gaps = 5/53 (9%)
Frame = +3
Query: 66 VRCDDCKCDENGKCDK-TECFCIQTEGKPCICLCSDDKGNIKVC----DDCSC 209
++CD C KCD+ C C + C +C+ C D C C
Sbjct: 370 LKCDCLSCTRAAKCDRELTCTCNKKWEGSCNAICTRTSNATSSCVTLGDQCHC 422
>SB_6200| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 683
Score = 33.5 bits (73), Expect = 0.11
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 8/69 (11%)
Frame = +3
Query: 69 RCDDCKCDENGK----CDKT--ECFCIQTE-GKPCI-CLCSDDKGNIKVCDDCSCTPAQS 224
+C C C+ NG CD +C C + G+ C C + C +C+C S
Sbjct: 149 QCKACDCNVNGSSSSLCDHVTGQCSCKENVVGRDCSRCKVNSYGFGPAGCTECACNVHGS 208
Query: 225 KELKCDKSG 251
L+CD SG
Sbjct: 209 ASLQCDDSG 217
>SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 6725
Score = 32.7 bits (71), Expect = 0.20
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +3
Query: 102 KCDKTECFCIQTEGKPCICLCSD-DKGNIKVC---DDCSCTPAQSKELKCDKSGCFVYQL 269
+C KT+CFC+ G D KGN VC CT +S ++ + G FV Q
Sbjct: 1307 QCYKTDCFCVNEYGVYMSASRVDISKGN-AVCGKSGSTKCTRQRSSAIEAQRPGAFVPQC 1365
Query: 270 K 272
K
Sbjct: 1366 K 1366
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Frame = +2
Query: 251 LLCVPTEGKSCICICKKDGKFVRCDDCKCDENG-----KCDKTECFCIQTEGK 394
++C +GK+ C+K+ + D CD NG +C+K C+C+ GK
Sbjct: 2054 VVCSTRDGKTT---CQKEQEEKGISDL-CDSNGGFKPLQCEKPYCWCVDRNGK 2102
>SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2680
Score = 32.7 bits (71), Expect = 0.20
Identities = 22/79 (27%), Positives = 29/79 (36%), Gaps = 6/79 (7%)
Frame = +3
Query: 33 CICIFKKDGKFVRCDDCKCDENGK----CDKTE-CFCIQT-EGKPCICLCSDDKGNIKVC 194
C+ + + C C CD +G C+ T C C G+ C G C
Sbjct: 809 CVSAYYWNPSGYGCSPCNCDASGSLATNCNSTGYCQCKPNIGGRRCDRCMPGSYGGPGSC 868
Query: 195 DDCSCTPAQSKELKCDKSG 251
C+C A S CD SG
Sbjct: 869 KPCNCNMAGSLSDTCDDSG 887
>SB_4052| Best HMM Match : EGF (HMM E-Value=7.2e-05)
Length = 117
Score = 32.7 bits (71), Expect = 0.20
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Frame = +3
Query: 27 KSCICI--FKKDGKFVRCDDCK--CDENGKCDKTECFC 128
K CIC F DG R D+C C ++GKC + C C
Sbjct: 19 KECICKAGFSGDGTTCRVDNCVNGCSKHGKCIRGFCIC 56
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 6/36 (16%)
Frame = +2
Query: 287 CICKK----DGKFVRCDDCK--CDENGKCDKTECFC 376
CICK DG R D+C C ++GKC + C C
Sbjct: 21 CICKAGFSGDGTTCRVDNCVNGCSKHGKCIRGFCIC 56
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/19 (57%), Positives = 11/19 (57%), Gaps = 1/19 (5%)
Frame = +3
Query: 75 DDCK-CDENGKCDKTECFC 128
DDC C N KC K EC C
Sbjct: 5 DDCNGCHHNAKCVKKECIC 23
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/19 (57%), Positives = 11/19 (57%), Gaps = 1/19 (5%)
Frame = +2
Query: 323 DDCK-CDENGKCDKTECFC 376
DDC C N KC K EC C
Sbjct: 5 DDCNGCHHNAKCVKKECIC 23
>SB_16126| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1056
Score = 31.9 bits (69), Expect = 0.34
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = -1
Query: 521 VGTQMATRFVIFLVL*TEQGVHEAIIGIPLYYLCH-RYTDKYKVFLQSVYRNIPFYHICH 345
VGT+ F++FL T + + A++ P+ Y H + KY + S+Y+ +P
Sbjct: 585 VGTKGKKSFLLFLDGKTFKELARAVVDCPIAYSLHGMFKSKYGLTPASLYKELP------ 638
Query: 344 FHHICSRHSERISHLSCKCKCKTFL 270
HI ER+ KC K F+
Sbjct: 639 -KHI-KNDKERLGIQPLKCSAKDFV 661
>SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1931
Score = 31.9 bits (69), Expect = 0.34
Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 13/96 (13%)
Frame = +3
Query: 3 CVCVP-TEGKSC-ICIFKKDG--KFVRCDDCKCDENG------KCD-KT-ECFCIQTE-G 143
C C P T G +C +C+ G + C DCKCD G C+ KT +C C + G
Sbjct: 697 CDCPPNTVGLNCELCLKGTFGYNPILGCQDCKCDRFGVAGGNIACNPKTGQCPCKPSHTG 756
Query: 144 KPCICLCSDDKGNIKVCDDCSCTPAQSKELKCDKSG 251
+ C C+ C C C CD +G
Sbjct: 757 RRC-DQCAVGYHGYPYCQQCDCDARGVNGSVCDSTG 791
Score = 27.1 bits (57), Expect = 9.7
Identities = 18/60 (30%), Positives = 23/60 (38%), Gaps = 6/60 (10%)
Frame = +2
Query: 251 LLCVPTEGKSCICICKKDGKFVRCDDCKCDENG--KCDKTECFCIQTEGKPC----ICLC 412
+ C P G+ C CK RCD C +G C + +C G C CLC
Sbjct: 739 IACNPKTGQ---CPCKPSHTGRRCDQCAVGYHGYPYCQQCDCDARGVNGSVCDSTGRCLC 795
>SB_39739| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 1120
Score = 31.1 bits (67), Expect = 0.60
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +3
Query: 57 GKFV-RCDDCKCDENGKCDKTECFCIQTEGKPCICLCSDDKGNIKVCDDCSCTPAQSKEL 233
G+++ CD + +C + CFC+ G P D K ++ C P ++
Sbjct: 76 GQYIPECDPSGAFKQTQCHEGYCFCVDKHGIP------DMKTRVRGKPTCPVCPKGVSQM 129
Query: 234 KCDKSGC 254
KCD C
Sbjct: 130 KCDVMLC 136
>SB_22953| Best HMM Match : EGF_2 (HMM E-Value=1.3e-14)
Length = 635
Score = 30.7 bits (66), Expect = 0.79
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +2
Query: 269 EGKSCICICKKDGKFVRCDD-CKCDENGKCDKTECFCIQTEG 391
+G SC C V C++ C+C N CD + C T G
Sbjct: 122 DGPSCDQACTLGRWDVNCNNTCECQNNSTCDSVQGICNCTSG 163
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = +3
Query: 3 CVCVPT-EGKSCICIFKKDGKFVRCDD-CKCDENGKCDKTECFCIQTEG 143
C C P +G SC V C++ C+C N CD + C T G
Sbjct: 115 CTCHPGYDGPSCDQACTLGRWDVNCNNTCECQNNSTCDSVQGICNCTSG 163
Score = 27.1 bits (57), Expect = 9.7
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 7/64 (10%)
Frame = +3
Query: 81 CKCDENGKCDKTECFCIQ-----TEGKPC--ICLCSDDKGNIKVCDDCSCTPAQSKELKC 239
C+C CD C Q T G C +C C+D + V +C+C A S C
Sbjct: 229 CQCMNGATCDHVTGRCDQRCPVGTYGFDCAKVCACADTEKCSVVSGECTCI-AGSCSSSC 287
Query: 240 DKSG 251
+G
Sbjct: 288 PCAG 291
>SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5834
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 278 SCICICKKDGKFVRCDDCKCDENGKCDKTECFC 376
S IC C+ + + CD +C +GKC+ + C C
Sbjct: 292 SAICRCEACYQGLACD-VECSGHGKCNGSHCIC 323
>SB_786| Best HMM Match : EGF (HMM E-Value=0)
Length = 1427
Score = 30.3 bits (65), Expect = 1.0
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +2
Query: 254 LCVPTEGKSCICICKKDGKFVRCDDC-KCDENGKCDKTECFCIQTEGKPCIC 406
+CV + G C CK+D K C+ CD N C C + G C+C
Sbjct: 211 VCV-SRGVGYHCKCKRDFKGPHCEMVDMCDMN-PCKNGRCVADEKAGYKCVC 260
Score = 29.9 bits (64), Expect = 1.4
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = +3
Query: 6 VCVPTEGKSCICIFKKDGKFVRCDDCK-CDENGKCDKTECFCIQTEGKPCICLCSDDKGN 182
VCV + G C K+D K C+ CD N C C + G C+C S G
Sbjct: 211 VCV-SRGVGYHCKCKRDFKGPHCEMVDMCDMN-PCKNGRCVADEKAGYKCVC-HSGFVG- 266
Query: 183 IKVCDDCSCTP 215
K CD+ C P
Sbjct: 267 -KNCDENYCVP 276
>SB_59261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5445
Score = 30.3 bits (65), Expect = 1.0
Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 6/73 (8%)
Frame = +3
Query: 6 VCVPTEGKSCIC---IFKKDGKFVRCDDCKCDENGKCDKT--ECFC-IQTEGKPCICLCS 167
V +P + SC C KD + V+ D C C G C+ T C C G C +C
Sbjct: 507 VAIPGD-YSCACHTGFTGKDCEIVK-DSCGCQNGGTCNSTSRSCTCPAMFTGSICEIVCE 564
Query: 168 DDKGNIKVCDDCS 206
K N+ D S
Sbjct: 565 TQKFNLAFLVDGS 577
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Frame = +2
Query: 278 SCIC---ICKKDGKFVRCDDCKCDENGKCDKT--ECFC-IQTEGKPCICLCSDDKGNI 433
SC C KD + V+ D C C G C+ T C C G C +C K N+
Sbjct: 514 SCACHTGFTGKDCEIVK-DSCGCQNGGTCNSTSRSCTCPAMFTGSICEIVCETQKFNL 570
Score = 27.1 bits (57), Expect = 9.7
Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 13/69 (18%)
Frame = +2
Query: 266 TEGKSCICICKKDGKFVRC----DDCK----CDENGKCDKT----ECFCI-QTEGKPCIC 406
T GK +C C D V C D+C C G C + C C Q GK C
Sbjct: 1145 TNGKLAVCNCPGDFTGVHCETNKDECNEAMPCRNGGSCYNSIGFFNCTCTNQYVGKLCEV 1204
Query: 407 LCSDDKGNI 433
C +K N+
Sbjct: 1205 GCDFNKLNL 1213
>SB_38843| Best HMM Match : Dickkopf_N (HMM E-Value=0.28)
Length = 241
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 33 CICIFKKDGKFVRCDDCKCDENGKCDKTECFCIQTEGKPCICLCSDDKGNIKVCD-DCSC 209
C+ DG DC D +C K+ C C++ +PCI ++G+ + CD D C
Sbjct: 43 CLARLSCDGSCSAHMDCDQDYGEECIKSRCRCVR---EPCI----TERGDKQECDRDADC 95
>SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6753
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +2
Query: 272 GKSCICICKKD--GKFVRCDDCKCDENGKCDKTECFCIQTEGKPCICLCSDDK 424
G+ C C++ GK D +C + CD + CI T G C+C+ DK
Sbjct: 3597 GEDYNCTCRQGLIGKQCEIDIDECKNSSTCDSGK-VCINTYGSHA-CVCNGDK 3647
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 21 EGKSCICIFKKDGKFVRCDDCKCDENGKCDKTECFCIQTEGKPCICLCSDDK 176
E +C C GK D +C + CD + CI T G C+C+ DK
Sbjct: 3598 EDYNCTCRQGLIGKQCEIDIDECKNSSTCDSGK-VCINTYGSHA-CVCNGDK 3647
>SB_52909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 55
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +3
Query: 102 KCDKTECFCIQTEGKPCICL-CSDDKGNIKVCDDCSCTPAQSKELKCD 242
KC+ +C C++ EG C + C K C+ C + + +KC+
Sbjct: 7 KCECVKCECVKCEGVKCEGVKCEGVKCEGVKCEGVKCEGVKCEGVKCE 54
>SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1387
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +2
Query: 278 SCICICKKDGKFVRCDDCKCDENGKCDKTECFCIQTEGKPC--ICL--CSDD 421
+C+ C K GK +R C CD + + EC + +PC C C+DD
Sbjct: 805 NCVNGCSKHGKCIR-GFCICDHSHYFNGAECAPYKISHRPCPEACAKRCTDD 855
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/19 (57%), Positives = 11/19 (57%), Gaps = 1/19 (5%)
Frame = +3
Query: 75 DDCK-CDENGKCDKTECFC 128
DDC C N KC K EC C
Sbjct: 645 DDCNGCHHNAKCVKKECIC 663
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/19 (57%), Positives = 11/19 (57%), Gaps = 1/19 (5%)
Frame = +2
Query: 323 DDCK-CDENGKCDKTECFC 376
DDC C N KC K EC C
Sbjct: 645 DDCNGCHHNAKCVKKECIC 663
>SB_471| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 587
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 7/64 (10%)
Frame = +3
Query: 81 CKCDENGKCDKT------ECFCIQTE-GKPCICLCSDDKGNIKVCDDCSCTPAQSKELKC 239
C+CD G D + +C C + G+ C C C C C+P S C
Sbjct: 341 CECDPKGALDASCSKFGGQCTCRRNVVGRKCD-RCMASYTGFPNCRKCECSPVGSVSPDC 399
Query: 240 DKSG 251
D +G
Sbjct: 400 DVTG 403
>SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 921
Score = 28.7 bits (61), Expect = 3.2
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +2
Query: 254 LCVPTEGKSCICICKKDGKFVRCDDCKCDENGKCDKTECFCIQTEGKPCICLCSDDKGNI 433
+C+ G S C C K G F++ D+ C D ECF + G C LC + +G+
Sbjct: 326 VCINNPG-SYACACHK-GFFLKLDERSC-----ADLDECFLLNNGG--CSQLCLNTQGSY 376
Query: 434 K 436
+
Sbjct: 377 R 377
Score = 27.5 bits (58), Expect = 7.3
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +3
Query: 6 VCVPTEGK-SCICIFKKDGKFVRCDDCKCDENGKCDKTECFCIQTEGKPCICLCSDDKGN 182
VC+ G +C C G F++ D+ C D ECF + G C LC + +G+
Sbjct: 326 VCINNPGSYACAC---HKGFFLKLDERSC-----ADLDECFLLNNGG--CSQLCLNTQGS 375
Query: 183 IK-VCD 197
+ CD
Sbjct: 376 YRCACD 381
>SB_49286| Best HMM Match : Laminin_N (HMM E-Value=0)
Length = 1465
Score = 28.7 bits (61), Expect = 3.2
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 8/76 (10%)
Frame = +3
Query: 72 CDDCKCDENGKCDKT------ECFCIQ-TEGKPCICLCSDDKGNIKV-CDDCSCTPAQSK 227
C+ C CD G + T +C C G+ C D ++ C C+C S
Sbjct: 1030 CEPCNCDTTGSWNNTCSVTTGQCHCKPGVTGRRCDQCSIDHYAFSELGCLACNCNLQGSL 1089
Query: 228 ELKCDKSGCFVYQLKE 275
+ CD+ G + +L +
Sbjct: 1090 NVTCDEQGEEIMKLND 1105
>SB_27398| Best HMM Match : DUF1096 (HMM E-Value=2.3)
Length = 200
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +2
Query: 275 KSCICICKKDGKFVRCDDCKCDENGKCDKTECFCIQTEGKPCICLCSD 418
K+C C + K +D KC ++ C+ CIQ PC C +
Sbjct: 139 KACRMKCYTESKLCMNNDSKCFDSQSCNS----CIQQVYSPCFNRCQE 182
>SB_9510| Best HMM Match : Keratin_B2 (HMM E-Value=3.8e-05)
Length = 500
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/66 (27%), Positives = 22/66 (33%), Gaps = 1/66 (1%)
Frame = +3
Query: 60 KFVRCDDCKCDENGKCDKTECFCIQTEGKPCICL-CSDDKGNIKVCDDCSCTPAQSKELK 236
K C D C + G C C + C C D C D C A K+
Sbjct: 357 KDAACKDAGCKDAG-CKDAGCKDAGCKDAGCKDAGCKDAGCKDAACKDAGCKDAGCKDAG 415
Query: 237 CDKSGC 254
C +GC
Sbjct: 416 CKDAGC 421
Score = 28.7 bits (61), Expect = 3.2
Identities = 17/62 (27%), Positives = 21/62 (33%), Gaps = 1/62 (1%)
Frame = +3
Query: 72 CDDCKCDENGKCDKTECFCIQTEGKPCICL-CSDDKGNIKVCDDCSCTPAQSKELKCDKS 248
C D C + G C C + C C D C D C A K+ C +
Sbjct: 426 CKDAGCKDAG-CKDAGCKDAACKDAGCKDAGCKDAGCKDAACKDAGCKDAGCKDAGCKDA 484
Query: 249 GC 254
GC
Sbjct: 485 GC 486
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/61 (27%), Positives = 21/61 (34%)
Frame = +3
Query: 72 CDDCKCDENGKCDKTECFCIQTEGKPCICLCSDDKGNIKVCDDCSCTPAQSKELKCDKSG 251
C D C + G C C + C D G C D C A K+ C +G
Sbjct: 331 CKDAGCKDAG-CKDAGCKDAGCKDAGCKDAACKDAG----CKDAGCKDAGCKDAGCKDAG 385
Query: 252 C 254
C
Sbjct: 386 C 386
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/61 (27%), Positives = 21/61 (34%)
Frame = +3
Query: 72 CDDCKCDENGKCDKTECFCIQTEGKPCICLCSDDKGNIKVCDDCSCTPAQSKELKCDKSG 251
C D C + G C C + C D G C D C A K+ C +G
Sbjct: 371 CKDAGCKDAG-CKDAGCKDAGCKDAGCKDAACKDAG----CKDAGCKDAGCKDAGCKDAG 425
Query: 252 C 254
C
Sbjct: 426 C 426
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/62 (27%), Positives = 21/62 (33%), Gaps = 1/62 (1%)
Frame = +3
Query: 72 CDDCKCDENGKCDKTECFCIQTEGKPCICL-CSDDKGNIKVCDDCSCTPAQSKELKCDKS 248
C D C + G C C + C C D C D C A K+ C +
Sbjct: 431 CKDAGCKDAG-CKDAACKDAGCKDAGCKDAGCKDAACKDAGCKDAGCKDAGCKDAGCKDA 489
Query: 249 GC 254
GC
Sbjct: 490 GC 491
Score = 27.5 bits (58), Expect = 7.3
Identities = 17/61 (27%), Positives = 21/61 (34%)
Frame = +3
Query: 72 CDDCKCDENGKCDKTECFCIQTEGKPCICLCSDDKGNIKVCDDCSCTPAQSKELKCDKSG 251
C D C + G C C + C D G C D C A K+ C +G
Sbjct: 396 CKDAACKDAG-CKDAGCKDAGCKDAGCKDAGCKDAG----CKDAGCKDAGCKDAACKDAG 450
Query: 252 C 254
C
Sbjct: 451 C 451
Score = 27.5 bits (58), Expect = 7.3
Identities = 17/61 (27%), Positives = 21/61 (34%)
Frame = +3
Query: 72 CDDCKCDENGKCDKTECFCIQTEGKPCICLCSDDKGNIKVCDDCSCTPAQSKELKCDKSG 251
C D C + G C C + C D G C D C A K+ C +G
Sbjct: 441 CKDAACKDAG-CKDAGCKDAGCKDAACKDAGCKDAG----CKDAGCKDAGCKDAGCKDAG 495
Query: 252 C 254
C
Sbjct: 496 C 496
>SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16)
Length = 705
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +2
Query: 275 KSC-ICICKKDGKFVRCDDCKCDENGKC 355
K C +C+CK DG+ C KC+ GKC
Sbjct: 256 KDCQLCVCK-DGQLTNCTGQKCN-TGKC 281
>SB_21938| Best HMM Match : Big_2 (HMM E-Value=0.69)
Length = 651
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 316 NEFPIFLANANARLSFSWYTKQPDLSHFSS 227
+E P ANA L F+W + PD+ H S
Sbjct: 104 DESPFAFANAVPGLVFNWKSNNPDVCHLKS 133
>SB_9221| Best HMM Match : Cornifin (HMM E-Value=6.7)
Length = 856
Score = 28.7 bits (61), Expect = 3.2
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -3
Query: 447 HRHTFILPLSSLHRQIQGFPSVCIQKHSVLSHLPFSSHLQ--SSQRTNFPSFLQMQMQ 280
HR+T +L S+L+ +I G+ C K S + H Q SS+ + +P + + Q
Sbjct: 698 HRNTRVL--STLYIEIPGYYQPCTSKTSAYPDIQIPGHFQPSSSKTSEYPGTINLVHQ 753
>SB_552| Best HMM Match : Laminin_EGF (HMM E-Value=1.3e-23)
Length = 198
Score = 28.7 bits (61), Expect = 3.2
Identities = 22/80 (27%), Positives = 29/80 (36%), Gaps = 10/80 (12%)
Frame = +3
Query: 33 CICIFKKDGKFVRCDDCKCDENGK----CDKT--ECFCIQ-TEGKPCICLCSDDKGNI-- 185
C+ F + C C C + G C+ +C C G C C D N
Sbjct: 114 CVSGFHGNATAKTCQACNCTDRGSKHGVCNNVTGQCDCHPLVTGLSCE-RCVKDAFNYTS 172
Query: 186 -KVCDDCSCTPAQSKELKCD 242
K C C C P S + +CD
Sbjct: 173 GKGCTACGCHPQGSNDTQCD 192
>SB_53740| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 1980
Score = 28.3 bits (60), Expect = 4.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 69 RCDDCKCDENGKCDKTECFCIQTEG 143
RC+ EN +C K CFC+ G
Sbjct: 586 RCNQYGAYENVQCIKDSCFCVNNHG 610
Score = 28.3 bits (60), Expect = 4.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 317 RCDDCKCDENGKCDKTECFCIQTEG 391
RC+ EN +C K CFC+ G
Sbjct: 586 RCNQYGAYENVQCIKDSCFCVNNHG 610
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 290 ICKKDGKFVRCDDCKCDENGKCDKTECFCIQTEGK 394
+CK+DG+F ++ +C + D +EC+C+ EG+
Sbjct: 448 LCKQDGRF---EEVQC----RGDVSECWCVDHEGQ 475
>SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013)
Length = 665
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -3
Query: 447 HRHTFILPLSSLHRQIQGFPSVCIQKHSVLSHLPFSSHL 331
HRH P SS+ + +P+V I +V+ H P SS +
Sbjct: 545 HRHHLYPPSSSIPHRHHPYPTVIILYTTVIIHTPPSSSI 583
>SB_25222| Best HMM Match : Flagellin_C (HMM E-Value=0.72)
Length = 418
Score = 28.3 bits (60), Expect = 4.2
Identities = 19/71 (26%), Positives = 25/71 (35%), Gaps = 5/71 (7%)
Frame = +3
Query: 72 CDDCKCDENGKCDKT--ECFC---IQTEGKPCICLCSDDKGNIKVCDDCSCTPAQSKELK 236
C DC C D T +C C + +G C C+ C DC C +
Sbjct: 273 CTDCGCATLVLLDGTSSDCGCAALVLLDGTSTDCGCASLVLLDGTCTDCGCAALVLLDGT 332
Query: 237 CDKSGCFVYQL 269
C GC + L
Sbjct: 333 CTDCGCAAFVL 343
>SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -2
Query: 283 ARLSFSWYTKQPDLSHFSSLD*AGVHE 203
AR+S +WY SHF SLD A V +
Sbjct: 50 ARISEAWYPGAKQTSHFDSLDAATVRK 76
>SB_2315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/63 (23%), Positives = 26/63 (41%)
Frame = +3
Query: 66 VRCDDCKCDENGKCDKTECFCIQTEGKPCICLCSDDKGNIKVCDDCSCTPAQSKELKCDK 245
+RC +CD +CD C ++ + LC + + CD C + ++CD
Sbjct: 1 MRCYAMRCDAM-RCDAMRCDAMRCDAM----LCDAMRCDAMRCDAMRCDAMRCDAMRCDA 55
Query: 246 SGC 254
C
Sbjct: 56 MRC 58
>SB_46360| Best HMM Match : EGF (HMM E-Value=0)
Length = 352
Score = 28.3 bits (60), Expect = 4.2
Identities = 22/86 (25%), Positives = 31/86 (36%), Gaps = 7/86 (8%)
Frame = +3
Query: 3 CVCVPTEGKSCICIFKKDGKFVR---CDDCKCDENGKCDKT----ECFCIQTEGKPCICL 161
C P +G SC C G+ CD C NG C T +C C + P
Sbjct: 177 CRMDPLKGYSCSCPTGVTGRHCDVSICDSKPCRNNGSCVLTQSGYQCLCASSFTSPQCQR 236
Query: 162 CSDDKGNIKVCDDCSCTPAQSKELKC 239
DD + + +C + + KC
Sbjct: 237 SIDDCEHAHCLNGATCVDSDN-AYKC 261
>SB_32722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +3
Query: 33 CICIFKKDGKFVRCDDC-KCDENGKCDKTECFCIQ 134
C C + +G D C KCD + C +C C++
Sbjct: 374 CACGVQFEGNQCEIDKCAKCDMHATCRNGKCVCME 408
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 281 CICICKKDGKFVRCDDC-KCDENGKCDKTECFCIQ 382
C C + +G D C KCD + C +C C++
Sbjct: 374 CACGVQFEGNQCEIDKCAKCDMHATCRNGKCVCME 408
>SB_23967| Best HMM Match : SRCR (HMM E-Value=5.4e-11)
Length = 3369
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +3
Query: 39 CIFKKDGKFVRCDDCKCDEN-GKCDKTE 119
C + GK+ RC+ C D N G CD +
Sbjct: 2314 CTYSYCGKYTRCNTCNQDPNCGWCDSAQ 2341
>SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 441
Score = 28.3 bits (60), Expect = 4.2
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +3
Query: 72 CDDCKCDENGKCDKTECFCIQTEGKPCICLCSDD-KGNIKVCDDCSCTPAQSK--ELKCD 242
C C +GKCD++ C +G+ C CS+ K + C T +S+ + C
Sbjct: 224 CQQVVCSASGKCDQS-C-----DGEGCNLYCSEGAKTCNQKCQGACVTDCKSRWCGVTCT 277
Query: 243 KSGCFV 260
SGC V
Sbjct: 278 GSGCDV 283
>SB_6077| Best HMM Match : EGF (HMM E-Value=0)
Length = 1165
Score = 28.3 bits (60), Expect = 4.2
Identities = 22/86 (25%), Positives = 31/86 (36%), Gaps = 7/86 (8%)
Frame = +3
Query: 3 CVCVPTEGKSCICIFKKDGKFVR---CDDCKCDENGKCDKT----ECFCIQTEGKPCICL 161
C P +G SC C G+ CD C NG C T +C C + P
Sbjct: 990 CRMDPLKGYSCSCPTGVTGRHCDVSICDSKPCRNNGSCVLTQSGYQCLCASSFTSPQCQR 1049
Query: 162 CSDDKGNIKVCDDCSCTPAQSKELKC 239
DD + + +C + + KC
Sbjct: 1050 SIDDCEHAHCLNGATCVDSDN-AYKC 1074
>SB_5218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 28.3 bits (60), Expect = 4.2
Identities = 22/92 (23%), Positives = 35/92 (38%), Gaps = 5/92 (5%)
Frame = +3
Query: 6 VCVPTEGKSCICIFKKDGKFVRCDDCKCDENGKCDKTECFCIQTEGKPC-ICLCSDDKGN 182
+C E C F+ V DDC + C+ T+C IQ C C+ + N
Sbjct: 115 ICHGNESSLEYCKFQN----VSDDDCSHQRDAGCNTTQCNTIQGNTAQCNTAQCNTTQCN 170
Query: 183 IKVCD----DCSCTPAQSKELKCDKSGCFVYQ 266
C+ + + AQ ++C+ C Q
Sbjct: 171 TAQCNTIQGNTARNTAQCNTIQCNTLQCNTIQ 202
>SB_56788| Best HMM Match : 7tm_1 (HMM E-Value=4e-32)
Length = 524
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -1
Query: 422 CHRYTDKYKVFLQSVYRNIPFYHICHFHHICSRHSERISHLSCKCKCK 279
CH D+Y V + R I + IC++H+ I ++S C K
Sbjct: 60 CH---DQYNVVAEDFERGIRLREVYQKRIICAKHTSIIGNISLHCVTK 104
>SB_27229| Best HMM Match : 7tm_1 (HMM E-Value=0.0014)
Length = 309
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -1
Query: 422 CHRYTDKYKVFLQSVYRNIPFYHICHFHHICSRHSERISHLSCKCKCK 279
CH D+Y V + R I + IC++H+ I ++S C K
Sbjct: 52 CH---DQYNVVAEDFERGIRLREVYQKRIICAKHTSIIGNISLHCVTK 96
>SB_21099| Best HMM Match : Thyroglobulin_1 (HMM E-Value=1e-25)
Length = 137
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 290 ICKKDGKFVRCDDCKCDENGKCDKTECFCIQTEGK 394
+CK+DG+F ++ +C + D +EC+C+ EG+
Sbjct: 93 LCKQDGRF---EEVQC----RGDVSECWCVDHEGQ 120
>SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1530
Score = 27.5 bits (58), Expect = 7.3
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 8/51 (15%)
Frame = +2
Query: 272 GKSCI---CICKKDGKFVRCDDCKCD----ENGKCDKTECFCI-QTEGKPC 400
G SCI C+C C++ CD +G C+ C C Q GK C
Sbjct: 281 GGSCINGKCVCAVGFTGNTCEERLCDPPCQNSGTCNNGTCICTKQYTGKSC 331
>SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 87 CDENGKCDKTECFCIQTEGKPCICLCSDDKGNIKVCDDC 203
CD + T C C+ G C C+C G + CD+C
Sbjct: 1176 CDGCDRGYHTYC-CMAAGGDNC-CVCGGPAGKMAKCDNC 1212
>SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -2
Query: 307 PIFLANANARLSFSWYTKQPDLSH 236
P F AN+ R SFSW K P H
Sbjct: 61 PDFHANSKTRRSFSWRKKSPAKRH 84
>SB_14021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 27.5 bits (58), Expect = 7.3
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -3
Query: 216 QEYMSNHRIPLYYLCHRYTDKYKVFLQ-SVYRNIPFYHICHFHHICSRHSER 64
Q+ + R LY+ HR +YK S++R P H + HH +RH ++
Sbjct: 120 QKPPDHDRSLLYHHTHRQRSQYKPRENDSLHRRKPLDHERYQHHQTTRHDDQ 171
Score = 27.1 bits (57), Expect = 9.7
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -1
Query: 434 LYYLCHRYTDKYKVFLQ-SVYRNIPFYHICHFHHICSRHSER 312
LY+ HR +YK S++R P H + HH +RH ++
Sbjct: 130 LYHHTHRQRSQYKPRENDSLHRRKPLDHERYQHHQTTRHDDQ 171
>SB_30923| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 642
Score = 27.5 bits (58), Expect = 7.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 257 CVPTEGKSCICICKKDGKFVRCDDCKCDENGK 352
C+ +GK+ +C CK V C +C C + K
Sbjct: 382 CMNDKGKA-VCRCKGKWTGVTCRECSCPKGNK 412
>SB_22642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1574
Score = 27.5 bits (58), Expect = 7.3
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2
Query: 287 CICKKDGKFVRCDDCK 334
CICK++ VRCD CK
Sbjct: 1437 CICKRNVGGVRCDRCK 1452
>SB_7007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 608
Score = 27.5 bits (58), Expect = 7.3
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Frame = +3
Query: 39 CIFKKDG-KFVRCD-----DCKC-DENGKCDKTECFCIQTEGKPCIC-LCSDDKGNIKVC 194
C+F + G K +RC+ +C D+N K +C + C CS GN+K C
Sbjct: 12 CVFTEGGPKCLRCNIAEYCSAQCRDDNQWRHKVDC---DNVSRQLYCHKCSQKGGNMKQC 68
Query: 195 DDCSCTPAQSKELKCDKSG 251
+C SKE + + G
Sbjct: 69 SNCLSAWYCSKECQGEAWG 87
>SB_52925| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 393
Score = 27.1 bits (57), Expect = 9.7
Identities = 19/51 (37%), Positives = 23/51 (45%)
Frame = +3
Query: 84 KCDENGKCDKTECFCIQTEGKPCICLCSDDKGNIKVCDDCSCTPAQSKELK 236
KCDE GK CFC K + S K + CD+C QSK L+
Sbjct: 257 KCDECGK-----CFCRPDNLKEHLITHSGQKPH--KCDECGKCFTQSKSLR 300
>SB_42661| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1717
Score = 27.1 bits (57), Expect = 9.7
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 272 GKSCICICKKDGKFVRCDDCKCDENGKCDKTECFCIQTEG-KPCIC 406
G + C+C C++ +C +GKC+ +C C + G K +C
Sbjct: 1633 GNASDCVCDACYSGSGCNE-ECSGHGKCEDGKCVCDKDLGYKGPVC 1677
>SB_31963| Best HMM Match : Integrin_beta (HMM E-Value=0)
Length = 628
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 281 CICICKKDGKFVRCDDCKCDENGKCDKTE 367
C C K GK+ C++C E G C ++E
Sbjct: 485 CTCTRKYSGKY--CEECPSCEGGICRRSE 511
>SB_25340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1105
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +3
Query: 69 RCDDCKCDENGKCDKTECFCIQTEGKPCICLCS 167
RC C C +C C C Q C C CS
Sbjct: 49 RCHSCACACWKRCHSCACACWQ-RCHSCACACS 80
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +2
Query: 317 RCDDCKCDENGKCDKTECFCIQTEGKPCICLCS 415
RC C C +C C C Q C C CS
Sbjct: 49 RCHSCACACWKRCHSCACACWQ-RCHSCACACS 80
>SB_16910| Best HMM Match : EGF (HMM E-Value=0)
Length = 1552
Score = 27.1 bits (57), Expect = 9.7
Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Frame = +3
Query: 33 CICIFKKDGKFVRCDDCKCDENGKCDKTECFCIQTEGKPCICLCSDDKGNI---KVCDDC 203
C+C G+ + D +C K K C+ G+ +CLC + K DDC
Sbjct: 1049 CVCPEGYSGRTCQLDFGQC--YSKPCKNNATCVDQVGEQFVCLCRNGWEGFYCDKNIDDC 1106
Query: 204 SCTP 215
+ P
Sbjct: 1107 ANNP 1110
>SB_8046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1304
Score = 27.1 bits (57), Expect = 9.7
Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 9/98 (9%)
Frame = +3
Query: 72 CDDCKCDENGK----C--DKTECFCIQTEGKPCICLCSDDKGNIKV---CDDCSCTPAQS 224
C C C+ G C D +C C + + C D N C C C S
Sbjct: 743 CKACACNMTGSKRSSCHPDTGKCECHPSITERQCSRCLDHYFNFTSGVGCQPCGCNELYS 802
Query: 225 KELKCDKSGCFVYQLKESLAFAFARKMGNSFAVTTANV 338
++L+CD + V K+ + A + ++F T V
Sbjct: 803 RDLQCD-NDTGVCSCKDGVGGAKCTECSDAFYNLTLKV 839
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 27.1 bits (57), Expect = 9.7
Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = +3
Query: 78 DCKCDENGKCDKTECFCIQTEGKPCICLCSDDKGNIKVCDDCSCT-PAQSKELKCDKSGC 254
D C + EC Q + L KG+ C+D CT P + E K DK+ C
Sbjct: 1589 DPVCASDNNTYPNECAMKQLACQSAKVLTFRRKGDCDPCNDFDCTAPYSTCEAKDDKAVC 1648
>SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5)
Length = 612
Score = 27.1 bits (57), Expect = 9.7
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = -3
Query: 198 HRIPLYYLCHRYTDKYKVFLQSVYRNIPFYHICHFHHICS-RH 73
H YY H Y + YR+ +YH C+ HH C RH
Sbjct: 27 HHRYCYYRHHHYCWYRHHYHYPCYRH--YYHRCYRHHYCCYRH 67
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,996,211
Number of Sequences: 59808
Number of extensions: 450117
Number of successful extensions: 2007
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1945
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1215643300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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