Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20201
(306 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88169-11|AAB42238.2| 308|Caenorhabditis elegans C-type lectin ... 29 0.64
U58752-6|AAB00668.1| 308|Caenorhabditis elegans C-type lectin p... 28 1.1
AF067942-13|AAG45577.2| 386|Caenorhabditis elegans Hypothetical... 28 1.1
AF067942-12|AAT68887.1| 385|Caenorhabditis elegans Hypothetical... 28 1.1
U58752-8|AAB00670.1| 308|Caenorhabditis elegans C-type lectin p... 27 2.6
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z78012-5|CAB01415.1| 590|Caenorhabditis elegans Hypothetical pr... 27 3.4
AL021567-3|CAA16509.2| 650|Caenorhabditis elegans Hypothetical ... 26 4.5
AL110484-27|CAI46626.1| 397|Caenorhabditis elegans Hypothetical... 26 6.0
X03044-1|CAA26849.1| 1603|Caenorhabditis elegans put. vitellogen... 25 7.9
U64842-8|AAB37085.1| 173|Caenorhabditis elegans Hypothetical pr... 25 7.9
U42835-3|AAA83587.1| 1603|Caenorhabditis elegans Vitellogenin st... 25 7.9
U23449-4|AAC24299.2| 534|Caenorhabditis elegans Hypothetical pr... 25 7.9
AF106590-3|AAC78235.1| 148|Caenorhabditis elegans Hypothetical ... 25 7.9
AF077539-2|AAK84579.2| 427|Caenorhabditis elegans Hypothetical ... 25 7.9
>U88169-11|AAB42238.2| 308|Caenorhabditis elegans C-type lectin
protein 53 protein.
Length = 308
Score = 29.1 bits (62), Expect = 0.64
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +1
Query: 22 KSAFICFCFLAIA-SAPPPSVSKQYRSDYVYNKDTNAFYKLHTDSAKIWDAKSSCTTEGA 198
K FIC + + P ++ S Y + + T+ YK DA+S+C +G
Sbjct: 142 KLPFICSAAATVVPTCPTITIPSHCPSGYTWFETTDFCYKTTVQFTNFNDARSACQADGG 201
Query: 199 QL 204
L
Sbjct: 202 DL 203
>U58752-6|AAB00668.1| 308|Caenorhabditis elegans C-type lectin
protein 51 protein.
Length = 308
Score = 28.3 bits (60), Expect = 1.1
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +1
Query: 31 FICFCFLAIA-SAPPPSVSKQYRSDYVYNKDTNAFYKLHTDSAKIWDAKSSCTTEGAQL 204
FIC ++ + P ++ S Y + +T+ YK DA+SSC +G L
Sbjct: 145 FICSYSSSVTPTCPSVTIPSHCPSGYTWYDETDFCYKNTVRFTSFNDARSSCQADGGDL 203
>AF067942-13|AAG45577.2| 386|Caenorhabditis elegans Hypothetical
protein ZK6.11a protein.
Length = 386
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = -3
Query: 292 SSTQT*FPRSXNL*TSNEAELYPVLKPA 209
S T+T F NL S E YPVLKPA
Sbjct: 69 SGTKTLFELKQNLQASGEITGYPVLKPA 96
>AF067942-12|AAT68887.1| 385|Caenorhabditis elegans Hypothetical
protein ZK6.11b protein.
Length = 385
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = -3
Query: 292 SSTQT*FPRSXNL*TSNEAELYPVLKPA 209
S T+T F NL S E YPVLKPA
Sbjct: 69 SGTKTLFELKQNLQASGEITGYPVLKPA 96
>U58752-8|AAB00670.1| 308|Caenorhabditis elegans C-type lectin
protein 52 protein.
Length = 308
Score = 27.1 bits (57), Expect = 2.6
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +1
Query: 22 KSAFICFCFL-AIASAPPPSVSKQYRSDYVYNKDTNAFYKLHTDSAKIWDAKSSCTTEGA 198
K FIC A+ + P ++ S Y + + T+ YK DA+S+C +G
Sbjct: 142 KLPFICSASASAMPTFPAVTIPSHCPSGYTWFELTDFCYKNTVQYTNFNDARSACQADGG 201
Query: 199 QL 204
L
Sbjct: 202 DL 203
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 52 AIASAPPPSVSKQYRSDYVYNKDTNAFYKLHTDSAKIWDAKSS 180
A++S P PS + ++ NKD N+ + H D + D S
Sbjct: 456 AVSSVPRPSAISDEWNAFLQNKDRNSSRRDHKDRTRRKDRHDS 498
>Z78012-5|CAB01415.1| 590|Caenorhabditis elegans Hypothetical
protein C52E4.5 protein.
Length = 590
Score = 26.6 bits (56), Expect = 3.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 118 LYYIRSRXGIASKHSEGGHWQSPK 47
++Y R SKHSE G+ Q P+
Sbjct: 471 MFYFNERDEATSKHSENGYIQRPE 494
>AL021567-3|CAA16509.2| 650|Caenorhabditis elegans Hypothetical
protein F21A10.4 protein.
Length = 650
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 142 HTDSAKIWDAKSSCTTEGAQLXVPASEQDIIQLHSMFKD 258
H S IW CT + L VPA ++++I HS+ D
Sbjct: 582 HNHSIPIW---IGCTEDN--LSVPAQQEEVIPKHSLIVD 615
>AL110484-27|CAI46626.1| 397|Caenorhabditis elegans Hypothetical
protein Y38E10A.28 protein.
Length = 397
Score = 25.8 bits (54), Expect = 6.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 103 YVYNKDTNAFYKLHTDSAKIW 165
YVYN DT F ++H ++ W
Sbjct: 205 YVYNSDTILFSRVHPETGLKW 225
>X03044-1|CAA26849.1| 1603|Caenorhabditis elegans put. vitellogenin
protein.
Length = 1603
Score = 25.4 bits (53), Expect = 7.9
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +1
Query: 19 MKSAFICFCFLAIASAPPPSVSKQY--RSDYVYNKDTNAFYKLHTDSAKIWDAKSSCTT 189
MKS I +A+A A P++ + + +S+YVY D L T S+ SC T
Sbjct: 1 MKSIIIA-SLVALAIAASPALDRTFSPKSEYVYKFDGLLLSGLPTRSSDASQTLISCRT 58
>U64842-8|AAB37085.1| 173|Caenorhabditis elegans Hypothetical
protein F25B4.9 protein.
Length = 173
Score = 25.4 bits (53), Expect = 7.9
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +1
Query: 97 SDYVYNKDTNAFYKLHTDSAKIWDAKSSCTTEGAQLXVPASEQDIIQLHSMFKDXQIW 270
S++ Y TN+ YKL ++ A+ C +GA S ++ +H + + +IW
Sbjct: 26 SNWRYFPQTNSCYKLIDENLPWTIAEFKCLFQGAHHVSIDSPEENQFVHELSRWSEIW 83
>U42835-3|AAA83587.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 5 protein.
Length = 1603
Score = 25.4 bits (53), Expect = 7.9
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +1
Query: 19 MKSAFICFCFLAIASAPPPSVSKQY--RSDYVYNKDTNAFYKLHTDSAKIWDAKSSCTT 189
MKS I +A+A A P++ + + +S+YVY D L T S+ SC T
Sbjct: 1 MKSIIIA-SLVALAIAASPALDRTFSPKSEYVYKFDGLLLSGLPTASSDASQTLISCRT 58
>U23449-4|AAC24299.2| 534|Caenorhabditis elegans Hypothetical
protein K06A1.5 protein.
Length = 534
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +1
Query: 124 NAFYKLHTDS-AKIWDAKSSCTTEGAQLXVPASEQDI 231
++F H D + WDA+SS T +L S DI
Sbjct: 387 SSFISSHFDKKVRFWDARSSDATYSVELGQKVSSLDI 423
>AF106590-3|AAC78235.1| 148|Caenorhabditis elegans Hypothetical
protein F08B6.1 protein.
Length = 148
Score = 25.4 bits (53), Expect = 7.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 97 SDYVYNKDTNAFYKLHTDSAKIWDAKSSCTTEG 195
S+ + N+D N + T+SA IW +S + G
Sbjct: 48 SEKICNRDLNGYVLYSTESAWIWVGESKIDSIG 80
>AF077539-2|AAK84579.2| 427|Caenorhabditis elegans Hypothetical
protein T25D3.3 protein.
Length = 427
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -3
Query: 148 QCVVCKTRWCLYYIRSRXGIASKHSEGGHWQSP 50
+ V+ T++ +YY G SK++ HW +P
Sbjct: 254 EIVLADTQYSIYYDYVLNGTFSKNTGAHHWVAP 286
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,761,355
Number of Sequences: 27780
Number of extensions: 118134
Number of successful extensions: 296
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 296
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 323034540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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