Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20201
         (306 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   0.95 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   2.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   2.2  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   3.8  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    19   8.8  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    19   8.8  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    19   8.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 0.95
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = -3

Query: 214  PAPSTGLPQWCKSSWRP 164
            P  +T  P+W  + W P
Sbjct: 1360 PGSTTNYPEWQPTEWHP 1376


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 2.2
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -3

Query: 229 YPVLKPAPSTGLPQWCKSSWRPIS 158
           YP+L P  S     W   S  P+S
Sbjct: 174 YPILSPEMSQVAASWHTPSMYPLS 197



 Score = 19.8 bits (39), Expect = 6.7
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 207 GAGFRTGYNSA 239
           GAGFR+ Y SA
Sbjct: 199 GAGFRSPYPSA 209


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 2.2
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -3

Query: 229 YPVLKPAPSTGLPQWCKSSWRPIS 158
           YP+L P  S     W   S  P+S
Sbjct: 66  YPILSPEMSQVAASWHTPSMYPLS 89



 Score = 19.8 bits (39), Expect = 6.7
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 207 GAGFRTGYNSA 239
           GAGFR+ Y SA
Sbjct: 91  GAGFRSPYPSA 101


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = +1

Query: 58  ASAPPPSVSKQYRSDYVYNKDTNA--FYKL 141
           A +PPPS    + + Y Y    NA  ++KL
Sbjct: 26  AYSPPPSYCDPWYNPYYYQYLQNAALYHKL 55


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 21  EECFYLFLLFGDCQC 65
           +  + LFLLF  C C
Sbjct: 288 DSTYCLFLLFVFCDC 302


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 21  EECFYLFLLFGDCQC 65
           +  + LFLLF  C C
Sbjct: 288 DSTYCLFLLFVFCDC 302


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 21  EECFYLFLLFGDCQC 65
           +  + LFLLF  C C
Sbjct: 288 DSTYCLFLLFVFCDC 302


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,540
Number of Sequences: 336
Number of extensions: 1214
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5518292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)