Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20187
         (487 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.36 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    24   0.84 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   1.9  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   5.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.36
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = -2

Query: 351 LIYVFYLLLIKNVFYYYMTHML 286
           +++  +LLL+  ++Y+Y  H+L
Sbjct: 246 ILFTVHLLLLVCIYYFYYMHLL 267



 Score = 21.0 bits (42), Expect = 5.9
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -2

Query: 345 YVFYLLLIKNVFYYYMTHMLLHL 277
           Y F +LL    FYY      +HL
Sbjct: 105 YAFIILLCVYYFYYAFIIFTVHL 127


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.8 bits (49), Expect = 0.84
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 347 IRLKNYTFLIIIILFVRYFHSIY 415
           +R K YT + I I+   Y HS Y
Sbjct: 23  LRFKLYTIVHIFIIIALYAHSSY 45


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -2

Query: 396 RTNKMIIIKNV*FFNLIYVFYLLLIKNVFYY 304
           +T +  ++K   + N I +FYL +   + YY
Sbjct: 309 KTGRKTVLKTNKYCNFIILFYLSVFVILVYY 339


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 361 LYIFNYYHFICSVF 402
           LY FNYY  + + F
Sbjct: 75  LYCFNYYVIVVTTF 88


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,725
Number of Sequences: 336
Number of extensions: 2411
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11315916
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)