Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20200
         (379 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052119-1|AAK93543.1|  392|Drosophila melanogaster SD07085p pro...    28   3.5  
AF220040-1|AAF23824.1|  392|Drosophila melanogaster cathepsin D ...    28   3.5  
AE013599-512|AAF59186.1|  392|Drosophila melanogaster CG1548-PA ...    28   3.5  

>AY052119-1|AAK93543.1|  392|Drosophila melanogaster SD07085p
           protein.
          Length = 392

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -1

Query: 229 YLIVEAAGSTFLFIRDQYFGEAVIEPGIV 143
           YL  +      L I+DQ F EA+ EPG+V
Sbjct: 144 YLSTDTVSIAGLDIKDQTFAEALSEPGLV 172


>AF220040-1|AAF23824.1|  392|Drosophila melanogaster cathepsin D
           precursor protein.
          Length = 392

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -1

Query: 229 YLIVEAAGSTFLFIRDQYFGEAVIEPGIV 143
           YL  +      L I+DQ F EA+ EPG+V
Sbjct: 144 YLSTDTVSIAGLDIKDQTFAEALSEPGLV 172


>AE013599-512|AAF59186.1|  392|Drosophila melanogaster CG1548-PA
           protein.
          Length = 392

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -1

Query: 229 YLIVEAAGSTFLFIRDQYFGEAVIEPGIV 143
           YL  +      L I+DQ F EA+ EPG+V
Sbjct: 144 YLSTDTVSIAGLDIKDQTFAEALSEPGLV 172


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,810,904
Number of Sequences: 53049
Number of extensions: 243504
Number of successful extensions: 451
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 451
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1003372560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)