Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20195
         (508 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21943-1|AAA87732.1|  670|Homo sapiens organic anion transportin...    29   7.1  
BC042452-1|AAH42452.2|  408|Homo sapiens SLCO1A2 protein protein.      29   7.1  
AJ400735-1|CAB97006.1|  670|Homo sapiens organic anion transport...    29   7.1  
AF279784-1|AAG30037.1|  670|Homo sapiens organic anion transport...    29   7.1  
AF085224-1|AAD52694.1|  579|Homo sapiens brain organic anion tra...    29   7.1  

>U21943-1|AAA87732.1|  670|Homo sapiens organic anion transporting
           polypeptide protein.
          Length = 670

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 16/40 (40%), Positives = 26/40 (65%)
 Frame = +3

Query: 117 LLFIVIIIREFNTHINISLFIKYIYFLRGYGVSS*SDAWF 236
           +LFI++ + +FN  +N+  F+   Y  + YG+SS SDA F
Sbjct: 319 MLFILVSVIQFNAFVNMISFMPK-YLEQQYGISS-SDAIF 356


>BC042452-1|AAH42452.2|  408|Homo sapiens SLCO1A2 protein protein.
          Length = 408

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 16/40 (40%), Positives = 26/40 (65%)
 Frame = +3

Query: 117 LLFIVIIIREFNTHINISLFIKYIYFLRGYGVSS*SDAWF 236
           +LFI++ + +FN  +N+  F+   Y  + YG+SS SDA F
Sbjct: 299 MLFILVSVIQFNAFVNMISFMPK-YLEQQYGISS-SDAIF 336


>AJ400735-1|CAB97006.1|  670|Homo sapiens organic anion transporting
           polypeptide 1 (OATP1) protein.
          Length = 670

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 16/40 (40%), Positives = 26/40 (65%)
 Frame = +3

Query: 117 LLFIVIIIREFNTHINISLFIKYIYFLRGYGVSS*SDAWF 236
           +LFI++ + +FN  +N+  F+   Y  + YG+SS SDA F
Sbjct: 319 MLFILVSVIQFNAFVNMISFMPK-YLEQQYGISS-SDAIF 356


>AF279784-1|AAG30037.1|  670|Homo sapiens organic anion transporting
           polypeptide protein.
          Length = 670

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 16/40 (40%), Positives = 26/40 (65%)
 Frame = +3

Query: 117 LLFIVIIIREFNTHINISLFIKYIYFLRGYGVSS*SDAWF 236
           +LFI++ + +FN  +N+  F+   Y  + YG+SS SDA F
Sbjct: 319 MLFILVSVIQFNAFVNMISFMPK-YLEQQYGISS-SDAIF 356


>AF085224-1|AAD52694.1|  579|Homo sapiens brain organic anion
           transporter subtype OATP1b protein.
          Length = 579

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 16/40 (40%), Positives = 26/40 (65%)
 Frame = +3

Query: 117 LLFIVIIIREFNTHINISLFIKYIYFLRGYGVSS*SDAWF 236
           +LFI++ + +FN  +N+  F+   Y  + YG+SS SDA F
Sbjct: 317 MLFILVSVIQFNAFVNMISFMPK-YLEQQYGISS-SDAIF 354


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,024,747
Number of Sequences: 237096
Number of extensions: 1365562
Number of successful extensions: 1287
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1286
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)