Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20202
         (590 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    26   1.0  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    26   1.0  
AY341209-1|AAR13773.1|  196|Anopheles gambiae SP14D1 protein.          25   1.4  
AY341208-1|AAR13772.1|  196|Anopheles gambiae SP14D1 protein.          25   1.4  
AY341207-1|AAR13771.1|  196|Anopheles gambiae SP14D1 protein.          25   1.4  
AY341206-1|AAR13770.1|  196|Anopheles gambiae SP14D1 protein.          25   1.4  
AF007166-1|AAB62929.1|  360|Anopheles gambiae serine protease 14...    25   1.4  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   9.8  

>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 25.8 bits (54), Expect = 1.0
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -2

Query: 289 KSCIECASLAHYSTVVSSEKKSLTYAPPIRILHS 188
           K+CI C +  H +   ++E K    + P R+ HS
Sbjct: 385 KACIRCGAEGHLAKDCNAEVKCAVCSGPHRVGHS 418


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 25.8 bits (54), Expect = 1.0
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -2

Query: 289 KSCIECASLAHYSTVVSSEKKSLTYAPPIRILH 191
           ++CI C +  HY+   +SE K      P RI H
Sbjct: 411 QACIRCGADGHYAKSCTSEIKCAACNGPHRIGH 443


>AY341209-1|AAR13773.1|  196|Anopheles gambiae SP14D1 protein.
          Length = 196

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +1

Query: 478 GPQSCGAPDGPG 513
           GPQ CGAP  PG
Sbjct: 168 GPQKCGAPGVPG 179


>AY341208-1|AAR13772.1|  196|Anopheles gambiae SP14D1 protein.
          Length = 196

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +1

Query: 478 GPQSCGAPDGPG 513
           GPQ CGAP  PG
Sbjct: 168 GPQKCGAPGVPG 179


>AY341207-1|AAR13771.1|  196|Anopheles gambiae SP14D1 protein.
          Length = 196

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +1

Query: 478 GPQSCGAPDGPG 513
           GPQ CGAP  PG
Sbjct: 168 GPQKCGAPGVPG 179


>AY341206-1|AAR13770.1|  196|Anopheles gambiae SP14D1 protein.
          Length = 196

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +1

Query: 478 GPQSCGAPDGPG 513
           GPQ CGAP  PG
Sbjct: 168 GPQKCGAPGVPG 179


>AF007166-1|AAB62929.1|  360|Anopheles gambiae serine protease 14D
           protein.
          Length = 360

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +1

Query: 478 GPQSCGAPDGPG 513
           GPQ CGAP  PG
Sbjct: 332 GPQKCGAPGVPG 343


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -1

Query: 512 PGPSGAPQDCGP 477
           PGP G P D GP
Sbjct: 148 PGPPGYPGDVGP 159


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 561,876
Number of Sequences: 2352
Number of extensions: 10719
Number of successful extensions: 25
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)