BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbS20195 (508 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. 23 1.4 AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 7.3 AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 9.7 >L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. Length = 382 Score = 23.4 bits (48), Expect = 1.4 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = +3 Query: 138 IREFNTHINISLFIKYIYFLRGYGVS 215 +REFN + N+ F+ + Y LR VS Sbjct: 40 VREFNVYWNVPTFMCHKYGLRFEEVS 65 >AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate receptor 1 protein. Length = 953 Score = 21.0 bits (42), Expect = 7.3 Identities = 7/12 (58%), Positives = 8/12 (66%) Frame = -1 Query: 58 INPRSAGRMWYG 23 + PRS GR W G Sbjct: 911 VTPRSPGRAWPG 922 >AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein protein. Length = 1124 Score = 20.6 bits (41), Expect = 9.7 Identities = 7/11 (63%), Positives = 9/11 (81%) Frame = +1 Query: 202 DTEFQVNRMHG 234 +T FQVN+ HG Sbjct: 688 NTHFQVNQSHG 698 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 135,141 Number of Sequences: 438 Number of extensions: 2421 Number of successful extensions: 3 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3 length of database: 146,343 effective HSP length: 54 effective length of database: 122,691 effective search space used: 13986774 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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