Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20205
         (540 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g67310.1 68418.m08488 cytochrome P450 family protein                31   0.37 
At1g63530.1 68414.m07182 hypothetical protein                          27   6.1  
At1g30860.1 68414.m03774 expressed protein                             27   8.0  

>At5g67310.1 68418.m08488 cytochrome P450 family protein
          Length = 507

 Score = 31.5 bits (68), Expect = 0.37
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -2

Query: 392 LSREPRLHSRLYNILYNLILSKETPDEPSKHIRK 291
           L  +P L+   YNIL +++  K   DE +K +RK
Sbjct: 184 LKLQPFLYGLTYNILMSMVAGKREEDEETKEVRK 217


>At1g63530.1 68414.m07182 hypothetical protein
          Length = 499

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 17/41 (41%), Positives = 20/41 (48%)
 Frame = -1

Query: 129 FGGGPRAGVSVWLSLVSLRC*VAWPXTSLPVSFLPPNYLPP 7
           FG  P A  SV +S  S         T  P+SFLP  Y+PP
Sbjct: 74  FGSAPAATTSVGVSSTS---------TPTPISFLPFGYVPP 105


>At1g30860.1 68414.m03774 expressed protein
          Length = 730

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 13/51 (25%), Positives = 23/51 (45%)
 Frame = +1

Query: 1   DNWRKVVRRKKTHWETRXRPRYLTSQRN*GKPHTDTRARSPTKPLVNNFID 153
           D+W   + R +++WE   + RYL       +   D   R   +  V +F+D
Sbjct: 479 DDWLSEIARPRSYWEELRKSRYLEVMNT--RSEKDDICRLLERRTVTDFLD 527


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,172,823
Number of Sequences: 28952
Number of extensions: 187501
Number of successful extensions: 335
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 335
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1003808112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)