Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20205
         (540 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   5.2  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   5.2  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   5.2  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   5.2  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   5.2  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   6.9  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   9.2  

>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 353 ILYNLILSKETPDEPSKHIRKTF 285
           + YN  + ++  DE S+ IRK +
Sbjct: 352 LYYNYTVDRDLQDEVSQKIRKYY 374


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 353 ILYNLILSKETPDEPSKHIRKTF 285
           + YN  + ++  DE S+ IRK +
Sbjct: 352 LYYNYTVDRDLQDEVSQKIRKYY 374


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 353 ILYNLILSKETPDEPSKHIRKTF 285
           + YN  + ++  DE S+ IRK +
Sbjct: 352 LYYNYTVDRDLQDEVSQKIRKYY 374


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 353 ILYNLILSKETPDEPSKHIRKTF 285
           + YN  + ++  DE S+ IRK +
Sbjct: 352 LYYNYTVDRDLQDEVSQKIRKYY 374


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 353 ILYNLILSKETPDEPSKHIRKTF 285
           + YN  + ++  DE S+ IRK +
Sbjct: 352 LYYNYTVDRDLQDEVSQKIRKYY 374


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +3

Query: 291 FSDVFRWLVGRLLREYEIVQYIIKT*V*SWL 383
           F D F + V  +L  +  V ++  T V  W+
Sbjct: 435 FLDAFLYWVDEILANHNDVYFVTMTQVIQWI 465


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +1

Query: 13  KVVRRKKTHWETRXRPRYLTSQRN*GKPHTDT 108
           KV    +TH   +  P Y    +   KPH +T
Sbjct: 411 KVTSDTRTHQFAKFMPLYSGPYKIIAKPHPNT 442


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,176
Number of Sequences: 336
Number of extensions: 2222
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)