Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20205
         (540 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC033039-1|AAH33039.1|  927|Homo sapiens LGR4 protein protein.         30   4.5  
AF346711-1|AAK31153.1|  951|Homo sapiens G-protein couple recept...    30   4.5  
AF257182-1|AAF68989.1|  951|Homo sapiens G-protein-coupled recep...    30   4.5  
AB209743-1|BAD92980.1| 1032|Homo sapiens Leucine-rich repeat-con...    30   4.5  
BC099650-1|AAH99650.1|  907|Homo sapiens leucine-rich repeat-con...    30   6.0  
BC096326-1|AAH96326.1|  883|Homo sapiens LGR5 protein protein.         30   6.0  
BC096325-1|AAH96325.1|  883|Homo sapiens LGR5 protein protein.         30   6.0  
BC096324-1|AAH96324.1|  907|Homo sapiens leucine-rich repeat-con...    30   6.0  
AF062006-1|AAC28019.1|  907|Homo sapiens orphan G protein-couple...    30   6.0  
AF061444-1|AAC77911.1|  907|Homo sapiens G protein-coupled recep...    30   6.0  

>BC033039-1|AAH33039.1|  927|Homo sapiens LGR4 protein protein.
          Length = 927

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 133 GVWWGTARGCQCVAFLSFFA 74
           G+WW T  GC+   FL+ F+
Sbjct: 585 GIWWETGSGCKVAGFLAVFS 604


>AF346711-1|AAK31153.1|  951|Homo sapiens G-protein couple receptor
           protein.
          Length = 951

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 133 GVWWGTARGCQCVAFLSFFA 74
           G+WW T  GC+   FL+ F+
Sbjct: 609 GIWWETGSGCKVAGFLAVFS 628


>AF257182-1|AAF68989.1|  951|Homo sapiens G-protein-coupled receptor
           48 protein.
          Length = 951

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 133 GVWWGTARGCQCVAFLSFFA 74
           G+WW T  GC+   FL+ F+
Sbjct: 609 GIWWETGSGCKVAGFLAVFS 628


>AB209743-1|BAD92980.1| 1032|Homo sapiens Leucine-rich
           repeat-containing G protein-coupled receptor 4 precursor
           variant protein.
          Length = 1032

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 133 GVWWGTARGCQCVAFLSFFA 74
           G+WW T  GC+   FL+ F+
Sbjct: 690 GIWWETGSGCKVAGFLAVFS 709


>BC099650-1|AAH99650.1|  907|Homo sapiens leucine-rich
           repeat-containing G protein-coupled receptor 5 protein.
          Length = 907

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -3

Query: 133 GVWWGTARGCQCVAFLSFFA 74
           G WW    GC  + FLS FA
Sbjct: 628 GAWWENGVGCHVIGFLSIFA 647


>BC096326-1|AAH96326.1|  883|Homo sapiens LGR5 protein protein.
          Length = 883

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -3

Query: 133 GVWWGTARGCQCVAFLSFFA 74
           G WW    GC  + FLS FA
Sbjct: 604 GAWWENGVGCHVIGFLSIFA 623


>BC096325-1|AAH96325.1|  883|Homo sapiens LGR5 protein protein.
          Length = 883

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -3

Query: 133 GVWWGTARGCQCVAFLSFFA 74
           G WW    GC  + FLS FA
Sbjct: 604 GAWWENGVGCHVIGFLSIFA 623


>BC096324-1|AAH96324.1|  907|Homo sapiens leucine-rich
           repeat-containing G protein-coupled receptor 5 protein.
          Length = 907

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -3

Query: 133 GVWWGTARGCQCVAFLSFFA 74
           G WW    GC  + FLS FA
Sbjct: 628 GAWWENGVGCHVIGFLSIFA 647


>AF062006-1|AAC28019.1|  907|Homo sapiens orphan G protein-coupled
           receptor HG38 protein.
          Length = 907

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -3

Query: 133 GVWWGTARGCQCVAFLSFFA 74
           G WW    GC  + FLS FA
Sbjct: 628 GAWWENGVGCHVIGFLSIFA 647


>AF061444-1|AAC77911.1|  907|Homo sapiens G protein-coupled receptor
           LGR5 protein.
          Length = 907

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -3

Query: 133 GVWWGTARGCQCVAFLSFFA 74
           G WW    GC  + FLS FA
Sbjct: 628 GAWWENGVGCHVIGFLSIFA 647


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,181,407
Number of Sequences: 237096
Number of extensions: 1213704
Number of successful extensions: 2238
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2238
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)