Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20188
(430 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 109 6e-25
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 105 1e-23
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 105 2e-23
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 105 2e-23
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 102 1e-22
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 101 3e-22
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 82 1e-16
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 82 1e-16
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 58 2e-09
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 58 4e-09
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 57 6e-09
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 56 1e-08
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 56 1e-08
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 56 1e-08
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 56 1e-08
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 56 1e-08
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 55 2e-08
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 55 2e-08
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 55 2e-08
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 55 2e-08
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 54 3e-08
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 54 3e-08
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 51 4e-07
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 51 4e-07
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 43 8e-05
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 43 8e-05
Z92790-2|CAB07224.2| 377|Caenorhabditis elegans Hypothetical pr... 28 3.3
AL032626-7|CAA21544.1| 79|Caenorhabditis elegans Hypothetical ... 26 10.0
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 109 bits (263), Expect = 6e-25
Identities = 47/54 (87%), Positives = 51/54 (94%)
Frame = +2
Query: 92 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEA 253
MREIVH+QAGQCGNQIGAKFWE+IS+EHGIDPTG Y G SDLQLERI+VYYNEA
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEA 54
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/67 (59%), Positives = 46/67 (68%)
Frame = +1
Query: 229 DLCLLQ*GLVATAESGGKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGN 408
DL L + + SGGKYVPRA L+DLEPGTMD+VR+G +GQLF S GAGN
Sbjct: 41 DLQLERINVYYNEASGGKYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQS-GAGN 99
Query: 409 NWAKGHY 429
NWAKGHY
Sbjct: 100 NWAKGHY 106
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 105 bits (252), Expect = 1e-23
Identities = 45/54 (83%), Positives = 50/54 (92%)
Frame = +2
Query: 92 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEA 253
MREIVH+QAGQCGNQIGAKFWE+IS+EHGI P G Y+G SDLQLERI+VYYNEA
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEA 54
Score = 82.6 bits (195), Expect = 1e-16
Identities = 40/67 (59%), Positives = 47/67 (70%)
Frame = +1
Query: 229 DLCLLQ*GLVATAESGGKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGN 408
DL L + + +GGKYVPRA+L+DLEPGTMD+VRSG +GQLF S GAGN
Sbjct: 41 DLQLERINVYYNEANGGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQS-GAGN 99
Query: 409 NWAKGHY 429
NWAKGHY
Sbjct: 100 NWAKGHY 106
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 105 bits (251), Expect = 2e-23
Identities = 45/54 (83%), Positives = 51/54 (94%)
Frame = +2
Query: 92 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEA 253
MREIVH+QAGQCGNQIG+KFWE+IS+EHGIDP+G Y G SDLQLERI+VYYNEA
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEA 54
Score = 77.0 bits (181), Expect = 5e-15
Identities = 37/55 (67%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Frame = +1
Query: 268 ESGG-KYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
E+G KYVPRA+L+DLEPGTMD+VRSG +GQLF S GAGNNWAKGHY
Sbjct: 53 EAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQS-GAGNNWAKGHY 106
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 105 bits (251), Expect = 2e-23
Identities = 45/54 (83%), Positives = 51/54 (94%)
Frame = +2
Query: 92 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEA 253
MREIVH+QAGQCGNQIG+KFWE+IS+EHGIDP+G Y G SDLQLERI+VYYNEA
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEA 54
Score = 77.0 bits (181), Expect = 5e-15
Identities = 37/55 (67%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Frame = +1
Query: 268 ESGG-KYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
E+G KYVPRA+L+DLEPGTMD+VRSG +GQLF S GAGNNWAKGHY
Sbjct: 53 EAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQS-GAGNNWAKGHY 106
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 102 bits (244), Expect = 1e-22
Identities = 43/54 (79%), Positives = 49/54 (90%)
Frame = +2
Query: 92 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEA 253
MREIVH+QAGQCGNQIG+KFWE+IS+EHGI P G ++G SDLQLERI VYYNEA
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEA 54
Score = 79.8 bits (188), Expect = 8e-16
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = +1
Query: 271 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
+ GKYVPRA+L+DLEPGTMD+VRSG +GQLF S GAGNNWAKGHY
Sbjct: 55 NNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQS-GAGNNWAKGHY 106
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 101 bits (241), Expect = 3e-22
Identities = 42/54 (77%), Positives = 49/54 (90%)
Frame = +2
Query: 92 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEA 253
MREIVH+QAGQCGNQIG+KFWE+IS+EHGI P G ++G +DLQLERI VYYNEA
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEA 54
Score = 79.8 bits (188), Expect = 8e-16
Identities = 36/53 (67%), Positives = 41/53 (77%)
Frame = +1
Query: 271 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
+ GKYVPRA+L+DLEPGTMD+VRSG +GQLF S GAGNNWAKGHY
Sbjct: 55 NNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQS-GAGNNWAKGHY 106
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 82.2 bits (194), Expect = 1e-16
Identities = 34/53 (64%), Positives = 42/53 (79%)
Frame = +2
Query: 92 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNE 250
M+EI+++Q GQCGNQIGAKFWE ISEEHG+ G Y+G + QLERI+ YY E
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKE 53
Score = 58.4 bits (135), Expect = 2e-09
Identities = 27/52 (51%), Positives = 38/52 (73%)
Frame = +1
Query: 274 GGKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
G KYVPRAIL+DL+P +++ VRS YG+LF + + GAGNNW++G+Y
Sbjct: 56 GRKYVPRAILVDLDPESINYVRSTQYGKLFDP-ENAVSGESGAGNNWSRGYY 106
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 82.2 bits (194), Expect = 1e-16
Identities = 34/53 (64%), Positives = 42/53 (79%)
Frame = +2
Query: 92 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNE 250
M+EI+++Q GQCGNQIGAKFWE ISEEHG+ G Y+G + QLERI+ YY E
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKE 53
Score = 58.4 bits (135), Expect = 2e-09
Identities = 27/52 (51%), Positives = 38/52 (73%)
Frame = +1
Query: 274 GGKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
G KYVPRAIL+DL+P +++ VRS YG+LF + + GAGNNW++G+Y
Sbjct: 56 GRKYVPRAILVDLDPESINYVRSTQYGKLFDP-ENAVSGESGAGNNWSRGYY 106
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 58.4 bits (135), Expect = 2e-09
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +1
Query: 277 GKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
GK+VPRAI +DLEP +D +R+G YG LF Q+ + A NN+A+GHY
Sbjct: 62 GKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQI-INGKEDAANNYARGHY 111
Score = 38.3 bits (85), Expect = 0.002
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 95 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYR-GTSDLQLERISVYYNEAL 256
RE V + GQ G QIG WE+ EHG+D G + + + + + +++E++
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESM 60
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 57.6 bits (133), Expect = 4e-09
Identities = 27/51 (52%), Positives = 35/51 (68%)
Frame = +1
Query: 277 GKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
GK+VPRAI +DLEP +D VR+G Y +LF QL + A NN+A+GHY
Sbjct: 59 GKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQL-ISGKEDAANNYARGHY 108
Score = 42.3 bits (95), Expect = 1e-04
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = +2
Query: 92 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGV 196
MREIV + GQ G QIG WE+ EHGI P G+
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGL 35
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 56.8 bits (131), Expect = 6e-09
Identities = 27/51 (52%), Positives = 35/51 (68%)
Frame = +1
Query: 277 GKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
GK+VPRAI++DLEP +D +R+G Y LF QL L A NN+A+GHY
Sbjct: 64 GKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQL-LTGKEDAANNYARGHY 113
Score = 39.9 bits (89), Expect = 8e-04
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +2
Query: 95 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQL--ERISVYYNEAL 256
RE++ + GQ G Q+G WE+ EHGI P G+ L + + + +++E +
Sbjct: 7 REVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETM 62
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 56.0 bits (129), Expect = 1e-08
Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = +1
Query: 265 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
+E+G G++VPRA+++DLEP +D +R+G Y LF QL + A NN+A+GHY
Sbjct: 54 SETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQL-ITGKEDAANNYARGHY 108
Score = 41.5 bits (93), Expect = 2e-04
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +2
Query: 92 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 193
MRE++ + GQ G QIG WE+ EHGI P G
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDG 34
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 56.0 bits (129), Expect = 1e-08
Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = +1
Query: 265 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
+E+G G++VPRA+++DLEP +D +R+G Y LF QL + A NN+A+GHY
Sbjct: 53 SETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQL-ITGKEDAANNYARGHY 107
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +2
Query: 95 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 193
RE++ + GQ G QIG WE+ EHGI P G
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDG 33
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 56.0 bits (129), Expect = 1e-08
Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = +1
Query: 265 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
+E+G G++VPRA+++DLEP +D +R+G Y LF QL + A NN+A+GHY
Sbjct: 54 SETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQL-ITGKEDAANNYARGHY 108
Score = 41.5 bits (93), Expect = 2e-04
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +2
Query: 92 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 193
MRE++ + GQ G QIG WE+ EHGI P G
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDG 34
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 56.0 bits (129), Expect = 1e-08
Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = +1
Query: 265 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
+E+G G++VPRA+++DLEP +D +R+G Y LF QL + A NN+A+GHY
Sbjct: 54 SETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQL-ITGKEDAANNYARGHY 108
Score = 41.5 bits (93), Expect = 2e-04
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +2
Query: 92 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 193
MRE++ + GQ G QIG WE+ EHGI P G
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDG 34
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 55.6 bits (128), Expect = 1e-08
Identities = 25/51 (49%), Positives = 36/51 (70%)
Frame = +1
Query: 277 GKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
G++VPR+I +DLEP +D +R+GAY +LF Q+ L A NN+A+GHY
Sbjct: 56 GRHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQM-LTGKEDAANNYARGHY 105
Score = 40.3 bits (90), Expect = 6e-04
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +2
Query: 92 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 193
MRE++ + GQ G QIG WE+ EHGI P G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG 34
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 55.2 bits (127), Expect = 2e-08
Identities = 24/51 (47%), Positives = 35/51 (68%)
Frame = +1
Query: 277 GKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
G+YVPR+I +DLEP +D +R+G Y +LF Q+ + A NN+A+GHY
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQM-ITGKEDAANNYARGHY 106
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +2
Query: 92 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNE 250
MRE++ + GQ G QIG WE+ EHGI P G S + E + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSD 53
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 55.2 bits (127), Expect = 2e-08
Identities = 24/51 (47%), Positives = 35/51 (68%)
Frame = +1
Query: 277 GKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
G+YVPR+I +DLEP +D +R+G Y +LF Q+ + A NN+A+GHY
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQM-ITGKEDAANNYARGHY 106
Score = 44.0 bits (99), Expect = 5e-05
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +2
Query: 92 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNE 250
MRE++ + GQ G QIG WE+ EHGI P G E + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSD 53
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 55.2 bits (127), Expect = 2e-08
Identities = 24/51 (47%), Positives = 35/51 (68%)
Frame = +1
Query: 277 GKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
G+YVPR+I +DLEP +D +R+G Y +LF Q+ + A NN+A+GHY
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQM-ITGKEDAANNYARGHY 106
Score = 44.0 bits (99), Expect = 5e-05
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +2
Query: 92 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNE 250
MRE++ + GQ G QIG WE+ EHGI P G E + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSD 53
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 55.2 bits (127), Expect = 2e-08
Identities = 24/51 (47%), Positives = 35/51 (68%)
Frame = +1
Query: 277 GKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
G+YVPR+I +DLEP +D +R+G Y +LF Q+ + A NN+A+GHY
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQM-ITGKEDAANNYARGHY 106
Score = 44.4 bits (100), Expect = 4e-05
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +2
Query: 92 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNE 250
MRE++ + GQ G QIG WE+ EHGI P G S + E + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSD 53
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 54.4 bits (125), Expect = 3e-08
Identities = 24/51 (47%), Positives = 35/51 (68%)
Frame = +1
Query: 277 GKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
G+YVPR+I +DLEP +D +R+G Y +LF Q+ + A NN+A+GHY
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQM-ITGKEDAANNYARGHY 106
Score = 41.9 bits (94), Expect = 2e-04
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +2
Query: 92 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 193
MRE++ + GQ G QIG WE+ EHGI P G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 54.4 bits (125), Expect = 3e-08
Identities = 24/51 (47%), Positives = 35/51 (68%)
Frame = +1
Query: 277 GKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
G+YVPR+I +DLEP +D +R+G Y +LF Q+ + A NN+A+GHY
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQM-ITGKEDAANNYARGHY 106
Score = 41.9 bits (94), Expect = 2e-04
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +2
Query: 92 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 193
MRE++ + GQ G QIG WE+ EHGI P G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 50.8 bits (116), Expect = 4e-07
Identities = 25/53 (47%), Positives = 33/53 (62%)
Frame = +1
Query: 271 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
+GGK+VPR + +DLEP +D VR+G Y LF QL L A N +A+G Y
Sbjct: 63 AGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQL-LSGKEDAANCYARGRY 114
Score = 44.8 bits (101), Expect = 3e-05
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +2
Query: 95 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG--VYRGTSDLQLERISVYYNE 250
RE++ + GQ G QIG WE+ EHGI P G V T D + E I+ ++ E
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAE 61
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 50.8 bits (116), Expect = 4e-07
Identities = 25/53 (47%), Positives = 33/53 (62%)
Frame = +1
Query: 271 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFXAGQLXLPVSXGAGNNWAKGHY 429
+GGK+VPR + +DLEP +D VR+G Y LF QL L A N +A+G Y
Sbjct: 35 AGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQL-LSGKEDAANCYARGRY 86
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 43.2 bits (97), Expect = 8e-05
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Frame = +1
Query: 283 YVPRAILLDLEPGTMDA-VRSGAYGQLFXAGQLXL-PVSXGAGNNWAKGH 426
YVPRA+L+DLEP ++ ++S + LF + + GAGNNWA G+
Sbjct: 61 YVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASGY 110
Score = 39.9 bits (89), Expect = 8e-04
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +2
Query: 101 IVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYY 244
++ + GQCGNQ+ FW+ + +EHGI+ G D+ ++ ++Y
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY 54
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 43.2 bits (97), Expect = 8e-05
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Frame = +1
Query: 283 YVPRAILLDLEPGTMDA-VRSGAYGQLFXAGQLXL-PVSXGAGNNWAKGH 426
YVPRA+L+DLEP ++ ++S + LF + + GAGNNWA G+
Sbjct: 61 YVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASGY 110
Score = 39.9 bits (89), Expect = 8e-04
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +2
Query: 101 IVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYY 244
++ + GQCGNQ+ FW+ + +EHGI+ G D+ ++ ++Y
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY 54
>Z92790-2|CAB07224.2| 377|Caenorhabditis elegans Hypothetical
protein H03G16.2 protein.
Length = 377
Score = 27.9 bits (59), Expect = 3.3
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 116 AGQCGNQIGAKFWEIISEEHGIDPTGVYR 202
+G C ++G K WE+ SE G PTG+ +
Sbjct: 233 SGDCLKKMGKK-WEVTSEAVGPRPTGILK 260
>AL032626-7|CAA21544.1| 79|Caenorhabditis elegans Hypothetical
protein Y37D8A.8 protein.
Length = 79
Score = 26.2 bits (55), Expect = 10.0
Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
Frame = -2
Query: 153 QNLAPIWLPH---CPACRCTISLIV 88
+ +AP + P+ CP CRCT+ +V
Sbjct: 4 EKVAPSFKPYQEYCPRCRCTVVTVV 28
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,358,208
Number of Sequences: 27780
Number of extensions: 108299
Number of successful extensions: 323
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 297
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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