Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20201
         (306 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001270-1|AAN71026.1|  623|Drosophila melanogaster AT04551p pro...    29   1.5  
AE013599-3412|AAF46861.2| 1301|Drosophila melanogaster CG4294-PA...    29   1.5  
BT001336-1|AAN71091.1|  684|Drosophila melanogaster AT20662p pro...    27   4.5  
AY060655-1|AAL28203.1|  556|Drosophila melanogaster GH08511p pro...    27   4.5  
AE014297-2558|AAN13781.1|  679|Drosophila melanogaster CG31231-P...    27   4.5  
AE014298-948|AAN09184.1| 3313|Drosophila melanogaster CG14438-PB...    27   6.0  
AE014298-947|AAF46197.2| 3313|Drosophila melanogaster CG14438-PA...    27   6.0  

>BT001270-1|AAN71026.1|  623|Drosophila melanogaster AT04551p
           protein.
          Length = 623

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +1

Query: 58  ASAPPPSVSKQYRSDYVYNKDTNAFYKLHTDSAKIWDAKSS 180
           +S PPP  +++ R DY +N+  N + + H     + D+  S
Sbjct: 73  SSPPPPVTTQRRRQDYHHNQLNNRYQRRHQQYFDLEDSLES 113


>AE013599-3412|AAF46861.2| 1301|Drosophila melanogaster CG4294-PA
           protein.
          Length = 1301

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +1

Query: 58  ASAPPPSVSKQYRSDYVYNKDTNAFYKLHTDSAKIWDAKSS 180
           +S PPP  +++ R DY +N+  N + + H     + D+  S
Sbjct: 172 SSLPPPVTTQRRRQDYHHNQLNNRYQRRHQQYFDLEDSLES 212


>BT001336-1|AAN71091.1|  684|Drosophila melanogaster AT20662p
           protein.
          Length = 684

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +1

Query: 67  PPPSVSKQYRSDYVYNKDTNAFYKLHTDSAKIWDAKSSCTTEGAQLXVPASEQ 225
           P P +S Q +SD   + D   F+K  TD+ +     SS + + A   + A+ +
Sbjct: 220 PEPELSAQDKSDTKADTDDGVFHKDGTDAGEGESGSSSGSDKDASTAINAAAE 272


>AY060655-1|AAL28203.1|  556|Drosophila melanogaster GH08511p
           protein.
          Length = 556

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +1

Query: 67  PPPSVSKQYRSDYVYNKDTNAFYKLHTDSAKIWDAKSSCTTEGAQLXVPASEQ 225
           P P +S Q +SD   + D   F+K  TD+ +     SS + + A   + A+ +
Sbjct: 92  PEPELSAQDKSDTKADTDDGVFHKDGTDAGEGESGSSSGSDKDASTAINAAAE 144


>AE014297-2558|AAN13781.1|  679|Drosophila melanogaster CG31231-PA
           protein.
          Length = 679

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +1

Query: 67  PPPSVSKQYRSDYVYNKDTNAFYKLHTDSAKIWDAKSSCTTEGAQLXVPASEQ 225
           P P +S Q +SD   + D   F+K  TD+ +     SS + + A   + A+ +
Sbjct: 215 PEPELSAQDKSDTKADTDDGVFHKDGTDAGEGESGSSSGSDKDASTAINAAAE 267


>AE014298-948|AAN09184.1| 3313|Drosophila melanogaster CG14438-PB,
           isoform B protein.
          Length = 3313

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = +1

Query: 46  FLAIASAPPPSVSKQYRSDYVYNKDTNAFYKLHTD-SAKIWDAKSSCTTEGAQLXVPASE 222
           FLA+         KQ  S+   +K+TN   +L T+ S + +   S  T   +++ V A  
Sbjct: 254 FLAVMQKALIEEKKQRASEQKTDKETNGVTQLETNFSRRSYTTSSQSTCRSSEISVRAEN 313

Query: 223 QD 228
            D
Sbjct: 314 PD 315


>AE014298-947|AAF46197.2| 3313|Drosophila melanogaster CG14438-PA,
           isoform A protein.
          Length = 3313

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = +1

Query: 46  FLAIASAPPPSVSKQYRSDYVYNKDTNAFYKLHTD-SAKIWDAKSSCTTEGAQLXVPASE 222
           FLA+         KQ  S+   +K+TN   +L T+ S + +   S  T   +++ V A  
Sbjct: 254 FLAVMQKALIEEKKQRASEQKTDKETNGVTQLETNFSRRSYTTSSQSTCRSSEISVRAEN 313

Query: 223 QD 228
            D
Sbjct: 314 PD 315


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,310,420
Number of Sequences: 53049
Number of extensions: 235954
Number of successful extensions: 665
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 664
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 568694034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)