Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20201
(306 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC059404-1|AAH59404.1| 480|Homo sapiens B-cell CLL/lymphoma 6, ... 29 2.7
BC028128-1|AAH28128.1| 460|Homo sapiens arginine decarboxylase ... 29 2.7
BC010449-1|AAH10449.1| 460|Homo sapiens ADC protein protein. 29 2.7
AY325129-1|AAQ62560.1| 460|Homo sapiens arginine decarboxylase ... 29 2.7
AY050635-1|AAL08050.1| 480|Homo sapiens ornithine decarboxylase... 29 2.7
AY050634-1|AAL08049.1| 460|Homo sapiens ornithine decarboxylase... 29 2.7
AL020995-5|CAI19355.1| 480|Homo sapiens arginine decarboxylase ... 29 2.7
AL020995-4|CAI19354.1| 460|Homo sapiens arginine decarboxylase ... 29 2.7
AK095127-1|BAC04489.1| 365|Homo sapiens OTRANSFERASE (EC 2.7.8.... 29 2.7
AK057051-1|BAB71356.1| 365|Homo sapiens protein ( Homo sapiens ... 29 2.7
AB076581-1|BAC00963.1| 480|Homo sapiens BAZF protein. 29 2.7
AB076580-1|BAC00962.1| 480|Homo sapiens BAZF protein. 29 2.7
AB075825-1|BAB85531.1| 420|Homo sapiens KIAA1945 protein protein. 29 2.7
L48925-1|AAA96327.1| 346|Homo sapiens latent transforming growt... 28 4.6
D28761-1|BAA05951.1| 287|Homo sapiens OPN-c protein. 28 4.6
BC093033-1|AAH93033.1| 287|Homo sapiens secreted phosphoprotein... 28 4.6
>BC059404-1|AAH59404.1| 480|Homo sapiens B-cell CLL/lymphoma 6,
member B (zinc finger protein) protein.
Length = 480
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -1
Query: 288 PPKHSSPDLXIFEHRMKLNYILF*SRHXQLGSLSGARALGVP 163
PP +SPD + K YI+ S+ Q GSL G R+ G P
Sbjct: 181 PPSPASPDPKACNWK-KYKYIVLNSQASQAGSLVGERSSGQP 221
>BC028128-1|AAH28128.1| 460|Homo sapiens arginine decarboxylase
protein.
Length = 460
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 226 PVLKPAPSTGLPQWCKSSWRPIS*RCQCV 140
P+L+ PST P + S W P C CV
Sbjct: 339 PILQKKPSTEQPLYSSSLWGPAVDGCDCV 367
>BC010449-1|AAH10449.1| 460|Homo sapiens ADC protein protein.
Length = 460
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 226 PVLKPAPSTGLPQWCKSSWRPIS*RCQCV 140
P+L+ PST P + S W P C CV
Sbjct: 339 PILQKKPSTEQPLYSSSLWGPAVDGCDCV 367
>AY325129-1|AAQ62560.1| 460|Homo sapiens arginine decarboxylase
protein.
Length = 460
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 226 PVLKPAPSTGLPQWCKSSWRPIS*RCQCV 140
P+L+ PST P + S W P C CV
Sbjct: 339 PILQKKPSTEQPLYSSSLWGPAVDGCDCV 367
>AY050635-1|AAL08050.1| 480|Homo sapiens ornithine
decarboxylase-like protein variant 2 protein.
Length = 480
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 226 PVLKPAPSTGLPQWCKSSWRPIS*RCQCV 140
P+L+ PST P + S W P C CV
Sbjct: 359 PILQKKPSTEQPLYSSSLWGPAVDGCDCV 387
>AY050634-1|AAL08049.1| 460|Homo sapiens ornithine
decarboxylase-like protein variant 1 protein.
Length = 460
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 226 PVLKPAPSTGLPQWCKSSWRPIS*RCQCV 140
P+L+ PST P + S W P C CV
Sbjct: 339 PILQKKPSTEQPLYSSSLWGPAVDGCDCV 367
>AL020995-5|CAI19355.1| 480|Homo sapiens arginine decarboxylase
protein.
Length = 480
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 226 PVLKPAPSTGLPQWCKSSWRPIS*RCQCV 140
P+L+ PST P + S W P C CV
Sbjct: 359 PILQKKPSTEQPLYSSSLWGPAVDGCDCV 387
>AL020995-4|CAI19354.1| 460|Homo sapiens arginine decarboxylase
protein.
Length = 460
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 226 PVLKPAPSTGLPQWCKSSWRPIS*RCQCV 140
P+L+ PST P + S W P C CV
Sbjct: 339 PILQKKPSTEQPLYSSSLWGPAVDGCDCV 367
>AK095127-1|BAC04489.1| 365|Homo sapiens OTRANSFERASE (EC
2.7.8.15). protein.
Length = 365
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 226 PVLKPAPSTGLPQWCKSSWRPIS*RCQCV 140
P+L+ PST P + S W P C CV
Sbjct: 244 PILQKKPSTEQPLYSSSLWGPAVDGCDCV 272
>AK057051-1|BAB71356.1| 365|Homo sapiens protein ( Homo sapiens
cDNA FLJ32489 fis, clone SKNSH1000174, moderately
similar to ORNITHINE DECARBOXYLASE (EC 4.1.1.17). ).
Length = 365
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 226 PVLKPAPSTGLPQWCKSSWRPIS*RCQCV 140
P+L+ PST P + S W P C CV
Sbjct: 244 PILQKKPSTEQPLYSSSLWGPAVDGCDCV 272
>AB076581-1|BAC00963.1| 480|Homo sapiens BAZF protein.
Length = 480
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -1
Query: 288 PPKHSSPDLXIFEHRMKLNYILF*SRHXQLGSLSGARALGVP 163
PP +SPD + K YI+ S+ Q GSL G R+ G P
Sbjct: 181 PPSPASPDPKACNWK-KYKYIVLNSQASQAGSLVGERSSGQP 221
>AB076580-1|BAC00962.1| 480|Homo sapiens BAZF protein.
Length = 480
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -1
Query: 288 PPKHSSPDLXIFEHRMKLNYILF*SRHXQLGSLSGARALGVP 163
PP +SPD + K YI+ S+ Q GSL G R+ G P
Sbjct: 181 PPSPASPDPKACNWK-KYKYIVLNSQASQAGSLVGERSSGQP 221
>AB075825-1|BAB85531.1| 420|Homo sapiens KIAA1945 protein protein.
Length = 420
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 226 PVLKPAPSTGLPQWCKSSWRPIS*RCQCV 140
P+L+ PST P + S W P C CV
Sbjct: 344 PILQKKPSTEQPLYSSSLWGPAVDGCDCV 372
>L48925-1|AAA96327.1| 346|Homo sapiens latent transforming growth
factor-binding protein protein.
Length = 346
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -3
Query: 238 AELYPVLKPAPSTGLPQWCKSSWRPIS 158
A++ LKP PS GLPQ S P+S
Sbjct: 268 AQMTLTLKPKPSVGLPQQIHSQVTPLS 294
>D28761-1|BAA05951.1| 287|Homo sapiens OPN-c protein.
Length = 287
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = +1
Query: 19 MKSAFICFCFLAIASAPP----PSVSKQYRSDYVYNKDTNAF 132
M+ A ICFC L I A P S S + + + V +++TN F
Sbjct: 1 MRIAVICFCLLGITCAIPVKQADSGSSEEKQNAVSSEETNDF 42
>BC093033-1|AAH93033.1| 287|Homo sapiens secreted phosphoprotein 1
(osteopontin, bone sialoprotein I, early T-lymphocyte
protein.
Length = 287
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = +1
Query: 19 MKSAFICFCFLAIASAPP----PSVSKQYRSDYVYNKDTNAF 132
M+ A ICFC L I A P S S + + + V +++TN F
Sbjct: 1 MRIAVICFCLLGITCAIPVKQADSGSSEEKQNAVSSEETNDF 42
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,438,519
Number of Sequences: 237096
Number of extensions: 764722
Number of successful extensions: 1681
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1681
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1342408202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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