Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20197
(471 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 101 1e-20
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 99 6e-20
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 95 5e-19
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 92 6e-18
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 91 9e-18
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 86 4e-16
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 81 9e-15
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 74 1e-12
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 70 2e-11
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 69 7e-11
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 68 9e-11
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 66 3e-10
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 64 1e-09
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 54 2e-06
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 54 2e-06
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 53 4e-06
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 53 4e-06
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 53 4e-06
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 52 5e-06
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 51 1e-05
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 50 3e-05
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 49 5e-05
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 49 5e-05
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 49 5e-05
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 49 6e-05
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 49 6e-05
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 48 1e-04
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 47 2e-04
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 46 4e-04
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 45 0.001
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 44 0.002
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 44 0.002
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 42 0.005
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 42 0.009
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 42 0.009
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 41 0.012
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 40 0.028
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 39 0.048
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 39 0.048
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 39 0.064
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 38 0.084
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 38 0.15
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 37 0.19
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 36 0.34
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 36 0.34
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 36 0.45
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 36 0.45
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 36 0.45
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 36 0.45
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 35 0.78
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 35 1.0
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 34 1.4
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 34 1.4
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 34 1.4
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 34 1.4
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 33 2.4
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 33 2.4
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 33 3.2
UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila pseudoobscu... 33 4.2
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 33 4.2
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 33 4.2
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 33 4.2
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 32 5.5
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 32 7.3
UniRef50_A6DJU6 Cluster: Hypothetical methyltransferase; n=1; Le... 32 7.3
UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1... 31 9.7
UniRef50_Q53I53 Cluster: Legumin-like; n=1; Lupinus albus|Rep: L... 31 9.7
UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2; Ostreoco... 31 9.7
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 101 bits (241), Expect = 1e-20
Identities = 50/67 (74%), Positives = 52/67 (77%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 393
K + E L IKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 394 NGHIGFG 414
NGH+G G
Sbjct: 134 NGHVGLG 140
Score = 67.3 bits (157), Expect = 2e-10
Identities = 43/108 (39%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSKNSRSL---ISSSARP*MMRF*RSC 325
K + KEW+PVTKLGRLV++ KI LE IYLFSL K S + + +S + +++
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKI--MP 111
Query: 326 LYRNKHVPDSAHVSRHLLPLATTTXILVLGVKCSKESXPAIRGAIILA 469
+ + + + + + LGVKCSKE AIRGAIILA
Sbjct: 112 VQKQTRAGQRTRF-KAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILA 158
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 98.7 bits (235), Expect = 6e-20
Identities = 49/65 (75%), Positives = 51/65 (78%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 393
K + E L IKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 49 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 108
Query: 394 NGHIG 408
NGH+G
Sbjct: 109 NGHVG 113
Score = 55.2 bits (127), Expect = 7e-07
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSKNS 268
K + KEW+PVTKLGRLV++ KI LE IYLFSL K S
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 66
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 95.5 bits (227), Expect = 5e-19
Identities = 52/84 (61%), Positives = 58/84 (69%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 393
K + E L IKE EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 394 NGHIGFGCEVQQGKXPCHSRRYYP 465
NG+ G EV QG H R ++P
Sbjct: 62 NGYAG-RVEVLQGGGRRHPRGHHP 84
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 91.9 bits (218), Expect = 6e-18
Identities = 42/67 (62%), Positives = 53/67 (79%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 393
K + E L IKE++I+D+FL P LNDEV+K++PVQKQTRAGQRTRFKAFV IGD+
Sbjct: 48 KIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDS 106
Query: 394 NGHIGFG 414
+GH+G G
Sbjct: 107 DGHVGLG 113
Score = 62.5 bits (145), Expect = 5e-09
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSKNSRSLISSSARP*MMRF*RSCLYR 334
++++KEWVPVTKLGRLV+ GKI +E IYL+SL K + I P + +
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKEYQ--IVDYFLPRLNDEVMKVVPV 85
Query: 335 NKHVPDSAHVS-RHLLPLATTTXILVLGVKCSKESXPAIRGAIIL 466
K + + + + + LG+KC+KE AIRGAII+
Sbjct: 86 QKQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKEVATAIRGAIIM 130
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 91.5 bits (217), Expect = 9e-18
Identities = 46/65 (70%), Positives = 48/65 (73%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 393
K + E L IKE EIIDFFLG SL DEVLKIMPVQKQT AGQ TRFKAFV IGD
Sbjct: 14 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDY 73
Query: 394 NGHIG 408
NGH+G
Sbjct: 74 NGHVG 78
Score = 56.0 bits (129), Expect = 4e-07
Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Frame = +2
Query: 176 VPVTKLGRLVREGKIDKLESIYLFSLQSKNSRSL---ISSSARP*MMRF*RSCLYRNKHV 346
+PVTKLG L+ + KI LE IYLFSL K S + + +S + +++ + K
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKI----MPVQKQT 56
Query: 347 PDSAHVS-RHLLPLATTTXILVLGVKCSKESXPAIRGAIILA 469
H + +P+ + L VKCSKE AIRGAIILA
Sbjct: 57 CAGQHTRFKAFVPIGDYNGHVGLSVKCSKEVATAIRGAIILA 98
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 85.8 bits (203), Expect = 4e-16
Identities = 43/74 (58%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Frame = +1
Query: 232 EHLLVF-FTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 408
EH+ +F IKE +I++ F+G L DEV+KI PVQKQT AGQR RFKAFV +GD NGHIG
Sbjct: 69 EHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGHIG 128
Query: 409 FGCEVQQGKXPCHS 450
G V+ K HS
Sbjct: 129 LG--VKACKEVAHS 140
Score = 54.8 bits (126), Expect = 9e-07
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Frame = +2
Query: 158 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSKNSR---SLISSSARP*MMRF*RSCL 328
+D+ WVP TKLGRLV++GKI LE I+LFSL K + I + +M+ C
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIKEHQIVEHFIGGELKDEVMKI---CP 101
Query: 329 YRNKHVPDSAHVSRHLLPLATTTXILVLGVKCSKESXPAIRGAIILA 469
+ + + + + + LGVK KE +I+G++ILA
Sbjct: 102 VQKQTTAGQRMRFKAFVVVGDCNGHIGLGVKACKEVAHSIQGSMILA 148
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 81.4 bits (192), Expect = 9e-15
Identities = 37/53 (69%), Positives = 43/53 (81%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFG 414
+KEF+IID L P L DEV+ I PVQKQTRAGQRTRFKA V +GD+NGH+G G
Sbjct: 63 VKEFQIIDTLL-PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLG 114
Score = 49.6 bits (113), Expect = 3e-05
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Frame = +2
Query: 161 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSKNSRSLISSSARP*MMRF*RSCLYRNK 340
++K WVPVTKLGRLV+ GKI +E I+L SL K + I + P + + K
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQ--IIDTLLPGLQDEVMNIKPVQK 88
Query: 341 HVPDSAHVS-RHLLPLATTTXILVLGVKCSKESXPAIRGAIILA 469
+ ++ + + + LG+K +KE AIR II+A
Sbjct: 89 QTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIIIA 132
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 74.1 bits (174), Expect = 1e-12
Identities = 38/52 (73%), Positives = 39/52 (75%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 369
K + E L IKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFK
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
Score = 55.2 bits (127), Expect = 7e-07
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSKNS 268
K + KEW+PVTKLGRLV++ KI LE IYLFSL K S
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 70.1 bits (164), Expect = 2e-11
Identities = 31/58 (53%), Positives = 40/58 (68%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFGCEVQQ 429
I+E EI+D G S+ +EVL I VQKQTRAGQ+TR KA V +GD GH+G G + +
Sbjct: 49 IREPEIVDLLCGNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASK 106
Score = 39.9 bits (89), Expect = 0.028
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSKNSR---SLISSSARP*MMRF*RSC 325
++++ EW+P T +GRLV+ KI LE I+ FS + L +S + ++
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIREPEIVDLLCGNSIKEEVLSI--KS 72
Query: 326 LYRNKHVPDSAHVSRHLLPLATTTXILVLGVKCSKESXPAIRGAIILA 469
+ + + + ++ + + +G K SKE+ AIRGAI A
Sbjct: 73 VQKQTRAGQKTRI-KAVVVVGDRKGHVGIGTKASKEAASAIRGAIARA 119
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 68.5 bits (160), Expect = 7e-11
Identities = 32/37 (86%), Positives = 32/37 (86%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFG 414
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH G G
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLG 84
Score = 31.9 bits (69), Expect = 7.3
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +2
Query: 410 LGVKCSKESXPAIRGAIILA 469
LGVKCSKE AIR AIILA
Sbjct: 83 LGVKCSKEVATAIREAIILA 102
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 68.1 bits (159), Expect = 9e-11
Identities = 32/53 (60%), Positives = 42/53 (79%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFG 414
IKE++I+D FL +L +E L I PVQKQT AGQ+TRFKA+V +GD++ HIG G
Sbjct: 92 IKEYQIVDHFL-KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLG 143
Score = 47.2 bits (107), Expect = 2e-04
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = +2
Query: 164 QKEWVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
++EWVP+TKLGRLV+ GKI LE+I+ FS+ K
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIK 93
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 66.5 bits (155), Expect = 3e-10
Identities = 36/89 (40%), Positives = 47/89 (52%)
Frame = +1
Query: 154 QGRPERVGSCHQTRPSCSRRKNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQ 333
QG + P K + + +L IKEFE+ DF LG L D+VLK+M VQ
Sbjct: 116 QGLAPELSKAASESPQVKDMKMKSLKVYLFSL-PIKEFEVTDFLLGVPLKDKVLKLMFVQ 174
Query: 334 KQTRAGQRTRFKAFVAIGDNNGHIGFGCE 420
KQ +AG+R RFK V I D N ++ G E
Sbjct: 175 KQPKAGRRIRFKVIVTIRDCNDNVSLGVE 203
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 64.1 bits (149), Expect = 1e-09
Identities = 34/52 (65%), Positives = 36/52 (69%)
Frame = +1
Query: 214 KNRQTREHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 369
K + E L IK EIIDFFLG SL +EVLK MPVQKQTRAGQ TRFK
Sbjct: 74 KIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
Score = 51.2 bits (117), Expect = 1e-05
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSKNS 268
K + KEW+P TKLG LV++ KI LE IYLFSL K S
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGS 91
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 54.0 bits (124), Expect = 2e-06
Identities = 33/63 (52%), Positives = 38/63 (60%)
Frame = +1
Query: 232 EHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGF 411
E L IKE EIID FLG +L DEVLK +P QK TR GQ +KA GD NGH+
Sbjct: 68 EIYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ--YYKA----GDYNGHVIT 121
Query: 412 GCE 420
G +
Sbjct: 122 GLD 124
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 54.0 bits (124), Expect = 2e-06
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGH 402
IKE++I+D L L +EV+ I VQKQT G+ R KA VAIGD+NGH
Sbjct: 62 IKEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGH 109
Score = 36.7 bits (81), Expect = 0.26
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +2
Query: 179 PVTKLGRLVREGKIDKLESIYLFSLQSK 262
PVTKLGRLV++GK+ ++ I+ F ++ K
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIK 63
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 52.8 bits (121), Expect = 4e-06
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +2
Query: 155 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
K + KEW+PVTKLGRLV++ KI LE IYLFSL K
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 52.8 bits (121), Expect = 4e-06
Identities = 27/55 (49%), Positives = 34/55 (61%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFGCE 420
IKEFE+ DF L L D+VLK+M V+KQ AG+ RFK V I N ++ G E
Sbjct: 15 IKEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGVE 69
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 52.8 bits (121), Expect = 4e-06
Identities = 24/52 (46%), Positives = 37/52 (71%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGF 411
+KE EI+D L P L DEVL I VQ+ T +G+R +F+ VA+G+ +G++G+
Sbjct: 86 LKEAEIVDQLL-PGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLGY 136
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 52.4 bits (120), Expect = 5e-06
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = +2
Query: 164 QKEWVPVTKLGRLVREGKIDKLESIYLFSLQSKNSRSLISSSARP 298
+ +W+P+TKLG LV+E KI LE IY FSL S+N RSL S P
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEHP 95
Score = 33.5 bits (73), Expect = 2.4
Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIM---PVQKQTRAGQRTRFKAFVAIGDNNGHIGFG 414
IK E I FF S N L P+ KQT Q+TRFKA V +G + GH+ G
Sbjct: 69 IKSLEEIYFFSLLSRNLRSLTFSWEHPLIKQTCTDQQTRFKASVTVG-SYGHVSLG 123
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 51.2 bits (117), Expect = 1e-05
Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Frame = +1
Query: 247 FFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAI--GDNNGHIGFGCE 420
+ +KEFEI DFFL SL D+VLKI+P+ + R Q TRF +F I G +NG IG C
Sbjct: 17 YLPVKEFEINDFFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTINYGGHNG-IGVKCS 74
Query: 421 VQQG 432
+ G
Sbjct: 75 KKVG 78
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 50.0 bits (114), Expect = 3e-05
Identities = 23/52 (44%), Positives = 36/52 (69%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGF 411
+KE E++D + P L DEVL I VQ+ T +G+R +F+ VA+G+ +G IG+
Sbjct: 35 LKESEVVDQLV-PDLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGY 85
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 49.2 bits (112), Expect = 5e-05
Identities = 22/59 (37%), Positives = 37/59 (62%)
Frame = +1
Query: 232 EHLLVFFTIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 408
E L I+E EI+D L P L+D+VL + +Q+ T +G+R RF +G+++G++G
Sbjct: 12 EALATGLPIREVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVG 69
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 49.2 bits (112), Expect = 5e-05
Identities = 26/53 (49%), Positives = 33/53 (62%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFG 414
I+E II L P L EV+ + +QK T GQ TRFKA VA G+ NG++G G
Sbjct: 74 IQEAGIIKKLL-PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIG 125
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 49.2 bits (112), Expect = 5e-05
Identities = 19/53 (35%), Positives = 34/53 (64%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFG 414
+KE++I+D+ + P L DEV+ I Q+ T +G+R + +G+ NG++G G
Sbjct: 33 LKEYQIVDYLI-PDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVG 84
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 48.8 bits (111), Expect = 6e-05
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = -1
Query: 456 APRMAGXLSLLHFTPKTNMXVVVANGNKCLETCALSGTCLFLYRHDL*NLIIQGRAEEEI 277
+P G L +T++ V V +G++ LE L+GT L L HDL + ++Q A+EEI
Sbjct: 48 SPTDGGGHFLAALDAQTDVAVAVTDGDEGLEARTLTGTGLLLDGHDLQHFVLQRAAQEEI 107
Query: 276 NDLEFFD 256
+DLE F+
Sbjct: 108 DDLELFN 114
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 48.8 bits (111), Expect = 6e-05
Identities = 26/53 (49%), Positives = 33/53 (62%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFG 414
I+E II L P L EV+ + +QK T GQ TRFKA VA G+ NG++G G
Sbjct: 55 IQESGIIKKLL-PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIG 106
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 48.0 bits (109), Expect = 1e-04
Identities = 21/51 (41%), Positives = 35/51 (68%)
Frame = +1
Query: 262 EFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFG 414
E EI+D L P L ++VL + VQ+ ++G+R R++A V +G+ NG++G G
Sbjct: 46 EPEIVDALL-PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVG 95
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 46.8 bits (106), Expect = 2e-04
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +1
Query: 289 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFGC 417
GP ++VL++ + K + G+ F+A VA+GD NG IG GC
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGC 110
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 46.0 bits (104), Expect = 4e-04
Identities = 24/53 (45%), Positives = 34/53 (64%)
Frame = +1
Query: 256 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFG 414
I E EI+D L P L EV+ I VQKQT AG+ +R+K V +G+ +G++ G
Sbjct: 41 ITEPEIVDVLL-PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIG 92
Score = 31.9 bits (69), Expect = 7.3
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 167 KEWVPVTKLGRLVREGKIDKLESIY 241
+EW P T +G LV+EGKI ++ ++
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELF 35
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 44.8 bits (101), Expect = 0.001
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +1
Query: 298 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFG 414
L + V+ + V K + G+R RF A V +GD NGH+GFG
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFG 50
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 44.0 bits (99), Expect = 0.002
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +1
Query: 295 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFG 414
+ + V+KI + K T+ G+ RF A V IGD NG +GFG
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFG 87
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 44.0 bits (99), Expect = 0.002
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Frame = +1
Query: 250 FTIKEFEIIDFFLGPSLN----DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFG 414
+ IKE EIID L P +N EVL I + T +G+R RF+ A+G+ +G++G G
Sbjct: 42 YQIKEPEIIDVLL-PEVNARENQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLG 99
Score = 32.7 bits (71), Expect = 4.2
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 170 EWVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
EW P TKLG +V+EG+I + I+ Q K
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIK 45
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 42.3 bits (95), Expect = 0.005
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +1
Query: 277 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHI 405
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHV 43
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 41.5 bits (93), Expect = 0.009
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +1
Query: 331 QKQTRAGQRTRFKAFVAIGDNNGHIGFG 414
QKQT+ GQ+ R K F GD NGH+G G
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLG 28
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 41.5 bits (93), Expect = 0.009
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +1
Query: 292 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGF 411
P L ++V+KI + K + G R RF A V +GD G IGF
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGF 52
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 41.1 bits (92), Expect = 0.012
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = +2
Query: 173 WVPVTKLGRLVREGKIDKLESIYLFSLQSK 262
W PVTKLGRLV++GK+ ++ I+ F ++ K
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIK 64
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 39.9 bits (89), Expect = 0.028
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +1
Query: 298 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFG 414
L ++++ + + K T+ G+ RF A IGD G++GFG
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFG 116
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 39.1 bits (87), Expect = 0.048
Identities = 15/49 (30%), Positives = 32/49 (65%)
Frame = +1
Query: 268 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFG 414
++++ G SL +V++ + V + T++G++ + K V +GD +GH+G G
Sbjct: 98 KLVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLG 146
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 39.1 bits (87), Expect = 0.048
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFG 414
+ ++KI V K T+ G++ F+A V IGD NG +G G
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVG 64
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 38.7 bits (86), Expect = 0.064
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFGC 417
+ V+++ V K + G++ +F+A V +GD G++G GC
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGC 186
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 38.3 bits (85), Expect = 0.084
Identities = 25/49 (51%), Positives = 29/49 (59%)
Frame = +1
Query: 259 KEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHI 405
K+ II FFL SL DE IMPVQ QT R FK FV+I D + H+
Sbjct: 88 KKSMIIGFFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHV 132
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 37.5 bits (83), Expect = 0.15
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 289 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFG 414
G L ++++ I V K + G+R F A V +GD G +GFG
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFG 97
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 37.1 bits (82), Expect = 0.19
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2
Query: 167 KEWVPVTKLGRLVREGKIDKLESI 238
+EW P TKLGRLV+EGKI ++ I
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEI 28
Score = 36.3 bits (80), Expect = 0.34
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 13/68 (19%)
Frame = +1
Query: 250 FTIKEFEIIDFFLGPSLNDEVLKIMPV-------------QKQTRAGQRTRFKAFVAIGD 390
+ I+E EI+D L P+L E +K + QK+T G +TR++ +GD
Sbjct: 33 YVIREPEIVDVLL-PNLEVEFMKWRIIRGKFRSKKPYRMAQKKTAEGNKTRYEVIAIVGD 91
Query: 391 NNGHIGFG 414
+GH+G G
Sbjct: 92 KDGHVGVG 99
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 36.3 bits (80), Expect = 0.34
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +1
Query: 283 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFG 414
F ++V+ I V K T+ G+ RF A V +GD G +G G
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLG 81
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 36.3 bits (80), Expect = 0.34
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +1
Query: 298 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFG 414
L ++++ I V K + G+R F A V +GD NG +G+G
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYG 54
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 35.9 bits (79), Expect = 0.45
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFG 414
D+++ I V K + G+R F A V +GD G +GFG
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFG 60
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 35.9 bits (79), Expect = 0.45
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFG 414
+ V++I V K + G++ F+A + +GD NG +G G
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVG 104
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 35.9 bits (79), Expect = 0.45
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFG 414
+++LKI V K T+ G+ F A+GD G IG G
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLG 47
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 35.9 bits (79), Expect = 0.45
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +1
Query: 289 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFG 414
G L D V+ I V K + G+ F A V +GD NG +G G
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVG 83
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 35.1 bits (77), Expect = 0.78
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 298 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFG 414
L + ++ + T+ G+R F V +GD GH+GFG
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFG 66
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 34.7 bits (76), Expect = 1.0
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 277 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFGCE 420
DF G + + ++++ V K + G+ F+ IG+ NG +G GC+
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQ 553
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 34.3 bits (75), Expect = 1.4
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +1
Query: 355 RTRFKAFVAIGDNNGHIGFG 414
+ RFKAFVAIGD+NG +G G
Sbjct: 61 KIRFKAFVAIGDDNGQVGPG 80
Score = 34.3 bits (75), Expect = 1.4
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 413 GVKCSKESXPAIRGAIILA 469
GVKCSKE+ AIRGA+ILA
Sbjct: 80 GVKCSKEAATAIRGAVILA 98
Score = 33.5 bits (73), Expect = 2.4
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 161 DQKEWVPVTKLGRLVREGKI 220
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 34.3 bits (75), Expect = 1.4
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = +1
Query: 268 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAF 375
+II+FFLG L DEVL+ M Q QRTR K F
Sbjct: 51 DIIEFFLGEHLKDEVLRTMLAQ-----NQRTRIKVF 81
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 34.3 bits (75), Expect = 1.4
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFG 414
+ V+ I V K + G+R F A V +GD NG +G G
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVG 80
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 34.3 bits (75), Expect = 1.4
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFG 414
+++L + K + G+R RF A V +GD NG +G G
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMG 55
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 33.5 bits (73), Expect = 2.4
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFG 414
+ V+++ V K + G++ F+A V +GD G +G G
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVG 222
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 33.5 bits (73), Expect = 2.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 301 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFG 414
+++V+KI V K + G+R F A +GD G +G G
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIG 68
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 33.1 bits (72), Expect = 3.2
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 298 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFG 414
L ++VL + K + G++ F A + +GD G +G+G
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYG 51
>UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila
pseudoobscura|Rep: GA16916-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 391
Score = 32.7 bits (71), Expect = 4.2
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Frame = -2
Query: 182 QEPTLSGLPCRAHDHGRDHDRVHE-DRRGLYLHRV-----IRIRRENRHVHRLEQRPPL 24
+EPT S CR+ GR H R G HR+ IR R HRL + PP+
Sbjct: 146 REPTRSPSRCRSRQSGRSHQHPQRRSRSGTRQHRLSREPPIRHSRSISRQHRLSREPPV 204
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 32.7 bits (71), Expect = 4.2
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = -1
Query: 252 KENK*MLSSLSIFPSRTRRPSLVTGTHSFWS 160
KE K + S + I P+ T PSLVTGTH F S
Sbjct: 23 KECKKISSMVVILPALTNLPSLVTGTHPFSS 53
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 32.7 bits (71), Expect = 4.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 286 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFG 414
L L D V+KI + G+R F A V +G+ +G +G+G
Sbjct: 17 LEAGLLDRVVKIKRCAAVVKGGRRFSFAAMVVVGNGSGQVGWG 59
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 32.7 bits (71), Expect = 4.2
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 304 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFG 414
++++ I V + G+R F A V +GD G +G+G
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYG 127
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 32.3 bits (70), Expect = 5.5
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 310 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFGCEVQQGKXPCHSRR 456
V+++ V T G++ +A V +G+ NG GFG V +G+ P + R
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFG--VGKGRTPISAIR 202
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 31.9 bits (69), Expect = 7.3
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 298 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGFG 414
L ++V+ I K + G+R F A +GD NG +G G
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIG 109
>UniRef50_A6DJU6 Cluster: Hypothetical methyltransferase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Hypothetical
methyltransferase - Lentisphaera araneosa HTCC2155
Length = 437
Score = 31.9 bits (69), Expect = 7.3
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = -2
Query: 428 CCTSHPKPIXPLLSPMATNAL--KRVR-CPARVCFCTGMIFRTSSFRDGPRKK 279
C + P P LL P N L + R CP FC G I TS ++ P +K
Sbjct: 157 CLQNSPMPAYELLDPSFYNRLTIQTSRGCPHSCEFCAGSILLTSKYKQKPAEK 209
>UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1;
Acidobacteria bacterium Ellin345|Rep: Molybdenum
cofactor synthesis-like - Acidobacteria bacterium
(strain Ellin345)
Length = 338
Score = 31.5 bits (68), Expect = 9.7
Identities = 15/26 (57%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Frame = -1
Query: 345 TCLFLYR-HDL*NLIIQGRAEEEIND 271
TCLF R HDL +LI++G ++EEI D
Sbjct: 281 TCLFSVREHDLASLILEGASDEEIAD 306
>UniRef50_Q53I53 Cluster: Legumin-like; n=1; Lupinus albus|Rep:
Legumin-like - Lupinus albus (White lupin)
Length = 265
Score = 31.5 bits (68), Expect = 9.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -2
Query: 152 RAHDHGRDHDRVHEDRRGLYLHRVIRIRRENRHVHRLEQR 33
R H H H+ E+ + H+V R+RR +RH H + R
Sbjct: 113 RRHPHHHHHEEEEEEEEE-WSHQVRRVRRPHRHHHHRKDR 151
>UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2;
Ostreococcus|Rep: COG0457: FOG: TPR repeat - Ostreococcus
tauri
Length = 1474
Score = 31.5 bits (68), Expect = 9.7
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 4/37 (10%)
Frame = -1
Query: 369 LETCALSGTCLFLYRHDL*NLI----IQGRAEEEIND 271
LE+CAL TC+ +Y HD+ ++ + +A+E+++D
Sbjct: 965 LESCALDDTCVIVYEHDMNRVMLCRTLVSKAKEKLSD 1001
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 424,026,425
Number of Sequences: 1657284
Number of extensions: 7473480
Number of successful extensions: 22470
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 21192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22326
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26030843530
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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