Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20189
(474 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT004890-1|AAO47868.1| 824|Drosophila melanogaster RE52324p pro... 31 1.1
AY052142-1|AAK93566.1| 1367|Drosophila melanogaster SD09926p pro... 31 1.1
AF097636-1|AAF63187.1| 1368|Drosophila melanogaster bicoid-inter... 31 1.1
AE013599-166|AAM68350.1| 1367|Drosophila melanogaster CG8276-PB,... 31 1.1
AE013599-165|AAF57267.2| 1367|Drosophila melanogaster CG8276-PA,... 31 1.1
AE014134-2265|AAF53230.1| 255|Drosophila melanogaster CG16800-P... 29 3.2
AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA... 29 4.2
L04960-2|AAF01347.1| 2711|Drosophila melanogaster fat facets sho... 28 7.4
L04960-1|AAF01348.1| 2747|Drosophila melanogaster fat facets lon... 28 7.4
L04959-1|AAF01345.1| 2747|Drosophila melanogaster fat facets lon... 28 7.4
L04958-1|AAF01346.1| 2711|Drosophila melanogaster fat facets sho... 28 7.4
AE014297-4810|AAN14291.1| 2711|Drosophila melanogaster CG1945-PC... 28 7.4
AE014297-4809|AAF57198.1| 2778|Drosophila melanogaster CG1945-PA... 28 7.4
AF181632-1|AAD55418.1| 798|Drosophila melanogaster BcDNA.GH0509... 27 9.8
AE014297-1633|AAF54906.1| 812|Drosophila melanogaster CG17319-P... 27 9.8
AE013599-2539|AAF57810.2| 798|Drosophila melanogaster CG6424-PB... 27 9.8
AE013599-2538|AAM68485.1| 798|Drosophila melanogaster CG6424-PA... 27 9.8
>BT004890-1|AAO47868.1| 824|Drosophila melanogaster RE52324p
protein.
Length = 824
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +1
Query: 172 SELGIREPRQGLHHPECKLTT*SLTEVGTPWSTATSCGSATDSTLSESTSPITLDSS 342
+E+G ++ + +H P+ TT + E+ TP T+ + +AT +S T SS
Sbjct: 475 AEMGQQQEQAHVHSPQSASTTTTAAEMPTPTPTSAAAATATAEHKEQSAPAPTATSS 531
>AY052142-1|AAK93566.1| 1367|Drosophila melanogaster SD09926p
protein.
Length = 1367
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +1
Query: 172 SELGIREPRQGLHHPECKLTT*SLTEVGTPWSTATSCGSATDSTLSESTSPITLDSS 342
+E+G ++ + +H P+ TT + E+ TP T+ + +AT +S T SS
Sbjct: 475 AEMGQQQEQAHVHSPQSASTTTTAAEMPTPTPTSAAAATATAEHKEQSAPAPTATSS 531
>AF097636-1|AAF63187.1| 1368|Drosophila melanogaster
bicoid-interacting protein BIN3 protein.
Length = 1368
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +1
Query: 172 SELGIREPRQGLHHPECKLTT*SLTEVGTPWSTATSCGSATDSTLSESTSPITLDSS 342
+E+G ++ + +H P+ TT + E+ TP T+ + +AT +S T SS
Sbjct: 475 AEMGQQQEQAHVHSPQSASTTTTAAEMPTPTPTSAAAATATAEHKEQSAPAPTATSS 531
>AE013599-166|AAM68350.1| 1367|Drosophila melanogaster CG8276-PB,
isoform B protein.
Length = 1367
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +1
Query: 172 SELGIREPRQGLHHPECKLTT*SLTEVGTPWSTATSCGSATDSTLSESTSPITLDSS 342
+E+G ++ + +H P+ TT + E+ TP T+ + +AT +S T SS
Sbjct: 475 AEMGQQQEQAHVHSPQSASTTTTAAEMPTPTPTSAAAATATAEHKEQSAPAPTATSS 531
>AE013599-165|AAF57267.2| 1367|Drosophila melanogaster CG8276-PA,
isoform A protein.
Length = 1367
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +1
Query: 172 SELGIREPRQGLHHPECKLTT*SLTEVGTPWSTATSCGSATDSTLSESTSPITLDSS 342
+E+G ++ + +H P+ TT + E+ TP T+ + +AT +S T SS
Sbjct: 475 AEMGQQQEQAHVHSPQSASTTTTAAEMPTPTPTSAAAATATAEHKEQSAPAPTATSS 531
>AE014134-2265|AAF53230.1| 255|Drosophila melanogaster CG16800-PA
protein.
Length = 255
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 88 RGHFSDAGADGEHARREHHEKFH 20
+GH G GEH E HEK H
Sbjct: 78 KGHHDKEGKKGEHGEEEGHEKKH 100
>AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA
protein.
Length = 2284
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -1
Query: 327 YRGSTF*QCAVRCRPTACSSTPWCS 253
Y GST +C R RPT +S P CS
Sbjct: 499 YPGSTDPECQPRTRPTITTSQPRCS 523
>L04960-2|AAF01347.1| 2711|Drosophila melanogaster fat facets short
isoform protein.
Length = 2711
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 253 GTPWSTATSCGSATDSTLSESTSP 324
G P STA S S+T ST + +TSP
Sbjct: 11 GQPGSTAPSSSSSTTSTTTTTTSP 34
>L04960-1|AAF01348.1| 2747|Drosophila melanogaster fat facets long
isoform protein.
Length = 2747
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 253 GTPWSTATSCGSATDSTLSESTSP 324
G P STA S S+T ST + +TSP
Sbjct: 11 GQPGSTAPSSSSSTTSTTTTTTSP 34
>L04959-1|AAF01345.1| 2747|Drosophila melanogaster fat facets long
isoform protein.
Length = 2747
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 253 GTPWSTATSCGSATDSTLSESTSP 324
G P STA S S+T ST + +TSP
Sbjct: 11 GQPGSTAPSSSSSTTSTTTTTTSP 34
>L04958-1|AAF01346.1| 2711|Drosophila melanogaster fat facets short
isoform protein.
Length = 2711
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 253 GTPWSTATSCGSATDSTLSESTSP 324
G P STA S S+T ST + +TSP
Sbjct: 11 GQPGSTAPSSSSSTTSTTTTTTSP 34
>AE014297-4810|AAN14291.1| 2711|Drosophila melanogaster CG1945-PC,
isoform C protein.
Length = 2711
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 253 GTPWSTATSCGSATDSTLSESTSP 324
G P STA S S+T ST + +TSP
Sbjct: 11 GQPGSTAPSSSSSTTSTTTTTTSP 34
>AE014297-4809|AAF57198.1| 2778|Drosophila melanogaster CG1945-PA,
isoform A protein.
Length = 2778
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 253 GTPWSTATSCGSATDSTLSESTSP 324
G P STA S S+T ST + +TSP
Sbjct: 11 GQPGSTAPSSSSSTTSTTTTTTSP 34
>AF181632-1|AAD55418.1| 798|Drosophila melanogaster BcDNA.GH05095
protein.
Length = 798
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 205 LHHPECKLTT*SLTEVGTPWSTATSCGSATDSTLSESTS 321
+ HP L L+ + S+ SCGSA S+ S S+S
Sbjct: 1 MRHPTTGLNEDDLSRLTGSSSSTASCGSAASSSSSSSSS 39
>AE014297-1633|AAF54906.1| 812|Drosophila melanogaster CG17319-PA
protein.
Length = 812
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +1
Query: 175 ELGIREPRQGLHHPECKLTT*SLTEVGTPWS 267
E GIR+P P C LT S T TP S
Sbjct: 183 ECGIRKPENDTKPPSCSLTRASATLTTTPRS 213
>AE013599-2539|AAF57810.2| 798|Drosophila melanogaster CG6424-PB,
isoform B protein.
Length = 798
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 205 LHHPECKLTT*SLTEVGTPWSTATSCGSATDSTLSESTS 321
+ HP L L+ + S+ SCGSA S+ S S+S
Sbjct: 1 MRHPTTGLNEDDLSRLTGSSSSTASCGSAASSSSSSSSS 39
>AE013599-2538|AAM68485.1| 798|Drosophila melanogaster CG6424-PA,
isoform A protein.
Length = 798
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 205 LHHPECKLTT*SLTEVGTPWSTATSCGSATDSTLSESTS 321
+ HP L L+ + S+ SCGSA S+ S S+S
Sbjct: 1 MRHPTTGLNEDDLSRLTGSSSSTASCGSAASSSSSSSSS 39
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,800,069
Number of Sequences: 53049
Number of extensions: 383701
Number of successful extensions: 1531
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1519
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1622204766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -