Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20205
         (540 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9CPI1 Cluster: PfhB1; n=1; Pasteurella multocida|Rep: ...    33   5.6  
UniRef50_A2EZH9 Cluster: Putative uncharacterized protein; n=1; ...    32   7.3  
UniRef50_A2ERV8 Cluster: Putative uncharacterized protein; n=1; ...    32   7.3  
UniRef50_Q9V1Y4 Cluster: Putative uncharacterized protein; n=1; ...    32   7.3  

>UniRef50_Q9CPI1 Cluster: PfhB1; n=1; Pasteurella multocida|Rep: PfhB1
            - Pasteurella multocida
          Length = 2615

 Score = 32.7 bits (71), Expect = 5.6
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = -2

Query: 266  QLSIIPYKTYKNRPVFVNLVLS*NLTESKINYLGTIFKSMKLFTRGL 126
            QL  I    YK    F N V S + TE K+N LG  +   +L TR +
Sbjct: 1226 QLKYINQDDYKGADYFFNQVASDSQTEQKVNVLGDNYFDHQLITRSI 1272


>UniRef50_A2EZH9 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 2141

 Score = 32.3 bits (70), Expect = 7.3
 Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
 Frame = -2

Query: 398 WALSREPRLHSRLYNILYNLILSKETPDEPSKHIRKTFN*YSINQLSIIPYKTYKNRPVF 219
           +A S  P+L SR  NIL NL  S     +  K I++T   +S   +S   YK      + 
Sbjct: 603 YACSHNPQLCSRFNNILDNL-FSYGLKRKSDKVIQQTLKIFSFITMSFPKYKLSSKYFMQ 661

Query: 218 VNLVLS*NLTESK----INYLGTIFKSMKLFTRG 129
           +N ++  N+++S     ++ LG I  +    + G
Sbjct: 662 INEIIKKNISDSSYKSILSSLGNIISNSNTLSYG 695


>UniRef50_A2ERV8 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 184

 Score = 32.3 bits (70), Expect = 7.3
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
 Frame = -2

Query: 329 KETPDEPSKHIRKTFN*YSINQ-LSIIPYKTYKNRPVFVNLVLS*NLTESKINYLGTIFK 153
           KET + P KH R +      NQ L+ +     + RPVF +L +  +   SKI Y  T+F 
Sbjct: 77  KETLNLPKKHRRSSLKHSESNQALAELEGNQERPRPVFEDLQIFPSKPTSKIEYKDTLFS 136

Query: 152 SMKLFTR 132
             +  T+
Sbjct: 137 RFEADTQ 143


>UniRef50_Q9V1Y4 Cluster: Putative uncharacterized protein; n=1;
           Pyrococcus abyssi|Rep: Putative uncharacterized protein
           - Pyrococcus abyssi
          Length = 111

 Score = 32.3 bits (70), Expect = 7.3
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = +1

Query: 1   DNWRKVVRRKKTHWETRXRPRYLTSQRN*GKPHTDTRARSPTKPLVNNFIDLNI 162
           DNW+ V  +KK  WE+R  P+ +       +P+TD+     + P +N    L I
Sbjct: 42  DNWKVV--KKKNIWESRIEPKIVGIFEVVSEPYTDSSRNFKSPPHLNETSPLRI 93


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 476,359,802
Number of Sequences: 1657284
Number of extensions: 8552117
Number of successful extensions: 16965
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16949
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34572633001
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)