Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20187
         (487 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q83AN2 Cluster: Putative uncharacterized protein; n=5; ...    36   0.64 
UniRef50_A5FGI6 Cluster: Putative uncharacterized protein; n=1; ...    33   3.4  
UniRef50_UPI0000F20A4C Cluster: PREDICTED: hypothetical protein;...    32   7.9  
UniRef50_Q7YN60 Cluster: Ribosomal protein S2; n=1; Eimeria tene...    32   7.9  
UniRef50_A5K4U0 Cluster: Putative uncharacterized protein; n=1; ...    32   7.9  

>UniRef50_Q83AN2 Cluster: Putative uncharacterized protein; n=5;
           Coxiella burnetii|Rep: Putative uncharacterized protein
           - Coxiella burnetii
          Length = 541

 Score = 35.5 bits (78), Expect = 0.64
 Identities = 19/62 (30%), Positives = 36/62 (58%)
 Frame = -2

Query: 447 ITTQGESTIY*YIE*KYRTNKMIIIKNV*FFNLIYVFYLLLIKNVFYYYMTHMLLHLSMK 268
           I   G +T + Y +   RTN+  ++ +     L Y+FYLL   ++FY Y+ H+  HL+++
Sbjct: 295 IAILGTATFFIYKKTMDRTNQRRLLLSQALLLLAYIFYLL---SLFYIYLYHIQPHLALQ 351

Query: 267 IH 262
           ++
Sbjct: 352 LN 353


>UniRef50_A5FGI6 Cluster: Putative uncharacterized protein; n=1;
           Flavobacterium johnsoniae UW101|Rep: Putative
           uncharacterized protein - Flavobacterium johnsoniae
           UW101
          Length = 107

 Score = 33.1 bits (72), Expect = 3.4
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = -2

Query: 360 FFNLIYVFYLLLIKNVFYYYMTHMLLHLSMKIHQNN 253
           F NL +VFYL L+   F +Y  + +L++++   QNN
Sbjct: 32  FLNLSHVFYLRLLNVFFIFYGVNRILNINLAQGQNN 67


>UniRef50_UPI0000F20A4C Cluster: PREDICTED: hypothetical protein; n=1;
            Danio rerio|Rep: PREDICTED: hypothetical protein - Danio
            rerio
          Length = 1265

 Score = 31.9 bits (69), Expect = 7.9
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = -2

Query: 147  ILMKHSKLDTSIQSYVLRELTYSRXPLGSAPRI--ADVHGRRCNHSPSGGP 1
            +L KH +L T  + YV +   ++    G+  +   +  HG+RC   P+ GP
Sbjct: 922  MLRKHIRLHTDARPYVCQHCNFAFKTKGNLTKHMKSKAHGKRCPEGPAPGP 972


>UniRef50_Q7YN60 Cluster: Ribosomal protein S2; n=1; Eimeria
           tenella|Rep: Ribosomal protein S2 - Eimeria tenella
          Length = 233

 Score = 31.9 bits (69), Expect = 7.9
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = -2

Query: 387 KMIIIKNV*FFNLIYVFYLLLIKNVFYYYMTHMLLHLSMKIHQNN 253
           K+II   + +F L  +      KN+FY Y T  L++L +K+  NN
Sbjct: 110 KLIIYNWLRYFFLTNLIIKNNYKNIFYIYYTLYLIYLKLKLKYNN 154


>UniRef50_A5K4U0 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 2266

 Score = 31.9 bits (69), Expect = 7.9
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = -1

Query: 325  NKKCFLLLYDSHVIAFIYENTPKQLKGQVSGVALTSLEKKKSMTRKLKIKTFF 167
            +K+CFL+ Y S +  FIY+N   Q K   S   L  L++     +   I   F
Sbjct: 1671 SKRCFLITYMSGIQKFIYDNVSDQDKWDASVHPLLLLDENNFFLKDFNISEKF 1723


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 439,742,259
Number of Sequences: 1657284
Number of extensions: 7665982
Number of successful extensions: 19190
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19178
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 28130105105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)