Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20193
(562 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.59
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.59
EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 prot... 25 0.59
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 24 0.78
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.4
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.4
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.4
DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired pr... 23 1.4
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 22 3.1
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 22 4.1
AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory recept... 21 5.5
AF264721-1|AAF75273.1| 126|Tribolium castaneum putative cytochr... 21 7.2
DQ855493-1|ABH88180.1| 127|Tribolium castaneum chemosensory pro... 21 9.6
AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory recept... 21 9.6
AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory recept... 21 9.6
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.59
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -3
Query: 458 LPADSRACLVLAVAVGRSAIVALNIIAQRQSETVALVHKLNRVF 327
LP DS L L V + S V LN++A++ T V + F
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAEKIPTTSDAVPLIGTYF 278
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 24.6 bits (51), Expect = 0.59
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -3
Query: 458 LPADSRACLVLAVAVGRSAIVALNIIAQRQSETVALVHKLNRVF 327
LP DS L L V + S V LN++A++ T V + F
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAEKIPTTSDAVPLIGTYF 278
>EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4
protein.
Length = 475
Score = 24.6 bits (51), Expect = 0.59
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 269 GLQGHRPGLFPS*VQTYLRRK 331
G+ GH GL+PS V T +K
Sbjct: 215 GVTGHHSGLYPSAVDTTTNQK 235
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 24.2 bits (50), Expect = 0.78
Identities = 15/62 (24%), Positives = 32/62 (51%)
Frame = +3
Query: 195 HKCREQTDTKQQDELHGVRLQLWLQGSKDIVRDCFPVEFRLIFAENAIKLMYKRDGLALT 374
HK E D + D++ LQ+ + + FP+++ L+F+E + L++K + +
Sbjct: 668 HKI-ETNDHEIIDKIEMFSLQILNERAGFSAAGFFPIDYSLVFSETKL-LLFKITSVMIA 725
Query: 375 LS 380
+S
Sbjct: 726 VS 727
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 23.4 bits (48), Expect = 1.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 458 LPADSRACLVLAVAVGRSAIVALNIIAQ 375
LP DS L L V + S V LN++A+
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAE 262
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 23.4 bits (48), Expect = 1.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 458 LPADSRACLVLAVAVGRSAIVALNIIAQ 375
LP DS L L V + S V LN++A+
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAE 262
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 23.4 bits (48), Expect = 1.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 458 LPADSRACLVLAVAVGRSAIVALNIIAQ 375
LP DS L L V + S V LN++A+
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAE 262
>DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired
protein.
Length = 311
Score = 23.4 bits (48), Expect = 1.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 65 MLQIPTSLTTFWRSSFTIASSSPITTVRLKRA 160
+L IPT T +SSF+I+S P T + ++
Sbjct: 8 ILVIPTMARTPLKSSFSISSILPETALEAPKS 39
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 22.2 bits (45), Expect = 3.1
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +3
Query: 336 IKLMYKRDGLALTLSNDVQGDDGRPAYGDGKDKTSPRV 449
IKL+ +++ LS+D ++ + G+ KDK P++
Sbjct: 211 IKLVVEKER-EKELSDDEAEEEKKEEEGEDKDKDKPKI 247
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 21.8 bits (44), Expect = 4.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 360 GLALTLSNDVQGDDGRPAYGDGKDKTSPRVS 452
G TLSN + PA G GK+ T + S
Sbjct: 335 GRTFTLSNTAKFGVHAPASGGGKEGTYTKES 365
>AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory receptor
candidate 53 protein.
Length = 659
Score = 21.4 bits (43), Expect = 5.5
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = +2
Query: 53 WHLCMLQIPTSLTTFWRSS 109
+H+ M +PT L +F++S+
Sbjct: 59 YHIFMHIVPTKLISFYKST 77
>AF264721-1|AAF75273.1| 126|Tribolium castaneum putative cytochrome
P450 monooxigenaseCYP4Q2 protein.
Length = 126
Score = 21.0 bits (42), Expect = 7.2
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -3
Query: 350 VHKLNRVFGEDKSELNWETIPDDVL 276
VH ++R GED IP D +
Sbjct: 62 VHLISRALGEDVRTQKGYLIPKDTI 86
>DQ855493-1|ABH88180.1| 127|Tribolium castaneum chemosensory
protein 7 protein.
Length = 127
Score = 20.6 bits (41), Expect = 9.6
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 34 VILCLFVASLYAADSDVPN 90
VILC F+ ++ AA++ N
Sbjct: 7 VILCAFLVAVSAAENKYTN 25
>AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory receptor
candidate 56 protein.
Length = 358
Score = 20.6 bits (41), Expect = 9.6
Identities = 6/18 (33%), Positives = 13/18 (72%)
Frame = -3
Query: 218 ISLFTTFVMTSLFFSSYK 165
+++ T +T +FF+SY+
Sbjct: 152 VTIVATLTVTIIFFASYQ 169
>AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory receptor
candidate 21 protein.
Length = 386
Score = 20.6 bits (41), Expect = 9.6
Identities = 6/18 (33%), Positives = 13/18 (72%)
Frame = -3
Query: 218 ISLFTTFVMTSLFFSSYK 165
+++ T +T +FF+SY+
Sbjct: 152 VTIVATLTVTIIFFASYQ 169
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,209
Number of Sequences: 336
Number of extensions: 1858
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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