Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20191
(532 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 25 0.64
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 24 0.84
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 24 0.84
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 24 0.84
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 1.9
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 2.6
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 2.6
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 5.9
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.9
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.9
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.9
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.9
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.9
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.9
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 7.9
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 7.9
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 24.6 bits (51), Expect = 0.64
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +3
Query: 267 TKDGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHALKLIDQQNHNKIA 410
T + K+I K P + ++I V ++ DH L+D + IA
Sbjct: 124 TMENKDITKRPLPNESQLIKRHPIVTIMGHVDHGKTTLLDALRNTSIA 171
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 24.2 bits (50), Expect = 0.84
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 148 AIAKCSEYLKEKKGEVIKEAVKRLIEN 228
A+A + +K+ EVIK+ +K L+EN
Sbjct: 71 ALATDCKKCTDKQREVIKKVIKFLVEN 97
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 24.2 bits (50), Expect = 0.84
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 148 AIAKCSEYLKEKKGEVIKEAVKRLIEN 228
A+A + +K+ EVIK+ +K L+EN
Sbjct: 71 ALATDCKKCTDKQREVIKKVIKFLVEN 97
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 24.2 bits (50), Expect = 0.84
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 148 AIAKCSEYLKEKKGEVIKEAVKRLIEN 228
A+A + +K+ EVIK+ +K L+EN
Sbjct: 71 ALATDCKKCTDKQREVIKKVIKFLVEN 97
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 23.0 bits (47), Expect = 1.9
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +3
Query: 366 HALKLIDQQNHNKIAFGDSKDKTSKK--VSWKVYPRVGKQQSLL 491
H + ID H S D + K + WK++P G+++S L
Sbjct: 990 HFISGIDSNLHVYAPLKISLDVNTPKGNMQWKIWPMKGEEKSRL 1033
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 22.6 bits (46), Expect = 2.6
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +2
Query: 230 ARGTPWTSLPVMDKGWKGNRQILLP 304
A PW++LP+ D N I P
Sbjct: 88 ANEKPWSTLPIEDLTKSDNEDITYP 112
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 22.6 bits (46), Expect = 2.6
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +2
Query: 230 ARGTPWTSLPVMDKGWKGNRQILLP 304
A PW++LP+ D N I P
Sbjct: 126 ANEKPWSTLPIEDLTKSDNEDITYP 150
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.4 bits (43), Expect = 5.9
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 341 QAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQE 442
Q H+Q+ V +PQQ + Q+Q QQ+
Sbjct: 422 QQHQQQQQQTQHVINAQQPQQQQQQQQQQQQQQQ 455
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.0 bits (42), Expect = 7.9
Identities = 5/18 (27%), Positives = 12/18 (66%)
Frame = +3
Query: 234 EEHHGLRYQLWTKDGKEI 287
++H +++ WT DG ++
Sbjct: 122 DQHCDMKFGSWTYDGNQV 139
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.0 bits (42), Expect = 7.9
Identities = 5/18 (27%), Positives = 12/18 (66%)
Frame = +3
Query: 234 EEHHGLRYQLWTKDGKEI 287
++H +++ WT DG ++
Sbjct: 122 DQHCDMKFGSWTYDGNQV 139
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.0 bits (42), Expect = 7.9
Identities = 5/18 (27%), Positives = 12/18 (66%)
Frame = +3
Query: 234 EEHHGLRYQLWTKDGKEI 287
++H +++ WT DG ++
Sbjct: 122 DQHCDMKFGSWTYDGNQV 139
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.0 bits (42), Expect = 7.9
Identities = 5/18 (27%), Positives = 12/18 (66%)
Frame = +3
Query: 234 EEHHGLRYQLWTKDGKEI 287
++H +++ WT DG ++
Sbjct: 122 DQHCDMKFGSWTYDGNQV 139
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.0 bits (42), Expect = 7.9
Identities = 5/18 (27%), Positives = 12/18 (66%)
Frame = +3
Query: 234 EEHHGLRYQLWTKDGKEI 287
++H +++ WT DG ++
Sbjct: 122 DQHCDMKFGSWTYDGNQV 139
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.0 bits (42), Expect = 7.9
Identities = 5/18 (27%), Positives = 12/18 (66%)
Frame = +3
Query: 234 EEHHGLRYQLWTKDGKEI 287
++H +++ WT DG ++
Sbjct: 122 DQHCDMKFGSWTYDGNQV 139
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 7.9
Identities = 5/18 (27%), Positives = 12/18 (66%)
Frame = +3
Query: 234 EEHHGLRYQLWTKDGKEI 287
++H +++ WT DG ++
Sbjct: 190 DQHCDMKFGSWTYDGNQV 207
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 7.9
Identities = 5/18 (27%), Positives = 12/18 (66%)
Frame = +3
Query: 234 EEHHGLRYQLWTKDGKEI 287
++H +++ WT DG ++
Sbjct: 190 DQHCDMKFGSWTYDGNQV 207
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,623
Number of Sequences: 438
Number of extensions: 3249
Number of successful extensions: 17
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14968302
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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