Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20189
         (474 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.1  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    23   1.9  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   1.9  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   1.9  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   2.5  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   7.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 262  WSTATSCGSATDSTLSESTSPITLD 336
            W   T C     ST++ ST+P+  D
Sbjct: 2278 WPENTECHPDASSTMAPSTTPMVPD 2302



 Score = 21.8 bits (44), Expect = 3.3
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = +1

Query: 238  SLTEVGTPWSTATSCGSATDSTLSESTSPITLDSSWP 348
            S T     W+T T+  + T    + ST+     ++WP
Sbjct: 1044 SSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTNWP 1080


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 231 NLIIDGSRNTMEYCYKL 281
           +++   SR T E CYKL
Sbjct: 233 DVVASNSRKTAEMCYKL 249


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 13/45 (28%), Positives = 18/45 (40%)
 Frame = +3

Query: 324 YNFRLIMAGNFVKLIYRNYNLALKLGPTLDPANERLAYGDGKEKN 458
           Y   L      V L +  YNL+L +    D  N      + +EKN
Sbjct: 169 YTLHLFCVLYVVLLHFLTYNLSLGIKLRYDDVNNLFRIEESEEKN 213


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 13/45 (28%), Positives = 18/45 (40%)
 Frame = +3

Query: 324 YNFRLIMAGNFVKLIYRNYNLALKLGPTLDPANERLAYGDGKEKN 458
           Y   L      V L +  YNL+L +    D  N      + +EKN
Sbjct: 169 YTLHLFCVLYVVLLHFLTYNLSLGIKLRYDDVNNLFRIEESEEKN 213


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 316 YFLTMCCPLPTHSL*QYSMVFRLP 245
           Y  T+  PL    L  Y+M FR+P
Sbjct: 323 YDSTITAPLSNPPLWPYTMYFRMP 346


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -1

Query: 291 CRPTACSSTPWCSD 250
           CRP AC +   C D
Sbjct: 264 CRPGACHNNGTCLD 277


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,278
Number of Sequences: 336
Number of extensions: 1879
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11036865
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)