Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20188
(430 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 108 2e-24
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 108 2e-24
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 108 2e-24
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 107 5e-24
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 79 2e-15
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 72 2e-13
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 6e-10
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 8e-10
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 1e-09
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 59 2e-09
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 59 2e-09
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 59 2e-09
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 59 2e-09
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 3e-09
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 4e-09
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 2e-05
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 40 7e-04
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 9e-04
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 37 0.008
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.033
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 34 0.044
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 33 0.10
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 33 0.13
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 30 0.71
SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8) 27 5.0
SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4) 27 5.0
SB_32931| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.1) 27 8.7
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 108 bits (260), Expect = 2e-24
Identities = 47/54 (87%), Positives = 50/54 (92%)
Frame = +2
Query: 92 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEA 253
MREIVH QAGQCGNQIGAKFWE+IS+EHGIDPTG Y G SDLQLERI+VYYNEA
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEA 54
Score = 82.2 bits (194), Expect = 2e-16
Identities = 40/67 (59%), Positives = 47/67 (70%)
Frame = +1
Query: 229 DLCLLQ*GLVATAESGGKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGN 408
DL L + + +GGKYVPRAIL+DLEPGTMD+VRSG +GQ+F S GAGN
Sbjct: 41 DLQLERINVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQS-GAGN 99
Query: 409 NWAKGHY 429
NWAKGHY
Sbjct: 100 NWAKGHY 106
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 108 bits (260), Expect = 2e-24
Identities = 47/54 (87%), Positives = 50/54 (92%)
Frame = +2
Query: 92 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEA 253
MREIVH QAGQCGNQIGAKFWE+IS+EHGIDPTG Y G SDLQLERI+VYYNEA
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEA 54
Score = 60.5 bits (140), Expect = 6e-10
Identities = 28/45 (62%), Positives = 35/45 (77%)
Frame = +1
Query: 229 DLCLLQ*GLVATAESGGKYVPRAILLDLEPGTMDAVRSGAYGQLF 363
DL L + + +GGKYVPRAIL+DLEPGTMD+VRSG +GQ+F
Sbjct: 41 DLQLERINVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIF 85
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 108 bits (260), Expect = 2e-24
Identities = 47/54 (87%), Positives = 50/54 (92%)
Frame = +2
Query: 92 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEA 253
MREIVH QAGQCGNQIGAKFWE+IS+EHGIDPTG Y G SDLQLERI+VYYNEA
Sbjct: 214 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEA 267
Score = 81.8 bits (193), Expect = 2e-16
Identities = 39/67 (58%), Positives = 47/67 (70%)
Frame = +1
Query: 229 DLCLLQ*GLVATAESGGKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGN 408
DL L + + +GGKYVPRA+L+DLEPGTMD+VRSG +GQ+F S GAGN
Sbjct: 254 DLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQS-GAGN 312
Query: 409 NWAKGHY 429
NWAKGHY
Sbjct: 313 NWAKGHY 319
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 107 bits (256), Expect = 5e-24
Identities = 47/54 (87%), Positives = 50/54 (92%)
Frame = +2
Query: 92 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEA 253
MREIV LQAGQCGNQIGAKFWE+IS+EHGIDPTG Y G SDLQLERI+VYYNEA
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEA 54
Score = 81.0 bits (191), Expect = 4e-16
Identities = 38/67 (56%), Positives = 47/67 (70%)
Frame = +1
Query: 229 DLCLLQ*GLVATAESGGKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGN 408
DL L + + +GGKYVPR++L+DLEPGTMD+VRSG +GQ+F S GAGN
Sbjct: 41 DLQLERINVYYNEATGGKYVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQS-GAGN 99
Query: 409 NWAKGHY 429
NWAKGHY
Sbjct: 100 NWAKGHY 106
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 78.6 bits (185), Expect = 2e-15
Identities = 35/51 (68%), Positives = 40/51 (78%)
Frame = +1
Query: 277 GKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
GKYVPRA+L+DLEPGTMD+VRSG +GQ+F S GAGNNWAKGHY
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQS-GAGNNWAKGHY 51
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 72.1 bits (169), Expect = 2e-13
Identities = 33/53 (62%), Positives = 38/53 (71%)
Frame = +1
Query: 271 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
+GG+YVPR+IL+DLEPGTMDAVR G G +F S GA NNWAKGHY
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQS-GAANNWAKGHY 62
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 60.5 bits (140), Expect = 6e-10
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = +1
Query: 265 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
AE+G GK+VPRA+ +DLEP +D +R+G Y QLF QL L A NN+A+GHY
Sbjct: 19 AETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQL-LSGKEDAANNYARGHY 73
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 60.1 bits (139), Expect = 8e-10
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = +1
Query: 265 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
AE+G GK+VPRA+ +DLEP +D VR+G Y QLF QL + A NN+A+GHY
Sbjct: 425 AETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQL-ITGKEDAANNYARGHY 479
Score = 58.0 bits (134), Expect = 3e-09
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Frame = +1
Query: 265 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
+E+G GK+VPRA+ DLEP +D VR+G Y QLF QL + A NN+A+GHY
Sbjct: 858 SETGAGKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQL-ITGKEDAANNYARGHY 912
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 95 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 193
RE + + GQ G QIG WE+ EHGI P G
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDG 405
Score = 36.7 bits (81), Expect = 0.008
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 95 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 193
RE + + GQ G Q+G WE+ EHGI P G
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDG 838
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 59.3 bits (137), Expect = 1e-09
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = +1
Query: 265 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
+E+G GK+VPRA+ +DLEP +D +R+G Y QLF QL + A NN+A+GHY
Sbjct: 472 SETGAGKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQL-ITGKEDAANNYARGHY 526
Score = 58.0 bits (134), Expect = 3e-09
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Frame = +1
Query: 265 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
+E+G GK+VPRA+ DLEP +D VR+G Y QLF QL + A NN+A+GHY
Sbjct: 39 SETGAGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQL-ITGKEDAANNYARGHY 93
Score = 37.5 bits (83), Expect = 0.005
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 95 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 193
RE V + GQ G Q+G WE+ EHGI P G
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDG 452
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 58.8 bits (136), Expect = 2e-09
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = +1
Query: 265 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
+E+G GK+VPRA+ +DLEP +D VR+G Y QLF QL + A NN+A+GHY
Sbjct: 53 SETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQL-ITGKEDAANNYARGHY 107
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 95 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 193
RE + + GQ G QIG WE+ EHGI P G
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDG 33
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 58.8 bits (136), Expect = 2e-09
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = +1
Query: 265 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
+E+G GK+VPRA+ +DLEP +D VR+G Y QLF QL + A NN+A+GHY
Sbjct: 487 SETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQL-ITGKEDAANNYARGHY 541
Score = 58.4 bits (135), Expect = 2e-09
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = +1
Query: 265 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
+E+G GK+VPRA+ +DLEP +D VR+G Y QLF QL + A NN+A+GHY
Sbjct: 54 SETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQL-VTGKEDAANNYARGHY 108
Score = 40.3 bits (90), Expect = 7e-04
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +2
Query: 92 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 193
MRE + + GQ G QIG WE+ EHGI P G
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 95 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 193
RE + + GQ G QIG WE+ EHGI P G
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDG 467
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 58.8 bits (136), Expect = 2e-09
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = +1
Query: 265 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
+E+G GK+VPRA+ +DLEP +D VR+G Y QLF QL + A NN+A+GHY
Sbjct: 118 SETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQL-ITGKEDAANNYARGHY 172
Score = 58.8 bits (136), Expect = 2e-09
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = +1
Query: 265 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
+E+G GK+VPRA+ +DLEP +D VR+G Y QLF QL + A NN+A+GHY
Sbjct: 639 SETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQL-ITGKEDAANNYARGHY 693
Score = 40.7 bits (91), Expect = 5e-04
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +2
Query: 89 TMREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 193
T+RE + + GQ G QIG WE+ EHGI P G
Sbjct: 585 TVRECISIHVGQAGVQIGNACWELYCLEHGIQPDG 619
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +2
Query: 77 FXVXTMREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 193
F + RE + + GQ G QIG WE+ EHGI P G
Sbjct: 60 FILILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDG 98
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2
Query: 83 VXTMREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 193
V RE + + GQ G QIG WE+ EHGI P G
Sbjct: 510 VEYQRECISIHVGQAGVQIGNACWELYCLEHGIQPDG 546
Score = 29.5 bits (63), Expect = 1.2
Identities = 12/25 (48%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +1
Query: 265 AESG-GKYVPRAILLDLEPGTMDAV 336
+E+G GK+VPRA+ +DLEP + +
Sbjct: 566 SETGAGKHVPRAVFVDLEPTVRECI 590
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 58.8 bits (136), Expect = 2e-09
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = +1
Query: 265 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
+E+G GK+VPRA+ +DLEP +D VR+G Y QLF QL + A NN+A+GHY
Sbjct: 54 SETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQL-ITGKEDAANNYARGHY 108
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +2
Query: 92 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 193
MRE + + GQ G Q+G WE+ EHGI P G
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDG 34
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 58.0 bits (134), Expect = 3e-09
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Frame = +1
Query: 265 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
+E+G GK+VPRA+ DLEP +D VR+G Y QLF QL + A NN+A+GHY
Sbjct: 54 SETGSGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQL-ITGKEDAANNYARGHY 108
Score = 38.7 bits (86), Expect = 0.002
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +2
Query: 92 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 193
MRE + + GQ G Q+G WE+ EHGI P G
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDG 34
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 57.6 bits (133), Expect = 4e-09
Identities = 27/60 (45%), Positives = 38/60 (63%)
Frame = +1
Query: 250 GLVATAESGGKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
G + + GKYVPRA+L+DLEP +D VR+G Y L+ Q+ + A NN+A+GHY
Sbjct: 961 GSKTSEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQM-ISGKEDAANNYARGHY 1019
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 45.2 bits (102), Expect = 2e-05
Identities = 19/37 (51%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Frame = +2
Query: 149 FWEIISEEHGIDPTGVYRGT-SDLQLERISVYYNEAL 256
FWE+I+EEHGIDP G S +Q +R++VY++E L
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDERL 37
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +2
Query: 83 VXTMREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 193
+ TMRE + + GQ G QIG WE+ EHGI P G
Sbjct: 193 IQTMRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG 229
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 40.3 bits (90), Expect = 7e-04
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +2
Query: 92 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 193
MRE + + GQ G QIG WE+ EHGI P G
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
Score = 31.5 bits (68), Expect = 0.31
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 265 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
+E+G GK+VPRA+ +DLEP T+ A+ + + + A NN+A+GHY
Sbjct: 54 SETGAGKHVPRAVFVDLEP-TVVAL----------SPEQLITGKEDAANNYARGHY 98
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 39.9 bits (89), Expect = 9e-04
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +2
Query: 92 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 193
MRE + + GQ G QIG WE+ EHGI P G
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDG 34
Score = 31.1 bits (67), Expect = 0.41
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 274 GGKYVPRAILLDLEPGTMDAVR 339
GGK+VPRA+ +DLEP + ++
Sbjct: 58 GGKHVPRAVFVDLEPSVVGRMK 79
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 36.7 bits (81), Expect = 0.008
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +1
Query: 292 RAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNW 414
RA+L+D+E G ++ + G +F QL VS G GNNW
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVS-GCGNNW 115
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 34.7 bits (76), Expect = 0.033
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +1
Query: 328 DAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
D VR+G Y QLF QL + A NN+A+GHY
Sbjct: 13 DEVRTGTYRQLFHPEQL-ITGKEDAANNYARGHY 45
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 34.3 bits (75), Expect = 0.044
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +2
Query: 101 IVHLQAGQCGNQIGAKFWEIISEE 172
IV LQ GQCGNQIG + +++I E+
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 33.1 bits (72), Expect = 0.10
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 334 VRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
+R+G Y QLF QL L A NN+A+GHY
Sbjct: 3 IRTGTYRQLFHPEQL-LSGKEDAANNYARGHY 33
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 32.7 bits (71), Expect = 0.13
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 334 VRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
VR+G Y QLF QL + A NN+A+GHY
Sbjct: 3 VRTGTYRQLFHPEQL-ITGKEDAANNYARGHY 33
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 32.7 bits (71), Expect = 0.13
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 334 VRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
VR+G Y QLF QL + A NN+A+GHY
Sbjct: 3 VRTGTYRQLFHPEQL-ITGKEDAANNYARGHY 33
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 30.3 bits (65), Expect = 0.71
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 334 VRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
VR G Y LF QL + A NN+A+GHY
Sbjct: 3 VRMGTYRDLFHPDQL-ITGKEDAANNYARGHY 33
>SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8)
Length = 582
Score = 27.5 bits (58), Expect = 5.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 89 TMREIVHLQAGQCGNQIGAKFWEI 160
T+RE++ LQ G N +G +W I
Sbjct: 26 TVREVITLQFGHYANFVGTHWWNI 49
>SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4)
Length = 582
Score = 27.5 bits (58), Expect = 5.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 89 TMREIVHLQAGQCGNQIGAKFWEI 160
T+RE++ LQ G N +G +W I
Sbjct: 26 TVREVITLQFGHYANFVGTHWWNI 49
>SB_32931| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.1)
Length = 815
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 164 ILSPRIWRRSGYRTVRPAGALFPS 93
I +P W +G+ T P G L+PS
Sbjct: 88 IYAPPHWENTGHLTTPPTGFLYPS 111
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,249,217
Number of Sequences: 59808
Number of extensions: 149088
Number of successful extensions: 394
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 372
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 826502419
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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