Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20202
         (590 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023836-1|AAZ86757.1| 1199|Drosophila melanogaster LD18215p pro...    28   8.2  
BT011109-1|AAR82776.1| 1190|Drosophila melanogaster LD47325p pro...    28   8.2  
AE013599-1009|AAF58849.1| 1199|Drosophila melanogaster CG1371-PA...    28   8.2  

>BT023836-1|AAZ86757.1| 1199|Drosophila melanogaster LD18215p
           protein.
          Length = 1199

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -3

Query: 345 SRNTTVSKNSCILSGKPVVKAVLSAPPWPTTVPLYLQKKK 226
           S NT +  NS ++SG  VV    S+ P P  + + L KKK
Sbjct: 190 SGNTELPANSLVVSGFDVVGRFDSSSPLPGNLGVALYKKK 229


>BT011109-1|AAR82776.1| 1190|Drosophila melanogaster LD47325p
           protein.
          Length = 1190

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -3

Query: 345 SRNTTVSKNSCILSGKPVVKAVLSAPPWPTTVPLYLQKKK 226
           S NT +  NS ++SG  VV    S+ P P  + + L KKK
Sbjct: 181 SGNTELPANSLVVSGFDVVGRFDSSSPLPGNLGVALYKKK 220


>AE013599-1009|AAF58849.1| 1199|Drosophila melanogaster CG1371-PA
           protein.
          Length = 1199

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -3

Query: 345 SRNTTVSKNSCILSGKPVVKAVLSAPPWPTTVPLYLQKKK 226
           S NT +  NS ++SG  VV    S+ P P  + + L KKK
Sbjct: 190 SGNTELPANSLVVSGFDVVGRFDSSSPLPGNLGVALYKKK 229


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,897,957
Number of Sequences: 53049
Number of extensions: 444603
Number of successful extensions: 988
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)