Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20191
         (532 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g62250.2 68414.m07023 expressed protein                             31   0.64 
At1g62250.1 68414.m07022 expressed protein                             31   0.64 
At1g53910.1 68414.m06137 AP2 domain-containing protein RAP2.12 (...    30   1.1  
At5g06270.1 68418.m00702 expressed protein                             29   1.5  
At4g13290.1 68417.m02078 cytochrome P450 71A19, putative (CYP71A...    29   2.6  
At1g56660.1 68414.m06516 expressed protein                             28   3.4  
At5g01460.1 68418.m00059 LMBR1 integral membrane family protein ...    28   4.5  
At3g08930.2 68416.m01039 LMBR1 integral membrane family protein ...    27   7.9  
At3g08930.1 68416.m01040 LMBR1 integral membrane family protein ...    27   7.9  

>At1g62250.2 68414.m07023 expressed protein
          Length = 223

 Score = 30.7 bits (66), Expect = 0.64
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +2

Query: 26  LCLPSSSPCVRWLXTPHLHQELMTYWRSSCI*VSSLVNTRPLS 154
           LC P  +  +RW  TP +  E+++ WR  C  +++    R ++
Sbjct: 181 LCTPQPT-VIRWSSTPSVSDEILSKWRGFCAVIANAYYIRGMA 222


>At1g62250.1 68414.m07022 expressed protein
          Length = 267

 Score = 30.7 bits (66), Expect = 0.64
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +2

Query: 26  LCLPSSSPCVRWLXTPHLHQELMTYWRSSCI*VSSLVNTRPLS 154
           LC P  +  +RW  TP +  E+++ WR  C  +++    R ++
Sbjct: 181 LCTPQPT-VIRWSSTPSVSDEILSKWRGFCAVIANAYYIRGMA 222


>At1g53910.1 68414.m06137 AP2 domain-containing protein RAP2.12
           (RAP2.12) identical to AP2 domain containing protein
           GI:2281649 from [Arabidopsis thaliana]
          Length = 358

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +3

Query: 177 GKEGRGYQGSREAS-DRKRQEEHHGLRYQLWTKDGKEI 287
           GK+  G  G  E S +RKR+ ++ G+R + W K   EI
Sbjct: 103 GKKVTGLDGDAEKSANRKRKNQYRGIRQRPWGKWAAEI 140


>At5g06270.1 68418.m00702 expressed protein
          Length = 122

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
 Frame = +2

Query: 341 QAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQE-SLLESLPPCWKTTEFTLRXCHRDKQ 517
           Q    + PSR     PT P  +C+      NQ E S+  S  P  +TT   L  C R   
Sbjct: 21  QRRMVRSPSRSATTSPTSPPSSCVS--SEMNQDEPSVRYSTSP--ETTSMVLVGCPRCLM 76

Query: 518 YLKL 529
           Y+ L
Sbjct: 77  YVML 80


>At4g13290.1 68417.m02078 cytochrome P450 71A19, putative (CYP71A19)
           Identical to Cytochrome P450 (SP:Q9T0K0) [Arabidopsis
           thaliana]; similar to cytochrome P450LXXIA1, Persea
           americana, M32885
          Length = 490

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -3

Query: 371 GVMVPFVYELDSLLGEDHSKLDGEVRFDDFL 279
           G  +P +  +D + G+DH   + + RFD+FL
Sbjct: 221 GEYIPSLSWIDKIRGQDHKMEEVDKRFDEFL 251


>At1g56660.1 68414.m06516 expressed protein
          Length = 522

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +3

Query: 174 EGKEGRGYQGSREASDRKRQEEHHGLRYQLWTKDGKE 284
           +GK+ +G +G  E  D ++++EH     ++  KD K+
Sbjct: 213 KGKKEKGEKGDLEKEDEEKKKEHDETDQEMKEKDSKK 249


>At5g01460.1 68418.m00059 LMBR1 integral membrane family protein
           contains Pfam PF04791: LMBR1-like conserved region
          Length = 509

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = +3

Query: 168 ISEGKE-GRGYQGSREASDRKRQEEHHGLRYQLWTKDGKEIVKSYFPIQFRVIFTEQ 335
           I E  E G+  +  ++A+D   QEE  G + + W K+ K + K    ++  V   E+
Sbjct: 253 IKEATELGKKARDLKKAADALHQEERSGAKGRKWRKNVKAVEKELLQLEEDVNLLEE 309


>At3g08930.2 68416.m01039 LMBR1 integral membrane family protein
           contains 5 transmembrane domains; contains Pfam PF04791:
           LMBR1-like conserved region; similar to unknown protein
           GB:BAA83351 [Oryza sativa]
          Length = 526

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = +3

Query: 168 ISEGKE-GRGYQGSREASDRKRQEEHHGLRYQLWTKDGKEIVKSYFPIQFRVIFTEQ 335
           I E  E G+  +  ++A+D   QEE  G + + W K+ K + K    ++  V   E+
Sbjct: 270 IKEATELGKKARELKKAADGLHQEERSGAKGRKWRKNVKAVEKELLQLEEDVNLLEE 326


>At3g08930.1 68416.m01040 LMBR1 integral membrane family protein
           contains 5 transmembrane domains; contains Pfam PF04791:
           LMBR1-like conserved region; similar to unknown protein
           GB:BAA83351 [Oryza sativa]
          Length = 310

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = +3

Query: 168 ISEGKE-GRGYQGSREASDRKRQEEHHGLRYQLWTKDGKEIVKSYFPIQFRVIFTEQ 335
           I E  E G+  +  ++A+D   QEE  G + + W K+ K + K    ++  V   E+
Sbjct: 54  IKEATELGKKARELKKAADGLHQEERSGAKGRKWRKNVKAVEKELLQLEEDVNLLEE 110


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,643,987
Number of Sequences: 28952
Number of extensions: 239427
Number of successful extensions: 876
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 987020800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)